BLASTX nr result

ID: Coptis25_contig00015559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015559
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61816.1| conserved oligomeric Golgi complex component [Ci...   339   8e-91
ref|XP_004141327.1| PREDICTED: conserved oligomeric Golgi comple...   338   2e-90
ref|XP_003629209.1| Conserved oligomeric Golgi complex subunit [...   332   1e-88
ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|2...   332   1e-88
ref|XP_002516094.1| Conserved oligomeric Golgi complex component...   330   4e-88

>dbj|BAK61816.1| conserved oligomeric Golgi complex component [Citrus unshiu]
          Length = 568

 Score =  339 bits (869), Expect = 8e-91
 Identities = 170/244 (69%), Positives = 198/244 (81%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFSKNMCTAVENFQIVLDSYRWVPLPAVGFPAN 181
            YCAMGLG VGLDFRGLLPPLFE+AV  LFSKNM TAVENFQ+VLDS+RWVPLPAVG+PA+
Sbjct: 325  YCAMGLGWVGLDFRGLLPPLFEEAVLKLFSKNMSTAVENFQLVLDSHRWVPLPAVGYPAH 384

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
               +ESQEDVTPPS LMEHPPLAVF+NGVSAAMNELRPCAPLSLKHVLA+E++KGLQAVS
Sbjct: 385  SVGEESQEDVTPPSYLMEHPPLAVFINGVSAAMNELRPCAPLSLKHVLAEELIKGLQAVS 444

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLITDLQSSFNGV 541
            DSLLRY+ TRMLR NES LFLSLCRAFIEV  PHC TCFGRCYPGGA LI D +S ++G+
Sbjct: 445  DSLLRYSTTRMLRENESGLFLSLCRAFIEVAYPHCATCFGRCYPGGAALIMDAKSLYDGL 504

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDSTAQ 721
             RL   SP++ELPK  + A+ + I EN GD   ++NG +P AE+    + D   ++   Q
Sbjct: 505  GRLSTHSPSRELPKPVNDADGKTITEN-GDLPVVENGVNPAAEETEGTNVDE--KEQPLQ 561

Query: 722  TNEE 733
            T E+
Sbjct: 562  TEEK 565


>ref|XP_004141327.1| PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Cucumis
            sativus] gi|449525202|ref|XP_004169607.1| PREDICTED:
            conserved oligomeric Golgi complex subunit 8-like
            [Cucumis sativus]
          Length = 570

 Score =  338 bits (866), Expect = 2e-90
 Identities = 167/246 (67%), Positives = 198/246 (80%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFSKNMCTAVENFQIVLDSYRWVPLPAVGFPAN 181
            YCAMGLG VG+DFRGLLPPLFE+AV NLFSKNM TAV+NFQ+VLDS+RWVPLPAVGFPA+
Sbjct: 325  YCAMGLGWVGMDFRGLLPPLFEEAVLNLFSKNMATAVDNFQLVLDSHRWVPLPAVGFPAS 384

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
               +ESQEDVTPPS LMEHPPLAVFVNGVSAAMNELR CAPLSLK V+AQE++KGLQAVS
Sbjct: 385  TIGEESQEDVTPPSYLMEHPPLAVFVNGVSAAMNELRHCAPLSLKQVIAQELIKGLQAVS 444

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLITDLQSSFNGV 541
            DSLLRYN TRML+ NES LFL LCRAFIEV  PHC TCFGRCYPGGA LI D ++ ++G+
Sbjct: 445  DSLLRYNTTRMLKDNESGLFLQLCRAFIEVAYPHCATCFGRCYPGGAMLILDAKNLYDGI 504

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDSTAQ 721
             RLL VS ++ELPK   +AEE+ I EN G+   ++NG +  A++    SP  I  +  ++
Sbjct: 505  GRLLTVSSSRELPKTVSNAEEKTITEN-GEMPALENGGTSDADKEDQKSPSLISNEKHSE 563

Query: 722  TNEERD 739
               E++
Sbjct: 564  GEAEQN 569


>ref|XP_003629209.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula]
            gi|355523231|gb|AET03685.1| Conserved oligomeric Golgi
            complex subunit [Medicago truncatula]
          Length = 599

 Score =  332 bits (851), Expect = 1e-88
 Identities = 172/260 (66%), Positives = 201/260 (77%), Gaps = 11/260 (4%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFSKNMCTAVENFQIVLDSYRWVPLPAVGFPAN 181
            YCAMGLG VGLDFRGLLPPLFE+AV NLFSKNM TAVENFQ+VL+S+RWVPLPAVGF AN
Sbjct: 326  YCAMGLGWVGLDFRGLLPPLFEEAVLNLFSKNMSTAVENFQLVLESHRWVPLPAVGFRAN 385

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
             S +ES+EDVTPPS LMEHPPLAVF+NGVSAAMNELRPCAPLSLKHVLAQE++KGLQAVS
Sbjct: 386  -SVEESKEDVTPPSYLMEHPPLAVFINGVSAAMNELRPCAPLSLKHVLAQELIKGLQAVS 444

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVV-----------CPHCTTCFGRCYPGGATL 508
            DSLL YN TR+LR NES LFLSLCRAFIEV+            PHC TCFGRCY GGATL
Sbjct: 445  DSLLLYNTTRVLRANESGLFLSLCRAFIEVLYNLVTVFFRVAYPHCATCFGRCYTGGATL 504

Query: 509  ITDLQSSFNGVARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPS 688
            ITD ++ ++G+ RL+  S A+ELPK  ++ E   I EN G+   MDNG +P A++     
Sbjct: 505  ITDAKNVYDGIRRLVEASSARELPKPVNNGEASGIAEN-GEVPKMDNGETPDAKEPDAKE 563

Query: 689  PDSIMQDSTAQTNEERDMKS 748
             ++I  +S A   +E +  S
Sbjct: 564  SEAIDTESEATNTDETNKNS 583


>ref|XP_002308543.1| predicted protein [Populus trichocarpa] gi|222854519|gb|EEE92066.1|
            predicted protein [Populus trichocarpa]
          Length = 575

 Score =  332 bits (850), Expect = 1e-88
 Identities = 171/246 (69%), Positives = 198/246 (80%), Gaps = 1/246 (0%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFSKNMCTAVENFQIVLDSYRWVPLPAVGFPAN 181
            YCA+GL  VGLDFRGLLPPLFE+AV NLFSKNM TAVENFQ+VLDS+RWVPLPAVGFP+ 
Sbjct: 325  YCAVGLNWVGLDFRGLLPPLFEEAVLNLFSKNMNTAVENFQLVLDSHRWVPLPAVGFPSY 384

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
               +E QEDVTPPS LMEHPPLAVF+NGVSAAMNELRPCAP+SLKHVLAQE++KGLQAVS
Sbjct: 385  SIGEEQQEDVTPPSYLMEHPPLAVFINGVSAAMNELRPCAPVSLKHVLAQELIKGLQAVS 444

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLITDLQSSFNGV 541
            DSLLRYNATRMLR NES LFLSLCR+FIEV  PHC TCFGRCYPGGA LI D ++ ++GV
Sbjct: 445  DSLLRYNATRMLRDNESGLFLSLCRSFIEVAYPHCATCFGRCYPGGAALIMDAKNLYDGV 504

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDS-TA 718
             RLLA S ++EL + A++ E + I EN GD   ++NG +P  E  G    D   Q S T 
Sbjct: 505  GRLLATS-SRELQRPANNTEGKKITEN-GDQLVVENGVTPEVEPSGVAIADEKDQISPTV 562

Query: 719  QTNEER 736
            Q +E++
Sbjct: 563  QIDEKQ 568


>ref|XP_002516094.1| Conserved oligomeric Golgi complex component, putative [Ricinus
            communis] gi|223544580|gb|EEF46096.1| Conserved
            oligomeric Golgi complex component, putative [Ricinus
            communis]
          Length = 574

 Score =  330 bits (846), Expect = 4e-88
 Identities = 173/257 (67%), Positives = 202/257 (78%)
 Frame = +2

Query: 2    YCAMGLGSVGLDFRGLLPPLFEDAVHNLFSKNMCTAVENFQIVLDSYRWVPLPAVGFPAN 181
            YCAMGL  VGLDFRGLLP LFE+AV NLFSKNM TAVENFQ+VLDS+RWVPLPAVGFP N
Sbjct: 323  YCAMGLCWVGLDFRGLLPSLFEEAVLNLFSKNMSTAVENFQLVLDSHRWVPLPAVGFPTN 382

Query: 182  GSTDESQEDVTPPSSLMEHPPLAVFVNGVSAAMNELRPCAPLSLKHVLAQEVVKGLQAVS 361
              ++E+QEDVTPPS LMEH PLAVFVNGVSAAMNELRPCAPLSLK VLAQE++KGL+AVS
Sbjct: 383  SVSEENQEDVTPPSYLMEHTPLAVFVNGVSAAMNELRPCAPLSLKFVLAQELIKGLKAVS 442

Query: 362  DSLLRYNATRMLRPNESVLFLSLCRAFIEVVCPHCTTCFGRCYPGGATLITDLQSSFNGV 541
            DSLLRYNATRMLR NES LFLSLCRAFIEV  PHC TCFGRCY GG  LI D ++ ++G+
Sbjct: 443  DSLLRYNATRMLRENESGLFLSLCRAFIEVAYPHCATCFGRCYSGGTALIMDAKNLYDGI 502

Query: 542  ARLLAVSPAKELPKRADSAEERHIIENGGDATTMDNGSSPPAEQVGTPSPDSIMQDSTAQ 721
            +RLLA SP++ELP+  ++ EE+ I EN G+   ++N  S   EQ   P P    Q   A 
Sbjct: 503  SRLLATSPSRELPRPVNNPEEKSITEN-GNLPVVENEVSTDVEQ---PQP----QGMNAA 554

Query: 722  TNEERDMKS*SIKIDSQ 772
            T +E++ KS +I  D +
Sbjct: 555  T-DEKEQKSPTIPTDEK 570


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