BLASTX nr result

ID: Coptis25_contig00015532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015532
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dio...   403   e-110
emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]   402   e-110
ref|XP_002304683.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, p...   382   e-104
gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, p...   380   e-103

>ref|XP_002277768.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB [Vitis
            vinifera] gi|297738457|emb|CBI27658.3| unnamed protein
            product [Vitis vinifera]
          Length = 360

 Score =  403 bits (1035), Expect = e-110
 Identities = 217/367 (59%), Positives = 248/367 (67%), Gaps = 37/367 (10%)
 Frame = -1

Query: 1154 MYGSTGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDLSDVLDFKKA 975
            MYGS G +  DD+ERTAFR                             VDLS+V+DFK  
Sbjct: 1    MYGSYGVS--DDAERTAFRRAEKKYKVYYDDSKSSKKKKQLKQ-----VDLSEVVDFKAI 53

Query: 974  AQ-----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQP 810
             +     GE+P G + L  DF+ PVFCIENRPGFYFIP AL++EEQ  WI+ESLISFPQP
Sbjct: 54   LRSFNQSGEVPPGTFALQCDFDRPVFCIENRPGFYFIPDALTVEEQGRWIRESLISFPQP 113

Query: 809  PNRTNHYAIYGHIHDLFVAAQNKKVL------------------------RWQ------- 723
             NRTNH AIYG I DLF+AA+ +K+L                        RW+       
Sbjct: 114  YNRTNHNAIYGPIRDLFMAAKERKILVEEEDSSGGLDSLSNSSITNMDAERWKFYEENTV 173

Query: 722  -SSNMDQKEVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAM 546
             S     K ++A+ LLRKLRWSTLGLQFDWSKR+YNV+LPHNKIP++LC LAK MAAPAM
Sbjct: 174  SSRGSTCKSISASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDALCDLAKEMAAPAM 233

Query: 545  GTGEEFQPEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPI 366
              G+ FQPEAAIVNYF  GDMLGGHLDDMEADW KPIVS+SLGCKAIFLLGGKSR+D P+
Sbjct: 234  SKGKVFQPEAAIVNYFGLGDMLGGHLDDMEADWTKPIVSMSLGCKAIFLLGGKSRDDPPL 293

Query: 365  AMFLRSGDVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXX 186
            AMF+RSGDVVLMAG+ARECFHGVPRIFTD+ENAEI PL L  SHEDDV  L+Y       
Sbjct: 294  AMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIRSSRIN 353

Query: 185  XXXRQVF 165
               RQVF
Sbjct: 354  INIRQVF 360


>emb|CAN72697.1| hypothetical protein VITISV_011566 [Vitis vinifera]
          Length = 366

 Score =  402 bits (1034), Expect = e-110
 Identities = 217/368 (58%), Positives = 248/368 (67%), Gaps = 38/368 (10%)
 Frame = -1

Query: 1154 MYGSTGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-VDLSDVLDFKK 978
            MYGS G +  DD+ERTAFR                              VDLS+V+DFK 
Sbjct: 1    MYGSYGVS--DDAERTAFRRAEKKYKVYYDDSKSSKNVLENFRKKQLKQVDLSEVVDFKA 58

Query: 977  AAQ-----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQ 813
              +     GE+P G + L  DF+ PVFCIENRPGFYFIP AL++EEQ  WI+ESLISFPQ
Sbjct: 59   ILRSFNQSGEVPPGTFALQCDFDRPVFCIENRPGFYFIPDALTVEEQGRWIRESLISFPQ 118

Query: 812  PPNRTNHYAIYGHIHDLFVAAQNKKVL------------------------RWQ------ 723
            P NRTNH AIYG I DLF+AA+ +K+L                        RW+      
Sbjct: 119  PYNRTNHNAIYGPIRDLFMAAKERKILVEEEDSSGGLDSLSNSSITNMDAERWKFYEENT 178

Query: 722  --SSNMDQKEVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPA 549
              S     K ++A+ LLRKLRWSTLGLQFDWSKR+YNV+LPHNKIP++LC LAK MAAPA
Sbjct: 179  VSSRGSTCKSISASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDALCDLAKEMAAPA 238

Query: 548  MGTGEEFQPEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMP 369
            M  G+ FQPEAAIVNYF  GDMLGGHLDDMEADW KPIVS+SLGCKAIFLLGGKSR+D P
Sbjct: 239  MSKGKVFQPEAAIVNYFGLGDMLGGHLDDMEADWTKPIVSMSLGCKAIFLLGGKSRDDPP 298

Query: 368  IAMFLRSGDVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXX 189
            +AMF+RSGDVVLMAG+ARECFHGVPRIFTD+ENAEI PL L  SHEDDV  L+Y      
Sbjct: 299  LAMFVRSGDVVLMAGEARECFHGVPRIFTDQENAEIAPLELMFSHEDDVCFLEYIRSSRI 358

Query: 188  XXXXRQVF 165
                RQVF
Sbjct: 359  NINIRQVF 366


>ref|XP_002304683.1| predicted protein [Populus trichocarpa] gi|222842115|gb|EEE79662.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  398 bits (1022), Expect = e-108
 Identities = 216/356 (60%), Positives = 247/356 (69%), Gaps = 26/356 (7%)
 Frame = -1

Query: 1154 MYGSTGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--VDLSDVLDFK 981
            MYGS  A T DD++RT FR                               VDLS+VLDFK
Sbjct: 1    MYGSDKAVT-DDTDRTEFRKTEKKYKLYYDQNSKRYDLIFPFLKKKQPKQVDLSEVLDFK 59

Query: 980  KAAQ-----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFP 816
                     GE+P  I  +   F+ PVF +E+RPGFYFIPGALS++EQC WI+ESL+SFP
Sbjct: 60   SFLDSYHQNGELPPEIVVVDCRFDRPVFGLESRPGFYFIPGALSVDEQCRWIRESLMSFP 119

Query: 815  QPPNRTNHYAIYGHIHDLFVAAQNKKVL-----------RWQSSNMDQ--------KEVA 693
            QPPNRTNH AIYG I DLF+AA+ +KVL           RW     D         K V+
Sbjct: 120  QPPNRTNHNAIYGPISDLFIAAKERKVLVEDENMPANTRRWSFCEEDSVLLRGKSCKPVS 179

Query: 692  ATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAMGTGEEFQPEAA 513
            A+ LLRKLRWSTLGLQFDWSKR+YNV+LPHNKIP+ LCQLAK++AAPAM  GEEF PEAA
Sbjct: 180  ASVLLRKLRWSTLGLQFDWSKRNYNVSLPHNKIPDGLCQLAKKLAAPAMPVGEEFHPEAA 239

Query: 512  IVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSGDVVL 333
            IVNYF+SGD LGGHLDDMEADW+KPIVS+SLGCKAIFLLGGKSRED P+AMFLRSGDVVL
Sbjct: 240  IVNYFASGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDVVL 299

Query: 332  MAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXRQVF 165
            MAG+ARECFHGVPRIFTDKENAEIT L L+   E+D  +L+Y          RQVF
Sbjct: 300  MAGEARECFHGVPRIFTDKENAEITALELHFCDEND--ILEYIRTSRININIRQVF 353


>gb|AEL99108.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
            latifolia]
          Length = 354

 Score =  382 bits (982), Expect = e-104
 Identities = 207/360 (57%), Positives = 240/360 (66%), Gaps = 33/360 (9%)
 Frame = -1

Query: 1145 STGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDLSDVLDFKKAAQ- 969
            + GAT  DD ERTAFR                             VDLS+V+DFK   + 
Sbjct: 3    ANGAT--DDLERTAFRRAEKKYKLYYGQNSRKKKQQPRP------VDLSEVVDFKLILET 54

Query: 968  ----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQPPNR 801
                GE P G++ + +  EFPV C++NRPGFYFIPGALS+EEQC WI+ESL SFPQPPNR
Sbjct: 55   FDRTGETPDGVHVIRTGSEFPVICLDNRPGFYFIPGALSLEEQCQWIRESLTSFPQPPNR 114

Query: 800  TNHYAIYGHIHDLFVAAQNKKVL-------------------RW----QSSNMDQK---- 702
            TNH A+YG I+DLF AAQ  KVL                   RW    +S N+  K    
Sbjct: 115  TNHNALYGPINDLFAAAQEGKVLVEEELSPNVTQSLDNGQARRWTFSSESGNVSLKGSGG 174

Query: 701  -EVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAMGTGEEFQ 525
              + A+ LLRKL WSTLGLQFDWS+R+YNV LPHNKIP+ LCQLAK++A PAM  G+ F+
Sbjct: 175  NSILASVLLRKLHWSTLGLQFDWSQRNYNVDLPHNKIPDKLCQLAKKLAVPAMPLGDNFK 234

Query: 524  PEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSG 345
            PEAAIVNYF+SGD LGGHLDDME DW+KPIVS+SLGCK IFLLGGKSRED P+AMFLRSG
Sbjct: 235  PEAAIVNYFASGDTLGGHLDDMELDWSKPIVSMSLGCKGIFLLGGKSREDEPLAMFLRSG 294

Query: 344  DVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXRQVF 165
            DVVLMAG+ARECFHGVPRIFTD  N+EIT L  +LS + D   LDY          RQVF
Sbjct: 295  DVVLMAGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRININIRQVF 354


>gb|AEL99107.1| alpha-ketoglutarate-dependent dioxygenase alkB, partial [Silene
            latifolia]
          Length = 354

 Score =  380 bits (977), Expect = e-103
 Identities = 207/360 (57%), Positives = 240/360 (66%), Gaps = 33/360 (9%)
 Frame = -1

Query: 1145 STGATTPDDSERTAFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDLSDVLDFKKAAQ- 969
            + GAT  DD ERTAFR                             VDLS+V+DFK   + 
Sbjct: 3    ANGAT--DDLERTAFRRAEKKYKLYYGQNSRKKKQQPRP------VDLSEVVDFKLILET 54

Query: 968  ----GEIPAGIYQLHSDFEFPVFCIENRPGFYFIPGALSIEEQCHWIKESLISFPQPPNR 801
                GE P G++ + +  EFPV C++NRPGFYFIPGALS+EEQC WI+ESL SFPQPPNR
Sbjct: 55   FDRTGETPDGVHVIRTGSEFPVICLDNRPGFYFIPGALSLEEQCQWIRESLTSFPQPPNR 114

Query: 800  TNHYAIYGHIHDLFVAAQNKKVL-------------------RW----QSSNMDQK---- 702
            TNH A+YG I+DLF AAQ  KVL                   RW    +S N+  K    
Sbjct: 115  TNHNALYGPINDLFAAAQEGKVLVEEELSPNVTQSLDNGQARRWTFSSESGNVSLKGSGG 174

Query: 701  -EVAATTLLRKLRWSTLGLQFDWSKRDYNVTLPHNKIPESLCQLAKRMAAPAMGTGEEFQ 525
              + A+ LLRKLRWSTLGLQFDWS+R+YNV L HNKIP+ LCQLAK++A PAM  G+ F+
Sbjct: 175  NSILASVLLRKLRWSTLGLQFDWSQRNYNVDLLHNKIPDKLCQLAKKLAVPAMPLGDNFK 234

Query: 524  PEAAIVNYFSSGDMLGGHLDDMEADWNKPIVSISLGCKAIFLLGGKSREDMPIAMFLRSG 345
            PEAAIVNYF+SGD LGGHLDDME DW+KPIVS+SLGCK IFLLGGKSRED P+AMFLRSG
Sbjct: 235  PEAAIVNYFASGDTLGGHLDDMELDWSKPIVSMSLGCKGIFLLGGKSREDEPLAMFLRSG 294

Query: 344  DVVLMAGQARECFHGVPRIFTDKENAEITPLALNLSHEDDVYVLDYXXXXXXXXXXRQVF 165
            DVVLMAG+ARECFHGVPRIFTD  N+EIT L  +LS + D   LDY          RQVF
Sbjct: 295  DVVLMAGEARECFHGVPRIFTDAHNSEITALEKHLSTDSDHCFLDYIKTSRININIRQVF 354


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