BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015489
         (3019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containi...  1028   0.0  
ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containi...   917   0.0  
ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|2...   917   0.0  
ref|XP_003617141.1| Pentatricopeptide repeat-containing protein ...   909   0.0  
ref|NP_193221.3| pentatricopeptide repeat-containing protein [Ar...   904   0.0  

>ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Vitis vinifera]
          Length = 684

 Score = 1028 bits (2657), Expect = 0.0
 Identities = 498/658 (75%), Positives = 571/658 (86%), Gaps = 1/658 (0%)
 Frame = +1

Query: 1    ASHAKIIKTLGSPLPCFLSNHLVNMYSKFDLLKSAELVLSLSPDRSVVTWTALISGSVQN 180
            A+HA+IIKTL +PLP F+ NHLVNMYSK D   SA+L+LSL+P+RSVVTWTALI+GSVQN
Sbjct: 27   AAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQN 86

Query: 181  GHFTSALGHFCNMCRESIQPNDFTFPCTFKASASLKSPFTGKQLHALAIKFGQISDVFIG 360
            G FTSAL HF NM R+SIQPNDFTFPC FKAS SL+SP  GKQ+HALA+K GQISDVF+G
Sbjct: 87   GRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVG 146

Query: 361  CSAFDMYCKTGLRDDSRKLFDEMPDKNIATWNSFISNSVVDARIYDAINAFIGFRRVGGE 540
            CSAFDMY K GL +++RK+FDEMP++NIATWN+++SNSV++ R  DA+ AFI FR  G E
Sbjct: 147  CSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWE 206

Query: 541  PNSITFCAFLNACSDTSDLQLGRQLHGFVIRSGCDGDVRVANGLVDFYGKNHQIDSAEVI 720
            PN ITFCAFLNAC+  S L+LGRQLHGFV++SG + DV VANGL+DFYGK HQ+  +E+I
Sbjct: 207  PNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEII 266

Query: 721  FNGISEPNYVSWSSMVASYVQNDEDEKACLVFLKSRKEGVDPTDFMISSVLSACAGLAAL 900
            F+GIS+PN VSW SM+ SYVQNDE+EKACLVFL++RKEG++PTDFM+SSVLSACAGL+ L
Sbjct: 267  FSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVL 326

Query: 901  ELGKSVHCLGVKGCVDENVYVGSSLVDMYGKCGNIEDAERAFNGMLQRNLITWNAMIGGY 1080
            E+GKSVH L VK CV  N++VGS+LVDMYGKCG+IEDAERAF+ M +RNL+TWNAMIGGY
Sbjct: 327  EVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGY 386

Query: 1081 AHQGHADMALALFKEMTQG-NEVSPNYVTFVCVLSACSRAGSVEEGMEIFKLMREKYGIE 1257
            AHQG ADMA+ LF EMT G + V+PNYVTFVCVLSACSRAGSV  GMEIF+ MR +YGIE
Sbjct: 387  AHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIE 446

Query: 1258 PGAEHYACVVDLLGKAGRVEQAYEFIKVMPIRPTVSVWGALLGACRVYGRPELGKIAADK 1437
            PGAEHYACVVDLLG+AG VEQAY+FIK MPIRPTVSVWGALLGA +++G+ ELGK+AAD 
Sbjct: 447  PGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADN 506

Query: 1438 LFELDPQDSGNHVLLSNMFAAAGRWNEATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQA 1617
            LFELDP DSGNHVLLSNMFAAAGRW EAT VR EMKDVGIKKG GCSWIT  N VHVFQA
Sbjct: 507  LFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQA 566

Query: 1618 KDTSHERNSEIQAMLAKLRRDMKAAGYIPHTNFALYDLXXXXXXXXVWYHSEKLALAFGL 1797
            KDTSHERNSEIQAMLAKLR +M+AAGYIP T+FAL+DL        VWYHSEK+ALAFGL
Sbjct: 567  KDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGL 626

Query: 1798 ISIPPGVPIRITKNLRVCIDCHSALKFISSIVNREIIVRDNNRFHRFKDNLCSCRDYW 1971
            ISIP GVPIRITKNLR+C DCHSA+KFIS IV REIIVRDNN FHRF+DN CSCRDYW
Sbjct: 627  ISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684


>ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14850-like
            [Glycine max]
          Length = 686

 Score =  917 bits (2371), Expect = 0.0
 Identities = 450/660 (68%), Positives = 538/660 (81%), Gaps = 3/660 (0%)
 Frame = +1

Query: 1    ASHAKIIKTLGSPLPCFLSNHLVNMYSKFDLLKSAELVLSLSPDRSVVTWTALISGSVQN 180
            A HA I++T  +PLP FL NHLVNMYSK DL  SA+LVLSL+  R+VVTWT+LISG V N
Sbjct: 28   AVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHN 87

Query: 181  GHFTSALGHFCNMCRESIQPNDFTFPCTFKASASLKSPFTGKQLHALAIKFGQISDVFIG 360
              FTSAL HF NM RE + PNDFTFPC FKASASL  P TGKQLHALA+K G I DVF+G
Sbjct: 88   RRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVG 147

Query: 361  CSAFDMYCKTGLRDDSRKLFDEMPDKNIATWNSFISNSVVDARIYDAINAFIGFRRVGGE 540
            CSAFDMY KTGLR ++R +FDEMP +N+ATWN+++SN+V D R  DAI AF  F  V GE
Sbjct: 148  CSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGE 207

Query: 541  PNSITFCAFLNACSDTSDLQLGRQLHGFVIRSGCDGDVRVANGLVDFYGKNHQIDSAEVI 720
            PN+ITFCAFLNAC+D   L+LGRQLHGF++RS    DV V NGL+DFYGK   I S+E++
Sbjct: 208  PNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELV 267

Query: 721  FN--GISEPNYVSWSSMVASYVQNDEDEKACLVFLKSRKEGVDPTDFMISSVLSACAGLA 894
            F+  G    N VSW S++A+ VQN E+E+AC+VFL++RKE V+PTDFMISSVLSACA L 
Sbjct: 268  FSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELG 326

Query: 895  ALELGKSVHCLGVKGCVDENVYVGSSLVDMYGKCGNIEDAERAFNGMLQRNLITWNAMIG 1074
             LELG+SVH L +K CV+EN++VGS+LVD+YGKCG+IE AE+ F  M +RNL+TWNAMIG
Sbjct: 327  GLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIG 386

Query: 1075 GYAHQGHADMALALFKEMTQGN-EVSPNYVTFVCVLSACSRAGSVEEGMEIFKLMREKYG 1251
            GYAH G  DMAL+LF+EMT G+  ++ +YVT V VLSACSRAG+VE G++IF+ MR +YG
Sbjct: 387  GYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYG 446

Query: 1252 IEPGAEHYACVVDLLGKAGRVEQAYEFIKVMPIRPTVSVWGALLGACRVYGRPELGKIAA 1431
            IEPGAEHYACVVDLLG++G V++AYEFIK MPI PT+SVWGALLGAC+++G+ +LGKIAA
Sbjct: 447  IEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAA 506

Query: 1432 DKLFELDPQDSGNHVLLSNMFAAAGRWNEATDVRTEMKDVGIKKGPGCSWITVKNDVHVF 1611
            +KLFELDP DSGNHV+ SNM A+AGRW EAT VR EM+D+GIKK  G SW+ VKN VHVF
Sbjct: 507  EKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVF 566

Query: 1612 QAKDTSHERNSEIQAMLAKLRRDMKAAGYIPHTNFALYDLXXXXXXXXVWYHSEKLALAF 1791
            QAKD+ HE+NSEIQAMLAKLR +MK AGY+P  N +L+DL        VWYHSEK+ALAF
Sbjct: 567  QAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAF 626

Query: 1792 GLISIPPGVPIRITKNLRVCIDCHSALKFISSIVNREIIVRDNNRFHRFKDNLCSCRDYW 1971
            GLI++P GVPIRITKNLR+CIDCHSA+KFIS IV REIIVRDNNRFHRFKD  CSC+DYW
Sbjct: 627  GLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686


>ref|XP_002314694.1| predicted protein [Populus trichocarpa] gi|222863734|gb|EEF00865.1|
            predicted protein [Populus trichocarpa]
          Length = 631

 Score =  917 bits (2369), Expect = 0.0
 Identities = 437/633 (69%), Positives = 527/633 (83%)
 Frame = +1

Query: 73   MYSKFDLLKSAELVLSLSPDRSVVTWTALISGSVQNGHFTSALGHFCNMCRESIQPNDFT 252
            MYSK DL   A+L+L L+P R VVTWTALISGSVQNG+F+SAL +F  M RE+I+PNDFT
Sbjct: 1    MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60

Query: 253  FPCTFKASASLKSPFTGKQLHALAIKFGQISDVFIGCSAFDMYCKTGLRDDSRKLFDEMP 432
            FPC FKAS +L  PF GKQ+HA+A+K GQI+D F+GCSAFDMY KTGL+ ++++LFDEMP
Sbjct: 61   FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120

Query: 433  DKNIATWNSFISNSVVDARIYDAINAFIGFRRVGGEPNSITFCAFLNACSDTSDLQLGRQ 612
             +N+A WN++ISN+V+D R   AI+ FI FRRVGGEP+ ITFCAFLNAC+D   L LGRQ
Sbjct: 121  PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 613  LHGFVIRSGCDGDVRVANGLVDFYGKNHQIDSAEVIFNGISEPNYVSWSSMVASYVQNDE 792
            LHG VIRSG +GDV VANG++D YGK  +++ AE++FNG+   N VSW +MVA+  QNDE
Sbjct: 181  LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 793  DEKACLVFLKSRKEGVDPTDFMISSVLSACAGLAALELGKSVHCLGVKGCVDENVYVGSS 972
             EKAC+VFL  RKEG++ TD+M+SSV+SA AG++ LE G+SVH L VK CV+ +++VGS+
Sbjct: 241  KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 973  LVDMYGKCGNIEDAERAFNGMLQRNLITWNAMIGGYAHQGHADMALALFKEMTQGNEVSP 1152
            LVDMYGKCG+IED E+ F+ M +RNL++WNAMI GYAHQG  DMA+ LF+EM   +E   
Sbjct: 301  LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQ--SEAVA 358

Query: 1153 NYVTFVCVLSACSRAGSVEEGMEIFKLMREKYGIEPGAEHYACVVDLLGKAGRVEQAYEF 1332
            NYVT +CVLSACSR G+V+ G EIF+ MR++Y IEPGAEHYAC+ D+LG+AG VE+AYEF
Sbjct: 359  NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEF 418

Query: 1333 IKVMPIRPTVSVWGALLGACRVYGRPELGKIAADKLFELDPQDSGNHVLLSNMFAAAGRW 1512
            ++ MPIRPT+SVWGALL ACRVYG PELGKIAAD LF+LDP+DSGNHVLLSNMFAAAGRW
Sbjct: 419  VQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRW 478

Query: 1513 NEATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAKDTSHERNSEIQAMLAKLRRDMKAA 1692
            +EAT VR EMKDVGIKKG GCSW+T KN VHVFQAKDTSHERNSEIQAML KLR +M+AA
Sbjct: 479  DEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAA 538

Query: 1693 GYIPHTNFALYDLXXXXXXXXVWYHSEKLALAFGLISIPPGVPIRITKNLRVCIDCHSAL 1872
            GY+P TN+ALYDL        V YHSEK+ALAFGLI++PPGVPIRITKNLR+C DCHSA 
Sbjct: 539  GYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAF 598

Query: 1873 KFISSIVNREIIVRDNNRFHRFKDNLCSCRDYW 1971
            KFIS IV REIIVRDNNRFHRF+D+ CSCRD+W
Sbjct: 599  KFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  139 bits (350), Expect = 5e-30
 Identities = 112/423 (26%), Positives = 195/423 (46%), Gaps = 3/423 (0%)
 Frame = +1

Query: 7    HAKIIKTLGSPLPCFLSNHLVNMYSKFDLLKSAELVLSLSPDRSVVTWTALISGSVQNGH 186
            HA  +K LG     F+     +MYSK  L   A+ +    P R+V  W A IS +V +G 
Sbjct: 81   HAIALK-LGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGR 139

Query: 187  FTSALGHFCNMCRESIQPNDFTFPCTFKASASLKSPFTGKQLHALAIKFGQISDVFIGCS 366
               A+  F    R   +P+  TF     A A  +    G+QLH L I+ G   DV +   
Sbjct: 140  PGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANG 199

Query: 367  AFDMYCKTGLRDDSRKLFDEMPDKNIATWNSFISNSVVDARIYDAINAFIGFRRVGGEPN 546
              D+Y K    + +  +F+ M  +N  +W + ++    +     A   F+  R+ G E  
Sbjct: 200  IIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELT 259

Query: 547  SITFCAFLNACSDTSDLQLGRQLHGFVIRSGCDGDVRVANGLVDFYGKNHQIDSAEVIFN 726
                 + ++A +  S L+ GR +H   +++  +GD+ V + LVD YGK   I+  E +F+
Sbjct: 260  DYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFH 319

Query: 727  GISEPNYVSWSSMVASYVQNDEDEKACLVFLKSRKEGVDPTDFMISSVLSACAGLAALEL 906
             + E N VSW++M++ Y    + + A  +F + + E V     +I  VLSAC+   A++L
Sbjct: 320  EMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVANYVTLI-CVLSACSRGGAVKL 378

Query: 907  GKSV-HCLGVKGCVDENVYVGSSLVDMYGKCGNIEDAERAFNGM-LQRNLITWNAMIGGY 1080
            G  +   +  +  ++      + + DM G+ G +E A      M ++  +  W A++   
Sbjct: 379  GNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNAC 438

Query: 1081 AHQGHADMA-LALFKEMTQGNEVSPNYVTFVCVLSACSRAGSVEEGMEIFKLMREKYGIE 1257
               G  ++  +A         + S N+V    + +A   AG  +E   + K M++  GI+
Sbjct: 439  RVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAA---AGRWDEATLVRKEMKD-VGIK 494

Query: 1258 PGA 1266
             GA
Sbjct: 495  KGA 497


>ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355518476|gb|AET00100.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  909 bits (2348), Expect = 0.0
 Identities = 446/657 (67%), Positives = 532/657 (80%), Gaps = 2/657 (0%)
 Frame = +1

Query: 7    HAKIIKTLGSPLPCFLSNHLVNMYSKFDLLKSAELVLSLSPDRSVVTWTALISGSVQNGH 186
            HA II+T  +PLP FLSNHLVNMYSK DLL SA+ VLSL+  R+VVTWT+LISG V N  
Sbjct: 29   HAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRR 88

Query: 187  FTSALGHFCNMCRESIQPNDFTFPCTFKASASLKSPFTGKQLHALAIKFGQISDVFIGCS 366
            F  AL HF NM R+++QPNDFTFPC FKASA ++ P TGKQ+H LA+K G I DVF+GCS
Sbjct: 89   FLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCS 148

Query: 367  AFDMYCKTGLRDDSRKLFDEMPDKNIATWNSFISNSVVDARIYDAINAFIGFRRVGGEPN 546
             FDMYCKTG R D+  +FDEMP +N+ATWN++ISN+V D R  DAI AF  F  V GEPN
Sbjct: 149  CFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPN 208

Query: 547  SITFCAFLNACSDTSDLQLGRQLHGFVIRSGCDGDVRVANGLVDFYGKNHQIDSAEVIFN 726
            SITFCAFLNAC D   L LGRQLH F++R G   DV VANGL+DFYGK   I SAE++FN
Sbjct: 209  SITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFN 268

Query: 727  GI-SEPNYVSWSSMVASYVQNDEDEKACLVFLKSRKEGVDPTDFMISSVLSACAGLAALE 903
             I +  N VSW SM+A+ VQN E+E+AC+VFL++RKE V+PTDFMISSVLSACA L  LE
Sbjct: 269  RIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLE 327

Query: 904  LGKSVHCLGVKGCVDENVYVGSSLVDMYGKCGNIEDAERAFNGMLQRNLITWNAMIGGYA 1083
            LG+SVH L VK CV++N++VGS+LVDMYGKCG+IE+AE+ F+ + +RNL+TWNAMIGGYA
Sbjct: 328  LGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYA 387

Query: 1084 HQGHADMALALFKEMTQGNE-VSPNYVTFVCVLSACSRAGSVEEGMEIFKLMREKYGIEP 1260
            HQG  DMAL LF+EMT G+  + P+YVT + +LS CSR G+VE G++IF+ MR  YGIEP
Sbjct: 388  HQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEP 447

Query: 1261 GAEHYACVVDLLGKAGRVEQAYEFIKVMPIRPTVSVWGALLGACRVYGRPELGKIAADKL 1440
            GAEH+ACVVDLLG++G V++AYEFI+ M I+PT+SVWGALLGACR++G+ ELGKIAA+KL
Sbjct: 448  GAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKL 507

Query: 1441 FELDPQDSGNHVLLSNMFAAAGRWNEATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAK 1620
            FELD  DSGNHV+LSNM A+AGRW EAT VR EMKD+GIKK  G SWI VKN +HVFQAK
Sbjct: 508  FELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAK 567

Query: 1621 DTSHERNSEIQAMLAKLRRDMKAAGYIPHTNFALYDLXXXXXXXXVWYHSEKLALAFGLI 1800
            D+SH+RNSEIQAML KLR  MK AGY+P TN +L+DL        VWYHSEK+ALAFGLI
Sbjct: 568  DSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIALAFGLI 627

Query: 1801 SIPPGVPIRITKNLRVCIDCHSALKFISSIVNREIIVRDNNRFHRFKDNLCSCRDYW 1971
            ++P GVPIRITKNLR+C DCHSA+KFIS IV REIIVRDN+RFHRFKD  CSC+DYW
Sbjct: 628  ALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKDYW 684


>ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE 1
            gi|110735893|dbj|BAE99922.1| hypothetical protein
            [Arabidopsis thaliana] gi|332658109|gb|AEE83509.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 684

 Score =  904 bits (2335), Expect = 0.0
 Identities = 440/656 (67%), Positives = 528/656 (80%), Gaps = 1/656 (0%)
 Frame = +1

Query: 7    HAKIIKTLGSPLPCFLSNHLVNMYSKFDLLKSAELVLSLSPDRSVVTWTALISGSVQNGH 186
            HA+I+KTL SP P FL+N+L+NMYSK D  +SA LVL L+P R+VV+WT+LISG  QNGH
Sbjct: 29   HARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGH 88

Query: 187  FTSALGHFCNMCRESIQPNDFTFPCTFKASASLKSPFTGKQLHALAIKFGQISDVFIGCS 366
            F++AL  F  M RE + PNDFTFPC FKA ASL+ P TGKQ+HALA+K G+I DVF+GCS
Sbjct: 89   FSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCS 148

Query: 367  AFDMYCKTGLRDDSRKLFDEMPDKNIATWNSFISNSVVDARIYDAINAFIGFRRVGGEPN 546
            AFDMYCKT LRDD+RKLFDE+P++N+ TWN+FISNSV D R  +AI AFI FRR+ G PN
Sbjct: 149  AFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPN 208

Query: 547  SITFCAFLNACSDTSDLQLGRQLHGFVIRSGCDGDVRVANGLVDFYGKNHQIDSAEVIFN 726
            SITFCAFLNACSD   L LG QLHG V+RSG D DV V NGL+DFYGK  QI S+E+IF 
Sbjct: 209  SITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFT 268

Query: 727  GISEPNYVSWSSMVASYVQNDEDEKACLVFLKSRKEGVDPTDFMISSVLSACAGLAALEL 906
             +   N VSW S+VA+YVQN EDEKA +++L+SRK+ V+ +DFMISSVLSACAG+A LEL
Sbjct: 269  EMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328

Query: 907  GKSVHCLGVKGCVDENVYVGSSLVDMYGKCGNIEDAERAFNGMLQRNLITWNAMIGGYAH 1086
            G+S+H   VK CV+  ++VGS+LVDMYGKCG IED+E+AF+ M ++NL+T N++IGGYAH
Sbjct: 329  GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388

Query: 1087 QGHADMALALFKEMT-QGNEVSPNYVTFVCVLSACSRAGSVEEGMEIFKLMREKYGIEPG 1263
            QG  DMALALF+EM  +G   +PNY+TFV +LSACSRAG+VE GM+IF  MR  YGIEPG
Sbjct: 389  QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPG 448

Query: 1264 AEHYACVVDLLGKAGRVEQAYEFIKVMPIRPTVSVWGALLGACRVYGRPELGKIAADKLF 1443
            AEHY+C+VD+LG+AG VE+AYEFIK MPI+PT+SVWGAL  ACR++G+P+LG +AA+ LF
Sbjct: 449  AEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLF 508

Query: 1444 ELDPQDSGNHVLLSNMFAAAGRWNEATDVRTEMKDVGIKKGPGCSWITVKNDVHVFQAKD 1623
            +LDP+DSGNHVLLSN FAAAGRW EA  VR E+K VGIKKG G SWITVKN VH FQAKD
Sbjct: 509  KLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKD 568

Query: 1624 TSHERNSEIQAMLAKLRRDMKAAGYIPHTNFALYDLXXXXXXXXVWYHSEKLALAFGLIS 1803
             SH  N EIQ  LAKLR +M+AAGY P    +LYDL        V +HSEKLALAFGL+S
Sbjct: 569  RSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLS 628

Query: 1804 IPPGVPIRITKNLRVCIDCHSALKFISSIVNREIIVRDNNRFHRFKDNLCSCRDYW 1971
            +P  VPIRITKNLR+C DCHS  KF+S  V REIIVRDNNRFHRFKD +CSC+DYW
Sbjct: 629  LPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684