BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015561
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Ze...   122   4e-26
gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indi...   120   9e-26
ref|NP_001049077.1| Os03g0166800 [Oryza sativa Japonica Group] g...   120   9e-26
gb|ABF94166.1| Endonuclease/Exonuclease/phosphatase family prote...   120   9e-26
ref|XP_001785029.1| predicted protein [Physcomitrella patens sub...   120   1e-25

>ref|NP_001147019.1| CCR4-NOT transcription complex subunit 6 [Zea mays]
           gi|195606510|gb|ACG25085.1| CCR4-NOT transcription
           complex subunit 6 [Zea mays]
           gi|414865007|tpg|DAA43564.1| TPA: CCR4-NOT transcription
           complex subunit 6 [Zea mays]
          Length = 620

 Score =  122 bits (305), Expect = 4e-26
 Identities = 67/122 (54%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 SAAHDLLLKAKVDLNLVDLANDPLGLCRRM-KLSHDMPLVSAYASFLTADSSDPLLEKQR 184
           S +H LL + KVD    DLA DPLG+ R + KL+H +PLVSAY+SF++       L+ QR
Sbjct: 484 STSHGLLARGKVDHLHPDLAIDPLGILRPLSKLTHQLPLVSAYSSFVSMAGVGYDLDHQR 543

Query: 183 ENMNSESGEPRFTNFTKAFSGTLDYIFYTANRFTVKGLLELLALESV-ENTALPSPEWSS 7
             M+  + EP FTN T+ F+GTLDYIFYTA+  TV+ LLELL  +S+ ++TALPSPEWSS
Sbjct: 544 RRMDPGTNEPLFTNCTRDFTGTLDYIFYTADSLTVESLLELLDEDSLRKDTALPSPEWSS 603

Query: 6   DH 1
           DH
Sbjct: 604 DH 605


>gb|EAY88687.1| hypothetical protein OsI_10162 [Oryza sativa Indica Group]
          Length = 607

 Score =  120 bits (302), Expect = 9e-26
 Identities = 67/122 (54%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 SAAHDLLLKAKVDLNLVDLANDPLGLCR-RMKLSHDMPLVSAYASFLTADSSDPLLEKQR 184
           S  H LL   KVDL   DLA DPLG+ R   KL+H +PLVSAY+SF     +   LE QR
Sbjct: 471 STPHGLLAMGKVDLMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQR 530

Query: 183 ENMNSESGEPRFTNFTKAFSGTLDYIFYTANRFTVKGLLELLALESV-ENTALPSPEWSS 7
             M+  + EP FTN T+ F+GT+DYIFYTA+  +V+ LLELL  +S+ ++TALPSPEWSS
Sbjct: 531 RRMDPATNEPLFTNCTRDFTGTIDYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSS 590

Query: 6   DH 1
           DH
Sbjct: 591 DH 592


>ref|NP_001049077.1| Os03g0166800 [Oryza sativa Japonica Group]
           gi|108706369|gb|ABF94164.1|
           Endonuclease/Exonuclease/phosphatase family protein,
           expressed [Oryza sativa Japonica Group]
           gi|108706370|gb|ABF94165.1|
           Endonuclease/Exonuclease/phosphatase family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113547548|dbj|BAF10991.1| Os03g0166800 [Oryza sativa
           Japonica Group] gi|125585049|gb|EAZ25713.1| hypothetical
           protein OsJ_09546 [Oryza sativa Japonica Group]
          Length = 607

 Score =  120 bits (302), Expect = 9e-26
 Identities = 67/122 (54%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 SAAHDLLLKAKVDLNLVDLANDPLGLCR-RMKLSHDMPLVSAYASFLTADSSDPLLEKQR 184
           S  H LL   KVDL   DLA DPLG+ R   KL+H +PLVSAY+SF     +   LE QR
Sbjct: 471 STPHGLLAMGKVDLMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQR 530

Query: 183 ENMNSESGEPRFTNFTKAFSGTLDYIFYTANRFTVKGLLELLALESV-ENTALPSPEWSS 7
             M+  + EP FTN T+ F+GT+DYIFYTA+  +V+ LLELL  +S+ ++TALPSPEWSS
Sbjct: 531 RRMDPATNEPLFTNCTRDFTGTIDYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSS 590

Query: 6   DH 1
           DH
Sbjct: 591 DH 592


>gb|ABF94166.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
          Length = 605

 Score =  120 bits (302), Expect = 9e-26
 Identities = 67/122 (54%), Positives = 84/122 (68%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 SAAHDLLLKAKVDLNLVDLANDPLGLCR-RMKLSHDMPLVSAYASFLTADSSDPLLEKQR 184
           S  H LL   KVDL   DLA DPLG+ R   KL+H +PLVSAY+SF     +   LE QR
Sbjct: 469 STPHGLLAMGKVDLMHPDLAIDPLGILRPASKLTHQLPLVSAYSSFARMVGAGYDLEHQR 528

Query: 183 ENMNSESGEPRFTNFTKAFSGTLDYIFYTANRFTVKGLLELLALESV-ENTALPSPEWSS 7
             M+  + EP FTN T+ F+GT+DYIFYTA+  +V+ LLELL  +S+ ++TALPSPEWSS
Sbjct: 529 RRMDPATNEPLFTNCTRDFTGTIDYIFYTADSLSVESLLELLDEDSLRKDTALPSPEWSS 588

Query: 6   DH 1
           DH
Sbjct: 589 DH 590


>ref|XP_001785029.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162663378|gb|EDQ50144.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 561

 Score =  120 bits (300), Expect = 1e-25
 Identities = 66/122 (54%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = -1

Query: 360 SAAHDLLLKAKVDLNLVDLANDPLGLCR-RMKLSHDMPLVSAYASFLTADSSDPLLEKQR 184
           SA H LL    VD +  DL  DPL + R   KL H +PLVSAY SF   +  DP +EKQR
Sbjct: 425 SAPHCLLSTGHVDPSHPDLQVDPLNILRPASKLCHSLPLVSAYESFARMNGIDPTVEKQR 484

Query: 183 ENMNSESGEPRFTNFTKAFSGTLDYIFYTANRFTVKGLLELLALESV-ENTALPSPEWSS 7
             M+  + EP+FTN T+ F GTLDYIFYT +  TV+ LLELL  +++ ++TALPSPEWSS
Sbjct: 485 RRMDLTTSEPQFTNCTRDFLGTLDYIFYTVDSLTVESLLELLDEDTLRKDTALPSPEWSS 544

Query: 6   DH 1
           DH
Sbjct: 545 DH 546