BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015568
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric...   417   e-114
ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis v...   412   e-113
ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   410   e-112
ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   409   e-112

>ref|XP_002300852.1| predicted protein [Populus trichocarpa] gi|222842578|gb|EEE80125.1|
           predicted protein [Populus trichocarpa]
          Length = 758

 Score =  423 bits (1087), Expect = e-116
 Identities = 202/246 (82%), Positives = 228/246 (92%)
 Frame = -3

Query: 739 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 560
           MKFQIE++TVYFPYDHIYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDHIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYT 60

Query: 559 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 380
           +SKPQ  IKL+YCTRTVHEMEKTLAEL+LL+ YQVKHLG +A+ILAIGLSSRKNLCVNPN
Sbjct: 61  ISKPQGAIKLIYCTRTVHEMEKTLAELKLLHNYQVKHLGPAAKILAIGLSSRKNLCVNPN 120

Query: 379 VVSGSTRDSVDAGCRKRTASWVRELASTNPNIETCQFFDNFDRMGSDNYVLPAGVYTLQD 200
           V+  + RDSVDA CRKRTASWVR LA+ NPN+ETC+FF+N++R  S   VLP GVYTLQD
Sbjct: 121 VLEANNRDSVDAACRKRTASWVRALAAENPNVETCEFFENYERAAS-GAVLPPGVYTLQD 179

Query: 199 LRSFGKEKGWCPYYLARRMVRLANVVVYSYQYLLDPKVSGIISQEMQRECVVVFDEAHNI 20
           LR++GKEKGWCPY+LAR MV+LANVVVYSYQYLLDPKV+GIIS+EMQ+E VVVFDEAHNI
Sbjct: 180 LRAYGKEKGWCPYFLARHMVQLANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239

Query: 19  DNVCIE 2
           DNVCIE
Sbjct: 240 DNVCIE 245


>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
           gi|223540142|gb|EEF41719.1| DNA repair helicase
           rad3/xp-d, putative [Ricinus communis]
          Length = 758

 Score =  417 bits (1072), Expect = e-114
 Identities = 198/246 (80%), Positives = 227/246 (92%)
 Frame = -3

Query: 739 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 560
           MKFQIE++TVYFPYD+IYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSYS
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMIELKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 60

Query: 559 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 380
           LSKPQ+P+KL+YCTRTVHEMEKTLAEL+LL+ YQ+KHLG +A+ILAIGLSSRKNLCVNP 
Sbjct: 61  LSKPQSPVKLIYCTRTVHEMEKTLAELKLLHNYQIKHLGPAARILAIGLSSRKNLCVNPR 120

Query: 379 VVSGSTRDSVDAGCRKRTASWVRELASTNPNIETCQFFDNFDRMGSDNYVLPAGVYTLQD 200
           V++   RDSVDAGCRK TASW+R +A+ NPNI TC+FF+N++R  S   VLP GVYTLQD
Sbjct: 121 VLAAENRDSVDAGCRKLTASWMRAMAAENPNIPTCEFFENYERAAS-AAVLPPGVYTLQD 179

Query: 199 LRSFGKEKGWCPYYLARRMVRLANVVVYSYQYLLDPKVSGIISQEMQRECVVVFDEAHNI 20
           LR++GKEKGWCPY+LAR MV+ ANVVVYSYQYLLDPKV+GIIS+EMQ+E VVVFDEAHNI
Sbjct: 180 LRTYGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239

Query: 19  DNVCIE 2
           DNVCIE
Sbjct: 240 DNVCIE 245


>ref|XP_002277634.1| PREDICTED: DNA repair helicase UVH6 [Vitis vinifera]
          Length = 758

 Score =  412 bits (1060), Expect = e-113
 Identities = 199/246 (80%), Positives = 224/246 (91%)
 Frame = -3

Query: 739 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 560
           MKFQIE++TVYFPYD+IYPEQYSYM++LKRALDAKGH LLEMPTGTGKTIALLSLITSY+
Sbjct: 1   MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHALLEMPTGTGKTIALLSLITSYA 60

Query: 559 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 380
           LSKP  PIKLLYCTRTVHEMEKTLAELRLL+ YQ++HLG +A+ILA+GLSSRKNLC+NP 
Sbjct: 61  LSKPSNPIKLLYCTRTVHEMEKTLAELRLLHQYQLRHLGPAARILALGLSSRKNLCINPA 120

Query: 379 VVSGSTRDSVDAGCRKRTASWVRELASTNPNIETCQFFDNFDRMGSDNYVLPAGVYTLQD 200
           VVS   RDSVDAGCRK TASWVR LA  NPNI TCQFF+N+++  S+  VLP GVYTLQD
Sbjct: 121 VVSAENRDSVDAGCRKLTASWVRALAVENPNIPTCQFFENYEKAASE-AVLPPGVYTLQD 179

Query: 199 LRSFGKEKGWCPYYLARRMVRLANVVVYSYQYLLDPKVSGIISQEMQRECVVVFDEAHNI 20
           LR+FG++KGWCPY+LAR MV+ ANVVVYSYQYLLDPKV+GIIS+EMQRE VVVFDEAHNI
Sbjct: 180 LRAFGRDKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRESVVVFDEAHNI 239

Query: 19  DNVCIE 2
           DNVCIE
Sbjct: 240 DNVCIE 245


>ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  410 bits (1053), Expect = e-112
 Identities = 196/246 (79%), Positives = 224/246 (91%)
 Frame = -3

Query: 739 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 560
           MKF+IE+ITVYFPYD+IYPEQYSYM++LKRALDAKGHCLLEMPTGTGKTIALLSLITSY 
Sbjct: 1   MKFEIEDITVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV 60

Query: 559 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 380
           LSKP +P+KLLYCTRTVHEMEKTLAELRLL+ YQ++HLG +A+ILA+GLSSRKNLCVNP 
Sbjct: 61  LSKPHSPLKLLYCTRTVHEMEKTLAELRLLHDYQLRHLGPAAKILALGLSSRKNLCVNPR 120

Query: 379 VVSGSTRDSVDAGCRKRTASWVRELASTNPNIETCQFFDNFDRMGSDNYVLPAGVYTLQD 200
           V++   RDSVDAGCRK TASWVR +A+ NP + TC+FF+ ++R GS + VLP GVYTLQD
Sbjct: 121 VLAAENRDSVDAGCRKLTASWVRAVAAENPGVPTCEFFEQYERAGS-SAVLPPGVYTLQD 179

Query: 199 LRSFGKEKGWCPYYLARRMVRLANVVVYSYQYLLDPKVSGIISQEMQRECVVVFDEAHNI 20
           LR +GKEKGWCPYYLAR MV+ ANVVVYSYQYLLDPKV+GIIS+EMQ+E VVVFDEAHNI
Sbjct: 180 LRVYGKEKGWCPYYLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNI 239

Query: 19  DNVCIE 2
           DNVCIE
Sbjct: 240 DNVCIE 245


>ref|XP_004158946.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
           [Cucumis sativus]
          Length = 598

 Score =  409 bits (1052), Expect = e-112
 Identities = 194/246 (78%), Positives = 224/246 (91%)
 Frame = -3

Query: 739 MKFQIEEITVYFPYDHIYPEQYSYMLDLKRALDAKGHCLLEMPTGTGKTIALLSLITSYS 560
           MKFQ+E++TVYFPYDHIYPEQY+YML+LKRALDAKGHCLLEMPTGTG TIALLSLITSY+
Sbjct: 1   MKFQLEDVTVYFPYDHIYPEQYAYMLELKRALDAKGHCLLEMPTGTGXTIALLSLITSYA 60

Query: 559 LSKPQTPIKLLYCTRTVHEMEKTLAELRLLYTYQVKHLGESAQILAIGLSSRKNLCVNPN 380
           LSKPQ P+KL+YCTRTVHEMEKTLAELRLL+ YQV+ LG  AQILA+GLSSRKNLCVNPN
Sbjct: 61  LSKPQNPVKLIYCTRTVHEMEKTLAELRLLHDYQVQQLGPRAQILAVGLSSRKNLCVNPN 120

Query: 379 VVSGSTRDSVDAGCRKRTASWVRELASTNPNIETCQFFDNFDRMGSDNYVLPAGVYTLQD 200
           V++  +RDSVDAGCRK TASWVR +A+ NP++ TC+FF+ +++ GS + VLP GVYTLQD
Sbjct: 121 VLASESRDSVDAGCRKLTASWVRAMAAENPDVPTCEFFEQYEKAGS-SAVLPPGVYTLQD 179

Query: 199 LRSFGKEKGWCPYYLARRMVRLANVVVYSYQYLLDPKVSGIISQEMQRECVVVFDEAHNI 20
           LR+FG +KGWCPY+LAR MV+ ANVVVYSYQYLLDPKV+ IIS+EMQRE VVVFDEAHNI
Sbjct: 180 LRAFGTKKGWCPYFLARHMVQFANVVVYSYQYLLDPKVASIISKEMQRESVVVFDEAHNI 239

Query: 19  DNVCIE 2
           DNVCIE
Sbjct: 240 DNVCIE 245