BLASTX nr result

ID: Coptis25_contig00015580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015580
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327028.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-13
ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-...    69   1e-12
ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-...    69   1e-12
ref|XP_002301236.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-12
ref|XP_002526467.1| ELMO domain-containing protein, putative [Ri...    69   3e-12

>ref|XP_002327028.1| predicted protein [Populus trichocarpa] gi|222835343|gb|EEE73778.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 72.4 bits (176), Expect(2) = 1e-13
 Identities = 45/106 (42%), Positives = 52/106 (49%)
 Frame = +1

Query: 1   QEACLQN*QRHVGVTYDGSNPDHLEGLEALGNVSFPEEELHG*LSEQWKEXXXXXXXXXX 180
           QE CLQ  Q  + V YD S P+H E L+AL N +FPEEELHG +SEQ             
Sbjct: 66  QEECLQRLQSRIDVAYDSSVPEHQEALKALWNAAFPEEELHGLISEQ------------- 112

Query: 181 XXXXXXXXXXXXXXXXSEQWKEMV*QGKDSVTDFRGGVNISGEFII 318
                              WKEM  QGKD  TDFRGG  IS E ++
Sbjct: 113 -------------------WKEMGWQGKDPSTDFRGGGFISLENLL 139



 Score = 28.5 bits (62), Expect(2) = 1e-13
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 296 ISLENLLFFARTYP 337
           ISLENLLFFAR +P
Sbjct: 133 ISLENLLFFARNFP 146


>ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]
          Length = 266

 Score = 68.9 bits (167), Expect(2) = 1e-12
 Identities = 42/106 (39%), Positives = 51/106 (48%)
 Frame = +1

Query: 1   QEACLQN*QRHVGVTYDGSNPDHLEGLEALGNVSFPEEELHG*LSEQWKEXXXXXXXXXX 180
           QE CLQ  Q  + + YDGS P+H + L AL + +FPEEELHG +SE              
Sbjct: 65  QEECLQRLQNRIDIPYDGSIPEHQDALRALWSAAFPEEELHGLISE-------------- 110

Query: 181 XXXXXXXXXXXXXXXXSEQWKEMV*QGKDSVTDFRGGVNISGEFII 318
                             QWK M  QGKD  TDFRGG  IS E ++
Sbjct: 111 ------------------QWKNMGWQGKDPSTDFRGGGFISLENLL 138



 Score = 28.5 bits (62), Expect(2) = 1e-12
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 296 ISLENLLFFARTYP 337
           ISLENLLFFAR +P
Sbjct: 132 ISLENLLFFARNFP 145


>ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]
          Length = 266

 Score = 68.9 bits (167), Expect(2) = 1e-12
 Identities = 42/106 (39%), Positives = 51/106 (48%)
 Frame = +1

Query: 1   QEACLQN*QRHVGVTYDGSNPDHLEGLEALGNVSFPEEELHG*LSEQWKEXXXXXXXXXX 180
           QE CLQ  Q  + + YDGS P+H + L  L N +FPEEELHG +SEQ             
Sbjct: 65  QEECLQRLQSRIDIPYDGSVPEHQDALRDLWNAAFPEEELHGLISEQ------------- 111

Query: 181 XXXXXXXXXXXXXXXXSEQWKEMV*QGKDSVTDFRGGVNISGEFII 318
                              WK+M  QGKD  TDFRGG  IS E ++
Sbjct: 112 -------------------WKDMGWQGKDPSTDFRGGGFISLENLL 138



 Score = 28.5 bits (62), Expect(2) = 1e-12
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 296 ISLENLLFFARTYP 337
           ISLENLLFFAR +P
Sbjct: 132 ISLENLLFFARNFP 145


>ref|XP_002301236.1| predicted protein [Populus trichocarpa] gi|222842962|gb|EEE80509.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 68.2 bits (165), Expect(2) = 2e-12
 Identities = 44/106 (41%), Positives = 50/106 (47%)
 Frame = +1

Query: 1   QEACLQN*QRHVGVTYDGSNPDHLEGLEALGNVSFPEEELHG*LSEQWKEXXXXXXXXXX 180
           QE CLQ  Q  + V YD S  DH E L+ L N +FPEEELHG +SEQ             
Sbjct: 66  QEECLQRLQSRIDVPYDSSVLDHQEALKTLWNAAFPEEELHGLISEQ------------- 112

Query: 181 XXXXXXXXXXXXXXXXSEQWKEMV*QGKDSVTDFRGGVNISGEFII 318
                              WKEM  QGKD  TDFRGG  IS E ++
Sbjct: 113 -------------------WKEMGWQGKDPSTDFRGGGFISLENLL 139



 Score = 28.5 bits (62), Expect(2) = 2e-12
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 296 ISLENLLFFARTYP 337
           ISLENLLFFAR +P
Sbjct: 133 ISLENLLFFARNFP 146


>ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis]
           gi|223534142|gb|EEF35858.1| ELMO domain-containing
           protein, putative [Ricinus communis]
          Length = 267

 Score = 68.9 bits (167), Expect(2) = 3e-12
 Identities = 44/106 (41%), Positives = 50/106 (47%)
 Frame = +1

Query: 1   QEACLQN*QRHVGVTYDGSNPDHLEGLEALGNVSFPEEELHG*LSEQWKEXXXXXXXXXX 180
           QE CLQ  Q  + V YD S P+H E L AL N +FPEEEL G +SEQ             
Sbjct: 66  QEECLQRLQSRIDVAYDSSIPEHQEALRALWNAAFPEEELRGLISEQ------------- 112

Query: 181 XXXXXXXXXXXXXXXXSEQWKEMV*QGKDSVTDFRGGVNISGEFII 318
                              WKEM  QGKD  TDFRGG  IS E ++
Sbjct: 113 -------------------WKEMGWQGKDPSTDFRGGGFISLENLL 139



 Score = 27.3 bits (59), Expect(2) = 3e-12
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 296 ISLENLLFFARTYP 337
           ISLENLLFFA+ +P
Sbjct: 133 ISLENLLFFAKNFP 146


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