BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015564
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...    65   7e-09
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...    65   7e-09
ref|XP_002325232.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_004156639.1| PREDICTED: F-box protein CPR30-like [Cucumis...    64   1e-08
ref|XP_002448062.1| hypothetical protein SORBIDRAFT_06g020373 [S...    61   8e-08

>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 52/151 (34%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
 Frame = -2

Query: 463 NDDLVGEIMLHLPPIYVLRFKMVCKKWHRIITNPSFRRRHTLYFHRYSLSRFLPSILLQD 284
           NDDL  +I+L LP   +LRFK V K+W  +I+NP+F  R T+  H        PS +   
Sbjct: 19  NDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPT----PSGIFFP 74

Query: 283 HKAANSLKAGEPLSLLLNRDDRWRAPSLIPNPAFDFVVNWDIVMSKGAFKILHSCNGLLL 104
                S     P   +    +  R P   P+ A D          K  F IL SCNGL L
Sbjct: 75  RPTPKS----PPFDFINFTTNPSRPPFESPHFADD----------KHGFLILQSCNGLFL 120

Query: 103 ---YNSSQFLNQSTGEVFVCNPLTKEYIKLP 20
              YN     N ST + ++ NP T  + KLP
Sbjct: 121 CSTYNG----NYSTRDFYIHNPTTNHHTKLP 147


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 52/151 (34%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
 Frame = -2

Query: 463 NDDLVGEIMLHLPPIYVLRFKMVCKKWHRIITNPSFRRRHTLYFHRYSLSRFLPSILLQD 284
           NDDL  +I+L LP   +LRFK V K+W  +I+NP+F  R T+  H        PS +   
Sbjct: 19  NDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPT----PSGIFFP 74

Query: 283 HKAANSLKAGEPLSLLLNRDDRWRAPSLIPNPAFDFVVNWDIVMSKGAFKILHSCNGLLL 104
                S     P   +    +  R P   P+ A D          K  F IL SCNGL L
Sbjct: 75  RPTPKS----PPFDFINFTTNPSRPPFESPHFADD----------KHGFLILQSCNGLFL 120

Query: 103 ---YNSSQFLNQSTGEVFVCNPLTKEYIKLP 20
              YN     N ST + ++ NP T  + KLP
Sbjct: 121 CSTYNG----NYSTRDFYIHNPTTNHHTKLP 147


>ref|XP_002325232.1| predicted protein [Populus trichocarpa] gi|222866666|gb|EEF03797.1|
           predicted protein [Populus trichocarpa]
          Length = 431

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
 Frame = -2

Query: 463 NDDLVGEIMLHLPPIYVLRFKMVCKKWHRIITNPSFRRRHTLYFHRYSLSRFLPSILLQD 284
           NDD VGEI+LHLP   VL+ K++ K+W  II++PSF  RHT Y + +++S  L ++    
Sbjct: 30  NDDFVGEILLHLPVKTVLKLKLISKRWLSIISHPSFAIRHT-YLNPHTISGLLLNVAYHF 88

Query: 283 HKAANSLKAGEPLSLLLNRDDRWRAPSLIPNPAFDFVVNWDIVMSKGAFKILHSCNGLLL 104
            K         P S L    D       + N + DF + +D     G+  +  SCNGLLL
Sbjct: 89  KK---------PSSYLYVSID----GKSVVNVSSDF-LRFD-PDKPGSTYVSQSCNGLLL 133

Query: 103 YNSSQFLNQSTGE---VFVCNPLTKEYIKL 23
            +     + +  +    +V NP T+++++L
Sbjct: 134 CSKRMRYSAARTKPTYYYVFNPTTRQFVEL 163


>ref|XP_004156639.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 243

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
 Frame = -2

Query: 457 DLVGEIMLHLPPIYVLRFKMVCKKWHRIITNPSFRRRHTLYFHRYSLSRFLPSILLQDHK 278
           D+V  I+  LPP  +LRFK VCK W+ +I +P F  +H L    +        +LL+   
Sbjct: 6   DVVIHILSKLPPESLLRFKSVCKTWYALINDPKFVTKHLLDSSPHK------HVLLKRII 59

Query: 277 AANSLKAGEPLSLLLNRDDRWRAPSL-IPNPAFDFVVNWDIVMSKGAFKILHSCNGLLLY 101
             NS K     SLL    DR  +  L IP P  D   N        A +I    +GL+  
Sbjct: 60  INNSGKKEHVFSLLKFSLDRSVSSILDIPLPLIDHEDN-------PALRISGHSHGLIC- 111

Query: 100 NSSQFLNQSTGEVFVCNPLTKEYIKLPSYV 11
                L+ ST ++F+CNP+T+++ KLP  V
Sbjct: 112 -----LSDSTPDIFLCNPMTRQFRKLPPTV 136


>ref|XP_002448062.1| hypothetical protein SORBIDRAFT_06g020373 [Sorghum bicolor]
           gi|241939245|gb|EES12390.1| hypothetical protein
           SORBIDRAFT_06g020373 [Sorghum bicolor]
          Length = 394

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
 Frame = -2

Query: 463 NDDLVGEIMLHLPPIYVLRFKMVCKKWHRIITNPSFRRRHTLYFHRYSLSRFLPSILLQD 284
           +DD+  EI++ LP   VLRF+ VCK W  I T P F   H     R   ++ +    L  
Sbjct: 13  SDDICAEILVRLPVKSVLRFRAVCKAWRDITTRPLFLAAHA----RRQPAKVVLYTYLST 68

Query: 283 HKAANSLKAGEPLSLL--LNRDDRWRAPSLIPNPAFDFVVNWDIVMSKGAFKILHSCNGL 110
             A +    G  L +L         +   LI  P         +++S     +L SCNG+
Sbjct: 69  RSAQHGYAVGIALDVLPVSGETAAGQRRRLIRYPR-------SVLLSSMDPLLLDSCNGV 121

Query: 109 LLYNSSQFLNQSTGEVFVCNPLTKEYIKLPSYV 11
           LL     F   + G  F+CNP+T+++ +LP  +
Sbjct: 122 LL-----FRTDAAGIYFLCNPVTRQWAELPKLI 149