BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015524
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]   130   1e-28
ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_003607207.1| Pentatricopeptide repeat-containing protein ...   123   2e-26

>ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
           gi|449521725|ref|XP_004167880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 521

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/98 (67%), Positives = 79/98 (80%)
 Frame = -3

Query: 299 YGCMVDLFSRWGKLDEAYQVIKTMPFDANSVLWRTLLGSCRTYGNVELAEEAFSMISELE 120
           YGCM+DL SRWG L+EAY +IKT PF + SVLWRTLLG CR + +VEL EE+F  ++ELE
Sbjct: 418 YGCMIDLLSRWGFLEEAYVMIKTCPFSSCSVLWRTLLGGCRLHRHVELGEESFRKLAELE 477

Query: 119 PPKDGDYVLLSNIYADMEKWEDVERMRNVMIELGVLKK 6
           P KDGDYVLLSNIYA+ E+W+DVER+R  MI  GV KK
Sbjct: 478 PGKDGDYVLLSNIYAEEERWDDVERLRKEMINYGVCKK 515


>ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
          Length = 636

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/99 (65%), Positives = 82/99 (82%)
 Frame = -3

Query: 299 YGCMVDLFSRWGKLDEAYQVIKTMPFDANSVLWRTLLGSCRTYGNVELAEEAFSMISELE 120
           YGCMVDL SR G L EA+ +IKTMPF+ANSVLWRTLLG+CR + +V+LAEE+F  + ++E
Sbjct: 530 YGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKME 589

Query: 119 PPKDGDYVLLSNIYADMEKWEDVERMRNVMIELGVLKKP 3
           P +DGDYVLLSNIYA+ ++W DVER+R+ MI  GV KKP
Sbjct: 590 PLRDGDYVLLSNIYAEAQRWNDVERVRSEMIGSGVPKKP 628


>emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
          Length = 633

 Score =  130 bits (327), Expect = 1e-28
 Identities = 59/96 (61%), Positives = 77/96 (80%)
 Frame = -3

Query: 299 YGCMVDLFSRWGKLDEAYQVIKTMPFDANSVLWRTLLGSCRTYGNVELAEEAFSMISELE 120
           YGCMVDL SR G L EA+ +IKTMPF+ANSVLWRTLLG+CR + +V+LAEE+F  + ++E
Sbjct: 424 YGCMVDLLSRCGLLKEAHHMIKTMPFEANSVLWRTLLGACRVHHHVDLAEESFQQLGKME 483

Query: 119 PPKDGDYVLLSNIYADMEKWEDVERMRNVMIELGVL 12
           P +DGDYVLLSNIYA+ ++W DVER   ++  L V+
Sbjct: 484 PLRDGDYVLLSNIYAEAQRWNDVERASKILANLIVM 519


>ref|XP_003522599.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Glycine max]
          Length = 535

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/98 (59%), Positives = 79/98 (80%)
 Frame = -3

Query: 299 YGCMVDLFSRWGKLDEAYQVIKTMPFDANSVLWRTLLGSCRTYGNVELAEEAFSMISELE 120
           YGC+VDL SR+G L+EA+Q+IKT P   +++LWRTLLG+CRT GNVELA+ +F  +++L 
Sbjct: 423 YGCIVDLLSRFGLLEEAHQMIKTAPLQNSAILWRTLLGACRTQGNVELAKVSFQQLAKLG 482

Query: 119 PPKDGDYVLLSNIYADMEKWEDVERMRNVMIELGVLKK 6
              DGDYVLLSNIYA+ E+W++VER+R+ MI L V K+
Sbjct: 483 RLTDGDYVLLSNIYAEAERWDEVERVRSEMIGLHVPKQ 520


>ref|XP_003607207.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508262|gb|AES89404.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/95 (61%), Positives = 73/95 (76%)
 Frame = -3

Query: 299 YGCMVDLFSRWGKLDEAYQVIKTMPFDANSVLWRTLLGSCRTYGNVELAEEAFSMISELE 120
           YGCMVDL SRWG L+EAYQ+I T PF  + VLWRTLLG+CRT  N ELAE +F  +++L+
Sbjct: 430 YGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLK 489

Query: 119 PPKDGDYVLLSNIYADMEKWEDVERMRNVMIELGV 15
              DGDYVLLSNIYA+  +W++VER+R+ M  L V
Sbjct: 490 QLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHV 524