BLASTX nr result

ID: Coptis25_contig00015508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015508
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]               81   2e-18
ref|XP_003524368.1| PREDICTED: probable receptor-like protein ki...    69   1e-17
ref|XP_002332860.1| predicted protein [Populus trichocarpa] gi|2...    85   6e-17
ref|XP_003532513.1| PREDICTED: probable receptor-like protein ki...    67   7e-17
ref|XP_004138806.1| PREDICTED: probable serine/threonine-protein...    74   2e-16

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 81.3 bits (199), Expect(2) = 2e-18
 Identities = 35/84 (41%), Positives = 52/84 (61%)
 Frame = -2

Query: 613 VDDPKFVNCSRGVFECGDVKNIRYPFWGNGRDQYCGHPDFELKCEEDDAIEIVIRRQSYR 434
           VD+ ++  C+  ++ECGD+K I YPFWG+GR ++CG   FELKC+ DD   I I    +R
Sbjct: 31  VDNQQYEECTSSLYECGDMKGIGYPFWGDGRPKFCGQQGFELKCQNDDYPLIDIGSLEFR 90

Query: 433 VLNIFENNRTLRMRTMNPLNNNCP 362
           VLNI  +   +R+   +  +  CP
Sbjct: 91  VLNISNSTYAMRIARKDFWDQTCP 114



 Score = 37.0 bits (84), Expect(2) = 2e-18
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 22/113 (19%)
 Frame = -1

Query: 296 LFNYSTPFNQNITLFYDCGSSI-PQL-----IGNTIPCLTNDIN-TSYYWFDYLNIGLPQ 138
           LF+Y+   ++N+TLFY C   +  QL     I N   C   DIN T+ ++ D   +GL Q
Sbjct: 126 LFDYAGT-DRNLTLFYGCPDDVLSQLPATWNISNNFTCSVEDINDTTAFYADEAFLGLDQ 184

Query: 137 D---VWSCGTVVKVPILQAIL------------TTYTELLRSMEDGFDVVYVV 24
               + +C   V +P+L A +            +    L ++M  GFDV Y V
Sbjct: 185 HLAILRTCKINVTLPVLGAAIDELNANRTGGEFSNGERLEKAMNMGFDVDYSV 237



 Score = 48.1 bits (113), Expect(2) = 2e-08
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
 Frame = -2

Query: 607 DPKFVNCSRGVFECGDVKNIRYPFW-GNGRDQYCGHPDFELKCEEDDAIEIVIRRQSYRV 431
           DPKF  C      CG   N+ YPFW    ++ YCG P+F + C ++  + + I    Y +
Sbjct: 345 DPKFEACKP--HNCGTGPNVSYPFWIPKEQESYCGFPNFSITCNDEKPV-LTISDDYYVI 401

Query: 430 LNIFENNRTLRMRTMNPLN-NNCPARL 353
             IF  N +  M      + ++CP  L
Sbjct: 402 REIFYTNHSFLMSNSAVYDGDSCPTPL 428



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 13/109 (11%)
 Frame = -1

Query: 293 FNYSTPFNQNITLFYDCGSSIPQLIGNTIPCLTNDINTSYYWF-----DYLNIGLPQDVW 129
           FNYS P + ++ LFY+C S   + +   I C++N    S+  F     +Y+N        
Sbjct: 438 FNYS-PSHYDLLLFYNCTSVPVETLTIPIDCMSNATLHSFASFHEEALEYMNFSTE---- 492

Query: 128 SCGTVVKVPI--------LQAILTTYTELLRSMEDGFDVVYVVPNNSEC 6
           SC ++V VP+           +   +TE+LR   +GF + +   N S C
Sbjct: 493 SCQSMVNVPVDIDGEEGFGNLLNWNFTEILR---EGFVLSWTANNCSSC 538


>ref|XP_003524368.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Glycine max]
          Length = 669

 Score = 68.6 bits (166), Expect(2) = 1e-17
 Identities = 30/75 (40%), Positives = 42/75 (56%)
 Frame = -2

Query: 589 CSRGVFECGDVKNIRYPFWGNGRDQYCGHPDFELKCEEDDAIEIVIRRQSYRVLNIFENN 410
           CS+  F CG ++NI YPFWG  R Q+CG   F+L C  D    + +  Q + VLNI +  
Sbjct: 54  CSQLSFSCGTLRNISYPFWGGNRPQFCGRNGFKLTCMHDQNTSVQVGSQRFNVLNINQTA 113

Query: 409 RTLRMRTMNPLNNNC 365
            TLRM   + + + C
Sbjct: 114 STLRMARTDLVYDRC 128



 Score = 47.4 bits (111), Expect(2) = 1e-17
 Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = -1

Query: 269 QNITLFYDCGSSIPQLIGNTIPCLTNDINTSYYWFDYLNIGLPQ--DVWSCGTVVKVPIL 96
           QN+T+FY+C S I  ++GN   C  ND N  + ++      L Q   +  CG  V++ + 
Sbjct: 149 QNVTIFYECPSGINSVVGNNFTC-QNDSNNKHAFYVVNGTQLKQFPGLQKCGVSVQMQVS 207

Query: 95  QAILTT----YTELLRSMEDGFDVVYVVPNNSEC 6
           + ++         L +++E GFDV Y    +S+C
Sbjct: 208 EGVVWDSEGGIGALEKALEKGFDVRYDAELSSQC 241


>ref|XP_002332860.1| predicted protein [Populus trichocarpa] gi|222833662|gb|EEE72139.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 84.7 bits (208), Expect(2) = 6e-17
 Identities = 38/83 (45%), Positives = 52/83 (62%)
 Frame = -2

Query: 610 DDPKFVNCSRGVFECGDVKNIRYPFWGNGRDQYCGHPDFELKCEEDDAIEIVIRRQSYRV 431
           DD ++VNCS   F+CGDVK + YPFWG+ R  YCG+P+ +L C + D  EI I + +Y+V
Sbjct: 239 DDERYVNCSNS-FDCGDVKGVGYPFWGSNRPDYCGYPELKLDCSDQDP-EITIEKLTYKV 296

Query: 430 LNIFENNRTLRMRTMNPLNNNCP 362
           L I    RTL +   +   N CP
Sbjct: 297 LGIDNQTRTLSVARKDYAENICP 319



 Score = 28.9 bits (63), Expect(2) = 6e-17
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -1

Query: 299 NLFNYSTPFNQNITLFYDCGS--SIPQLIGNTIPCLTNDINTSYYWFDYLNIGL 144
           NL NY++  +QNIT++Y C +  +   L     PC  N    + Y+  + N+ +
Sbjct: 330 NLLNYTSD-DQNITIYYGCPTQGAPSSLFVPQFPCYINATGMTGYFTAFANLSV 382


>ref|XP_003532513.1| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Glycine max]
          Length = 664

 Score = 66.6 bits (161), Expect(2) = 7e-17
 Identities = 29/75 (38%), Positives = 43/75 (57%)
 Frame = -2

Query: 589 CSRGVFECGDVKNIRYPFWGNGRDQYCGHPDFELKCEEDDAIEIVIRRQSYRVLNIFENN 410
           CS+  F CG ++NI YPFWG  R Q+CG   F+L C  ++   + +  Q + VLNI +  
Sbjct: 53  CSQISFSCGTLRNISYPFWGGNRPQFCGRNGFKLTCMHNENTSVQVGSQRFNVLNINQTA 112

Query: 409 RTLRMRTMNPLNNNC 365
            TLRM   + + + C
Sbjct: 113 STLRMVRTDLVYDRC 127



 Score = 46.6 bits (109), Expect(2) = 7e-17
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
 Frame = -1

Query: 278 PFNQNITLFYDCGSSIPQLIGNTIPCLTNDINTSYYWFDYLNIGLPQDVWS-CGTVVKVP 102
           P  QN+ +FY+C S I  ++GNT  C  +     +Y  +   +    D+   CG  ++V 
Sbjct: 145 PSVQNVIVFYECPSGINSVVGNTFTCQNDTSKHVFYVVNGTQLNQFPDLHKYCGVSLQVQ 204

Query: 101 ILQAILTTYTELLRSMEDGFDVVYVVPNNSEC 6
           + Q ++  +   L  +E GFDV Y    +S+C
Sbjct: 205 VSQGVV--WESGLGVLEKGFDVRYDAELSSQC 234


>ref|XP_004138806.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Cucumis sativus] gi|449490207|ref|XP_004158537.1|
           PREDICTED: probable serine/threonine-protein kinase
           At1g18390-like [Cucumis sativus]
          Length = 705

 Score = 74.3 bits (181), Expect(2) = 2e-16
 Identities = 37/86 (43%), Positives = 50/86 (58%)
 Frame = -2

Query: 610 DDPKFVNCSRGVFECGDVKNIRYPFWGNGRDQYCGHPDFELKCEEDDAIEIVIRRQSYRV 431
           D+ K++NC   +  C    N+ YPFWG  R  YCGHP F+L C ED+A++I I   +YRV
Sbjct: 34  DEDKYLNCYSSL-NCFRYSNLGYPFWGPNRPDYCGHPSFKLTC-EDEAVKIEIESTTYRV 91

Query: 430 LNIFENNRTLRMRTMNPLNNNCPARL 353
           L I  N + L +  +   NN CP  L
Sbjct: 92  LEIDTNTQALTVARIE--NNTCPRYL 115



 Score = 37.7 bits (86), Expect(2) = 2e-16
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
 Frame = -1

Query: 302 NNLFNYSTPFNQNITLFYDCGSSIPQLIGNTIPCLTNDINTSYYWFDYLNIGLPQDVWS- 126
           +N+F YS+   Q + L YDC S  P+L G      + +IN++Y    Y+N+ + QD  S 
Sbjct: 122 SNIFYYSSN-TQPLKLLYDCSSLPPKLPGR----FSCNINSTY----YVNLIVTQDTDSD 172

Query: 125 ------CGTVVKVPILQAILTTY------TELLRSMEDGFDVVYVVPNN 15
                 C   V V I Q+ + T         L++++E GF++ + + N+
Sbjct: 173 TLNNVRCNHGVDVAISQSEMQTLKSKPSADNLIKALETGFELQWRIDNS 221


Top