BLASTX nr result

ID: Coptis25_contig00015534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015534
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308512.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262...    59   4e-07
emb|CBI20741.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262...    59   4e-07
emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]    59   4e-07

>ref|XP_002308512.1| predicted protein [Populus trichocarpa] gi|222854488|gb|EEE92035.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/82 (47%), Positives = 48/82 (58%)
 Frame = -1

Query: 312 TVKENKLQRLVHLSADLARQAFGILGNFQARQEINGTDGSQYVMSVREHPMYSKSRASLE 133
           TVKE  +QRLVH+SADLAR    +L NFQ        DG     +V + P   + +AS E
Sbjct: 117 TVKEKHMQRLVHMSADLARHVGVMLENFQNHITEEEMDG----RNVPQDPQSLRGKASHE 172

Query: 132 ER*QIVDLAKVGVHNRWPRHMQ 67
           ER QIV++AK GV NR    MQ
Sbjct: 173 ERLQIVNIAKNGVRNRRSHRMQ 194


>ref|XP_002282127.2| PREDICTED: uncharacterized protein LOC100262753 isoform 1 [Vitis
           vinifera]
          Length = 551

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 312 TVKENKLQRLVHLSADLARQAFGILGNFQ---ARQEINGTDGSQYVMSVREHPMYSKSRA 142
           T KE   QRLVH+SADLARQ   +L N Q     +E+N  +G Q     R+       +A
Sbjct: 278 TAKERYAQRLVHMSADLARQVGMVLENVQNGIELEEMNRENGPQDTPCPRK-------KA 330

Query: 141 SLEER*QIVDLAKVGVHNRWPRHMQ 67
           S EER +IV LAK GV NR  R+MQ
Sbjct: 331 SHEERQEIVSLAKAGVRNRRARYMQ 355


>emb|CBI20741.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 312 TVKENKLQRLVHLSADLARQAFGILGNFQ---ARQEINGTDGSQYVMSVREHPMYSKSRA 142
           T KE   QRLVH+SADLARQ   +L N Q     +E+N  +G Q     R+       +A
Sbjct: 190 TAKERYAQRLVHMSADLARQVGMVLENVQNGIELEEMNRENGPQDTPCPRK-------KA 242

Query: 141 SLEER*QIVDLAKVGVHNRWPRHMQ 67
           S EER +IV LAK GV NR  R+MQ
Sbjct: 243 SHEERQEIVSLAKAGVRNRRARYMQ 267


>ref|XP_003631811.1| PREDICTED: uncharacterized protein LOC100262753 isoform 2 [Vitis
           vinifera]
          Length = 546

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 312 TVKENKLQRLVHLSADLARQAFGILGNFQ---ARQEINGTDGSQYVMSVREHPMYSKSRA 142
           T KE   QRLVH+SADLARQ   +L N Q     +E+N  +G Q     R+       +A
Sbjct: 273 TAKERYAQRLVHMSADLARQVGMVLENVQNGIELEEMNRENGPQDTPCPRK-------KA 325

Query: 141 SLEER*QIVDLAKVGVHNRWPRHMQ 67
           S EER +IV LAK GV NR  R+MQ
Sbjct: 326 SHEERQEIVSLAKAGVRNRRARYMQ 350


>emb|CAN79610.1| hypothetical protein VITISV_022337 [Vitis vinifera]
          Length = 565

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
 Frame = -1

Query: 312 TVKENKLQRLVHLSADLARQAFGILGNFQ---ARQEINGTDGSQYVMSVREHPMYSKSRA 142
           T KE   QRLVH+SADLARQ   +L N Q     +E+N  +G Q     R+       +A
Sbjct: 292 TAKERYAQRLVHMSADLARQVGMVLENVQNGIELEEMNRENGPQDTPCPRK-------KA 344

Query: 141 SLEER*QIVDLAKVGVHNRWPRHMQ 67
           S EER +IV LAK GV NR  R+MQ
Sbjct: 345 SHEERQEIVSLAKAGVRNRRARYMQ 369


Top