BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015551
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...   562   e-158
ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|2...   542   e-152
ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   538   e-150
ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   538   e-150
dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar...   536   e-150

>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score =  562 bits (1448), Expect = e-158
 Identities = 281/411 (68%), Positives = 312/411 (75%), Gaps = 3/411 (0%)
 Frame = +1

Query: 1    TGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDRPK---FVEIAAGAYHSLALQ 171
            TGDG VYSWGRGTFGRLGTG E DELFPV ++FD A+    K   FV IAAGAYHS+AL 
Sbjct: 31   TGDGRVYSWGRGTFGRLGTGSEADELFPVPIKFDSAEKSDSKGVKFVGIAAGAYHSVALA 90

Query: 172  DDGSIWCWGYNIYGQLGFNQENSLVPRFLEGFLELGSPDSLRDESSIDSKKPLKVCSVKA 351
            DDG++WCWGYN       + +N LVP  LE FL LGS  SL DES   +K PLKV +VKA
Sbjct: 91   DDGTVWCWGYN---SCILSDDNCLVPHLLELFLGLGSLGSLTDESDTKNKTPLKVNAVKA 147

Query: 352  GGMMSLAIDSLGALWIWGNYPPQSHSGDGEFSHISSSAPLPVWEFHGHTVVKVACGNEHV 531
            GGMMSLAID+LG LW+WGN P +S    GEFS +SS  P+PVW+FHGHTVVKVACGNEHV
Sbjct: 148  GGMMSLAIDNLGGLWMWGNVP-ESSPDKGEFSLVSSFTPIPVWDFHGHTVVKVACGNEHV 206

Query: 532  VALVSAEETFTGGDLICYSWGNNNHRQLGLGDRENRLRPEIVKTFNRECPWEVYEVACGA 711
            VALVS  ET+ GGDLICYSWGNN H QLGLGD ENRLRPE+VKTFN E  WEVYEVACGA
Sbjct: 207  VALVSHGETYKGGDLICYSWGNNGHGQLGLGDTENRLRPEVVKTFNLESLWEVYEVACGA 266

Query: 712  FHTAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNGQLGHGTTNSTYLPEPVKD 891
            FHTA+LT KK   + +             ES+CWTFGLGDNGQLGHGTT    LPEPVKD
Sbjct: 267  FHTALLTHKKRPSDTL-------------ESMCWTFGLGDNGQLGHGTTKGISLPEPVKD 313

Query: 892  LPPDVFLISVDCGLFHTFVVSSAGDVWSWGMEKGLGLCPDASFTGTDAGDALSPLWIPCN 1071
            LP   FL+SVDCGLFHT VVSSAG+VWSWGMEKGLGLCPDASFTGTD GDA SPL     
Sbjct: 314  LPEHRFLVSVDCGLFHTSVVSSAGEVWSWGMEKGLGLCPDASFTGTDPGDAPSPLL---- 369

Query: 1072 EYGSKFVDPLQVVCGAAHTIIVAHSGYGLWASGTGRNGALGSGNTADSYAP 1224
             YGSKF DP+QV CGAAHT++VA  GY LW+ G GR+G LG+G T D +AP
Sbjct: 370  -YGSKFRDPVQVACGAAHTVLVADDGYKLWSWGRGRSGVLGNGKTVDCFAP 419


>ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|222865652|gb|EEF02783.1|
            predicted protein [Populus trichocarpa]
          Length = 561

 Score =  542 bits (1396), Expect = e-152
 Identities = 263/409 (64%), Positives = 307/409 (75%), Gaps = 1/409 (0%)
 Frame = +1

Query: 1    TGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDRPKFVEIAAGAYHSLALQDDG 180
            TGDG VYSWG+G FGRLGTG E DELFPV+V+F+     R  FV +AAGAYHSLAL DDG
Sbjct: 25   TGDGRVYSWGKGMFGRLGTGSEVDELFPVQVKFETCVEKRLNFVGVAAGAYHSLALADDG 84

Query: 181  SIWCWGYNIYGQLGFNQENSLVPRFLEGFLELGSPDSLRDESSIDSKKPLKVCSVKAGGM 360
            S+WCWGYNIYGQLG + EN  +P  ++ FLELGS  SL D S   S+ PLK+CS+KAGGM
Sbjct: 85   SVWCWGYNIYGQLGVSGENYSMPHLMDQFLELGSLGSLIDHSETKSEGPLKICSIKAGGM 144

Query: 361  MSLAIDSLGALWIWGNYPPQSHSGDGEFSHISSSAPLPVWEFHGHTVVKVACGNEHVVAL 540
            MSLAID  GALW+WGN P Q +      S  SS  P+PV +FHGH+VVKVACG+EHVVAL
Sbjct: 145  MSLAIDDHGALWMWGNCPQQRNKTGSSISFESSFIPIPVRDFHGHSVVKVACGSEHVVAL 204

Query: 541  VSAEETFTGGDLICYSWGNNNHRQLGLGDRENRLRPEIVKTFNRECPWEVYEVACGAFHT 720
            VSA ET+   DL+CYSWGNNNH QLGLGDRE+R+ PEIV+ FN++  W+VYEVACGA+HT
Sbjct: 205  VSAGETYKVEDLVCYSWGNNNHGQLGLGDRESRVHPEIVEMFNKDSSWDVYEVACGAYHT 264

Query: 721  AVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNGQLGHGTTNSTYLPEPVKDLPP 900
            A+LTRK+               +   ES+CWTFGLGDNGQLGHGTT S   PEPVK+LP 
Sbjct: 265  ALLTRKR-------------RTVDPLESVCWTFGLGDNGQLGHGTTQSVLKPEPVKELPG 311

Query: 901  DVFLISVDCGLFHTFVVSSAGDVWSWGMEKGLGLCPDASFTGTDAGDALSPLWIP-CNEY 1077
               LISVDCGLFHT VVSS GDVWSWGMEKGLGLCPDASFTGTDAGDA SPL +      
Sbjct: 312  QAHLISVDCGLFHTSVVSSVGDVWSWGMEKGLGLCPDASFTGTDAGDAASPLLMSGYGVD 371

Query: 1078 GSKFVDPLQVVCGAAHTIIVAHSGYGLWASGTGRNGALGSGNTADSYAP 1224
            G  F +P+QV CGAAHT++VA+ GY LW+ G G +G LG+G T + +AP
Sbjct: 372  GPIFHNPIQVACGAAHTVLVANDGYKLWSWGRGTSGVLGNGKTINCFAP 420


>ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 581

 Score =  538 bits (1386), Expect = e-150
 Identities = 258/410 (62%), Positives = 307/410 (74%), Gaps = 2/410 (0%)
 Frame = +1

Query: 1    TGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDRPKFVEIAAGAYHSLALQDDG 180
            TGDG VYSWGRG FGRLGTG E DELFPVRV+    + +  K V IAAG+YHSLAL DDG
Sbjct: 31   TGDGRVYSWGRGMFGRLGTGAESDELFPVRVKLGSGE-ENLKVVAIAAGSYHSLALTDDG 89

Query: 181  SIWCWGYNIYGQLGFNQENSLVPRFLEGFLELGSPDSLRDESSIDSKKPLKVCSVKAGGM 360
            S+WCWGYNIYGQLGF+  NS  P  L+ FLEL  P+SL +ES   SK  LK+C +KAGG 
Sbjct: 90   SVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTEESGSKSKGSLKICDIKAGGQ 149

Query: 361  MSLAIDSLGALWIWGNYPPQSHSGDGEFSHISSSAPLPVWEFHGHTVVKVACGNEHVVAL 540
            +S AID LGALW+WGN P  S   +   S++SS  P PVWEFHGHTVVKVACGNEH+VAL
Sbjct: 150  ISFAIDDLGALWMWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVAL 209

Query: 541  VSAEETFT-GGDLICYSWGNNNHRQLGLGDRENRLRPEIVKTFNRECPWEVYEVACGAFH 717
            VS  ET+    DL+CYSWG+N+H QLGLGD+++R  P+I++TFN   PW VYEVACGAFH
Sbjct: 210  VSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFH 269

Query: 718  TAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNGQLGHGTTNSTYLPEPVKDLP 897
            TA+L+  K   + +             ES+CWTFGLG+NGQLGHGTT + +LP+PVK+LP
Sbjct: 270  TALLSHSKRPCDTL-------------ESVCWTFGLGENGQLGHGTTQNEFLPQPVKELP 316

Query: 898  PDVFLISVDCGLFHTFVVSSAGDVWSWGMEKGLGLCPDASFTGTDAGDALSPLWIPCNEY 1077
              V LISV CGLFHT VVSS GD+WSWGME+GLGLCPDASFTGT+ GDA+SPL I C+  
Sbjct: 317  QSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGT 376

Query: 1078 GS-KFVDPLQVVCGAAHTIIVAHSGYGLWASGTGRNGALGSGNTADSYAP 1224
             S KF+DP+QV CGAAHT+IVAH GY LW+ G GR+G LG+G   D + P
Sbjct: 377  ESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTP 426


>ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 571

 Score =  538 bits (1386), Expect = e-150
 Identities = 258/410 (62%), Positives = 307/410 (74%), Gaps = 2/410 (0%)
 Frame = +1

Query: 1    TGDGCVYSWGRGTFGRLGTGKEDDELFPVRVEFDKAQGDRPKFVEIAAGAYHSLALQDDG 180
            TGDG VYSWGRG FGRLGTG E DELFPVRV+    + +  K V IAAG+YHSLAL DDG
Sbjct: 31   TGDGRVYSWGRGMFGRLGTGAESDELFPVRVKLGSGE-ENLKVVAIAAGSYHSLALTDDG 89

Query: 181  SIWCWGYNIYGQLGFNQENSLVPRFLEGFLELGSPDSLRDESSIDSKKPLKVCSVKAGGM 360
            S+WCWGYNIYGQLGF+  NS  P  L+ FLEL  P+SL +ES   SK  LK+C +KAGG 
Sbjct: 90   SVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTEESGSKSKGSLKICDIKAGGQ 149

Query: 361  MSLAIDSLGALWIWGNYPPQSHSGDGEFSHISSSAPLPVWEFHGHTVVKVACGNEHVVAL 540
            +S AID LGALW+WGN P  S   +   S++SS  P PVWEFHGHTVVKVACGNEH+VAL
Sbjct: 150  ISFAIDDLGALWMWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVAL 209

Query: 541  VSAEETFT-GGDLICYSWGNNNHRQLGLGDRENRLRPEIVKTFNRECPWEVYEVACGAFH 717
            VS  ET+    DL+CYSWG+N+H QLGLGD+++R  P+I++TFN   PW VYEVACGAFH
Sbjct: 210  VSVGETYNKAEDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFH 269

Query: 718  TAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNGQLGHGTTNSTYLPEPVKDLP 897
            TA+L+  K   + +             ES+CWTFGLG+NGQLGHGTT + +LP+PVK+LP
Sbjct: 270  TALLSHSKRPCDTL-------------ESVCWTFGLGENGQLGHGTTQNEFLPQPVKELP 316

Query: 898  PDVFLISVDCGLFHTFVVSSAGDVWSWGMEKGLGLCPDASFTGTDAGDALSPLWIPCNEY 1077
              V LISV CGLFHT VVSS GD+WSWGME+GLGLCPDASFTGT+ GDA+SPL I C+  
Sbjct: 317  QSVSLISVACGLFHTSVVSSGGDLWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGT 376

Query: 1078 GS-KFVDPLQVVCGAAHTIIVAHSGYGLWASGTGRNGALGSGNTADSYAP 1224
             S KF+DP+QV CGAAHT+IVAH GY LW+ G GR+G LG+G   D + P
Sbjct: 377  ESPKFLDPVQVACGAAHTVIVAHDGYKLWSWGRGRSGVLGNGKAVDCFTP 426


>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 566

 Score =  536 bits (1381), Expect = e-150
 Identities = 263/415 (63%), Positives = 309/415 (74%), Gaps = 6/415 (1%)
 Frame = +1

Query: 1    TGDGCVYSWGRGTFGRLGTGKEDDELFPVRV----EFDKAQGDRPKFVEIAAGAYHSLAL 168
            TGDG VYSWGRGTFGRLGTG+E D   P  V        A   RP+FV +AAGAYHSLAL
Sbjct: 19   TGDGEVYSWGRGTFGRLGTGREADVHVPTAVLPAVAAAAAGRPRPRFVAVAAGAYHSLAL 78

Query: 169  QDDGSIWCWGYNIYGQLGFNQENSLVPRFLEGFLELGSPDSLRDESSID-SKKPLKVCSV 345
             D+GS+W WGYNIYGQLG+ +ENSL P  ++GF +LGSP++L+DE+    ++ PLK+ SV
Sbjct: 79   DDEGSLWSWGYNIYGQLGYGEENSLSPCLVDGFQDLGSPETLQDEAQDTLARTPLKLSSV 138

Query: 346  KAGGMMSLAIDSLGALWIWGNYPPQSHSGDGEFSHISSSAPLPVWEFHGHTVVKVACGNE 525
            KAGGMMS AIDSLGALW+WGN P Q+   DGEF   ++SAPLPVW+FHGHTVVKVACGNE
Sbjct: 139  KAGGMMSFAIDSLGALWMWGNCPQQTD--DGEFYIAATSAPLPVWDFHGHTVVKVACGNE 196

Query: 526  HVVALVSAEETFTGGDLICYSWGNNNHRQLGLGDRENRLRPEIVKTFNRECPWEVYEVAC 705
            HVVA VSA ET+TGGDL+CYSWGNNNH QLGLGD+E+R RP ++  F     WEVYE+AC
Sbjct: 197  HVVAAVSAGETYTGGDLVCYSWGNNNHGQLGLGDKESRSRPMLIPEFGEGSSWEVYEIAC 256

Query: 706  GAFHTAVLTRKKIHGNMIDSSHLESLELGEKESICWTFGLGDNGQLGHGTTNSTYLPEPV 885
            GA+HTAVLT KK                 + ES CWTFG+GDNGQLGHGTT +T  P+PV
Sbjct: 257  GAWHTAVLTNKKSFDQ-------------DLESRCWTFGIGDNGQLGHGTTATTCSPQPV 303

Query: 886  KDLPPDVFLISVDCGLFHTFVVSSAGDVWSWGMEKGLGLCPDASFTGTDAGDALSPLWIP 1065
              LP   FLIS+DCGLFHT VVSS G+VW WGME+GLGLCPDASF+G DAGDAL P+ + 
Sbjct: 304  DGLPTGSFLISLDCGLFHTAVVSSDGEVWCWGMERGLGLCPDASFSGMDAGDALHPIRVQ 363

Query: 1066 CNE-YGSKFVDPLQVVCGAAHTIIVAHSGYGLWASGTGRNGALGSGNTADSYAPC 1227
              E  G KF+ P+QV CGAAHT++VA  GY +WA G GR+G LG   T DSY PC
Sbjct: 364  SPETNGFKFLGPVQVACGAAHTVLVAGDGYRMWAWGRGRSGVLGRDQTTDSYTPC 418