BLASTX nr result

ID: Coptis25_contig00015511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015511
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261...    91   1e-16
emb|CBI15488.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_003551840.1| PREDICTED: probable receptor-like protein ki...    89   5e-16
ref|XP_003624375.1| Ser/Thr protein kinase [Medicago truncatula]...    88   6e-16

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/112 (37%), Positives = 66/112 (58%)
 Frame = +2

Query: 17  PFVSFLFIIIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKGRAQYCGHRDF 196
           P  +F FI I     P+ F  D+ ++  C+  ++ECG++K I YPFWG GR ++CG + F
Sbjct: 14  PITTFFFIFIAI---PMCFCVDNQQYEECTSSLYECGDMKGIGYPFWGDGRPKFCGQQGF 70

Query: 197 ELKCEEDDAIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNNCPARLANISL 352
           ELKC+ DD   I I    +RVLNIS + + +R++  +  +  CP    + +L
Sbjct: 71  ELKCQNDDYPLIDIGSLEFRVLNISNSTYAMRIARKDFWDQTCPKEFQSTTL 122


>ref|XP_002277015.2| PREDICTED: uncharacterized protein LOC100261246 [Vitis vinifera]
          Length = 1963

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/104 (40%), Positives = 65/104 (62%)
 Frame = +2

Query: 41   IIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKGRAQYCGHRDFELKCEEDD 220
            I FF  F  SF +D+ ++  C+  ++ECG++K I YPFWG GR Q+CG + FELKC++DD
Sbjct: 1320 ITFFSIFITSFCDDNQQYEECTSRLYECGDMKGIGYPFWGDGRPQFCG-QGFELKCQDDD 1378

Query: 221  AIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNNCPARLANISL 352
               I I    +RVLNIS + + +R++  +  +  CP    + +L
Sbjct: 1379 YPLIAIGSLEFRVLNISNSTYAMRIARKDFWDQTCPKEFQSTTL 1422



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/97 (38%), Positives = 56/97 (57%)
 Frame = +2

Query: 8   SPYPFVSFLFIIIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKGRAQYCGH 187
           SP   V  +F++     FP S   +D+ + NC + +FECG +++I YPFWG GR  +CG 
Sbjct: 272 SPKSIVVVIFLLSL--SFPESACAEDFSYSNC-KSLFECGRLRDIGYPFWGNGRPYHCGR 328

Query: 188 RDFELKCEEDDAIQIVIQGQNYRVLNISENNHTLRMS 298
             FEL+CE  +   I I+ Q Y VL+I      L+++
Sbjct: 329 PKFELRCERGEP-TIEIKSQKYHVLDIHHETQILKIA 364



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
 Frame = +2

Query: 5    FSPYPFVSFLFIIIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKG-RAQYC 181
            F P   V  LFI I  H FP      D+R+  C+  V ECG +  I YPFW  G +  YC
Sbjct: 1038 FFPSSLVISLFISILSHAFPKYVCGIDFRYATCNSSV-ECGRLGKIHYPFWVNGSQPWYC 1096

Query: 182  GHRDFELKCEEDDAIQIVIQGQNYRVLNISENNHTLRMSTM-NPVNNN--CPARLANI 346
            GH  F L C +D+A  ++I  + + V+++     TL+++ +  P   N  CP   A+I
Sbjct: 1097 GHPWFGLFCHKDEA-TMLIWPELFHVIDMDNRTQTLKIARIYEPSTGNFFCPIFNASI 1153



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
 Frame = +2

Query: 53   HDFPISFGEDDYRFLNCSRGVFECG----EVKNIKYPFWGKG-RAQYCGHRDFELKCEED 217
            HDF ++F      FL    G  EC     E+  I+YPFW  G +A+YCGH  F+L CE++
Sbjct: 802  HDFYVNF------FL---LGALECDWCGYELGKIEYPFWVSGHQAEYCGHPLFKLYCEDE 852

Query: 218  DAIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNN---CPARLANISLPNN 361
             AI I I+ + Y+VL I+  +  +++ TM+ +      CP      S P N
Sbjct: 853  HAI-IEIKSREYKVLKINPESQIIQIVTMDVLPKEHIVCPQSPLMDSTPFN 902


>emb|CBI15488.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/104 (40%), Positives = 65/104 (62%)
 Frame = +2

Query: 41  IIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKGRAQYCGHRDFELKCEEDD 220
           I FF  F  SF +D+ ++  C+  ++ECG++K I YPFWG GR Q+CG + FELKC++DD
Sbjct: 24  ITFFSIFITSFCDDNQQYEECTSRLYECGDMKGIGYPFWGDGRPQFCG-QGFELKCQDDD 82

Query: 221 AIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNNCPARLANISL 352
              I I    +RVLNIS + + +R++  +  +  CP    + +L
Sbjct: 83  YPLIAIGSLEFRVLNISNSTYAMRIARKDFWDQTCPKEFQSTTL 126


>ref|XP_003551840.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Glycine max]
          Length = 1476

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/111 (36%), Positives = 62/111 (55%)
 Frame = +2

Query: 20  FVSFLFIIIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKGRAQYCGHRDFE 199
           F SFL + I  +    S   DD  +L C    F C  +KN+ YPFWG  R  YCGH  F+
Sbjct: 550 FFSFLVMTIILNQILTSCAADDVHYLKCG-SPFHCANLKNLSYPFWGFSRPLYCGHPAFK 608

Query: 200 LKCEEDDAIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNNCPARLANISL 352
           L+C  + A  + I  +NYRVL +++++H +++   +  NN CP  L N ++
Sbjct: 609 LQCTGEVA-TVTIMSENYRVLEVNDSDHRIKLVRTDYWNNTCPTSLRNFTI 658



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +2

Query: 2   YFSPYPFVS-FLFIIIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKGRAQY 178
           +  P P +  F+ ++I     P     +D R   C+  +  CG +KNI +PFWG+ R + 
Sbjct: 7   HLPPIPILQHFILLLILIQTPPYLSSYNDDR--GCTNQLISCGNIKNIGFPFWGEKRPRD 64

Query: 179 CGHRDFELKCEEDDAIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNNCPARLANISL 352
           CGH   +L CE+ +   I I    Y+VL ++ +NHTLR++  + +   C  +    SL
Sbjct: 65  CGHPRMQLSCEQ-EITYININDFRYKVLEVNPDNHTLRITREDYLEGICQPKFVTTSL 121



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/76 (32%), Positives = 39/76 (51%)
 Frame = +2

Query: 98   NCSRGVFECGEVKNIKYPFWGKGRAQYCGHRDFELKCEEDDAIQIVIQGQNYRVLNISEN 277
            +C    F CG + N+ YPF G  R  +CG   F L C      ++ I   +YRV++I   
Sbjct: 828  SCHVTSFNCGSITNLSYPFTGGDRPSFCGPPQFLLNCRNGVVAELNISSVSYRVIDIDSE 887

Query: 278  NHTLRMSTMNPVNNNC 325
            +HTL ++ ++  N  C
Sbjct: 888  DHTLTLARLDLWNETC 903


>ref|XP_003624375.1| Ser/Thr protein kinase [Medicago truncatula]
           gi|355499390|gb|AES80593.1| Ser/Thr protein kinase
           [Medicago truncatula]
          Length = 1182

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/83 (44%), Positives = 55/83 (66%)
 Frame = +2

Query: 104 SRGVFECGEVKNIKYPFWGKGRAQYCGHRDFELKCEEDDAIQIVIQGQNYRVLNISENNH 283
           S  +F+C  +KN++YPFWG  R QYCGH  FEL+C +D+   I I  QNY++L +S+++H
Sbjct: 262 SISLFDCANLKNLRYPFWGSSRPQYCGHPSFELQC-KDELASITIMSQNYKILEVSDSDH 320

Query: 284 TLRMSTMNPVNNNCPARLANISL 352
            L++   +  NN CP  L N +L
Sbjct: 321 RLKVVRTDYWNNVCPTSLKNTTL 343



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/109 (27%), Positives = 51/109 (46%)
 Frame = +2

Query: 17  PFVSFLFIIIFFHDFPISFGEDDYRFLNCSRGVFECGEVKNIKYPFWGKGRAQYCGHRDF 196
           P ++F+   IF+     S         +C+   F CG +  + YPF G  R  YCG   F
Sbjct: 504 PIITFIIFFIFYLRHTTSL-PSHASLSSCNNTTFNCGHITKLSYPFTGGDRPSYCGPPQF 562

Query: 197 ELKCEEDDAIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNNCPARLAN 343
            L C +++  ++ I   +YRVL ++   H+L ++ ++  N  C     N
Sbjct: 563 HLNC-KNNVPELNISSVSYRVLQVNSVTHSLTLARLDLWNETCTHHYVN 610



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
 Frame = +2

Query: 8   SPYPFVSFLFIIIFFHDFPISFGEDDYRFLNCSRGVFECGE--VKNIKYPFWGKGRAQYC 181
           S + F S + ++IF  + P     D   + +C+   FECG   + N+KYPFWG  R + C
Sbjct: 8   SSFLFFSVMLLMIFIINIPTCMCND---YTDCNEA-FECGSSSITNLKYPFWGNNREERC 63

Query: 182 G---HRDFELKCEEDDAIQIVIQGQNYRVLNISENNHTLRMSTMNPVNNNCPARLANISL 352
           G     + EL CEE    +I I    YR+L        L ++  +     C   ++    
Sbjct: 64  GSVSDPNMELTCEE-SVPKITINDVKYRILEWDNTTQKLTVARDDYWGGICTVSVSVSDK 122

Query: 353 PNN 361
           PNN
Sbjct: 123 PNN 125


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