BLASTX nr result

ID: Coptis25_contig00015479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015479
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF74980.1|AF082890_1 cystathionine beta-lyase [Solanum tuber...   116   3e-24
ref|XP_002274313.1| PREDICTED: cystathionine beta-lyase, chlorop...   115   4e-24
ref|XP_002512818.1| cystathionine beta-lyase, putative [Ricinus ...   115   7e-24
ref|XP_004166746.1| PREDICTED: cystathionine beta-lyase, chlorop...   110   2e-22
ref|XP_004144238.1| PREDICTED: cystathionine beta-lyase, chlorop...   110   2e-22

>gb|AAF74980.1|AF082890_1 cystathionine beta-lyase [Solanum tuberosum]
          Length = 471

 Score =  116 bits (290), Expect = 3e-24
 Identities = 59/109 (54%), Positives = 74/109 (67%), Gaps = 10/109 (9%)
 Frame = +3

Query: 294 RASIIYKKFELNCIKERDMDVTTSALLANCSLNDMXXXXXXXXXL----------SVSTI 443
           + ++I +KF+LNC ++++MD+T SAL+ + +   M                    SVST+
Sbjct: 38  KGTLIEQKFQLNCSRDKEMDLTASALIDSAAAECMDEMGTMELPPQVEAREAKEPSVSTM 97

Query: 444 LMNFDTSFDPYGALSTPLYQTATFKQPSATVNGPYDYTRSGNPTRDVLE 590
           LMNF   FDPYGALSTPLYQT+TFKQPSAT NG YDYTRSGNPTRD LE
Sbjct: 98  LMNFSNDFDPYGALSTPLYQTSTFKQPSATENGQYDYTRSGNPTRDALE 146


>ref|XP_002274313.1| PREDICTED: cystathionine beta-lyase, chloroplastic [Vitis vinifera]
           gi|297739922|emb|CBI30104.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score =  115 bits (289), Expect = 4e-24
 Identities = 67/134 (50%), Positives = 86/134 (64%), Gaps = 10/134 (7%)
 Frame = +3

Query: 219 SFLPSDLN----NNQGLIRGIDVGRIGFNRA----SIIYKKFELNCIKERDMDVTTSALL 374
           SFL S  N    N  G + G     + FN      ++  KKFELNC +E++MDV+TSA++
Sbjct: 13  SFLTSHSNATDLNVPGFVYGKVPASLRFNTVKGNRALFGKKFELNCFQEKEMDVSTSAVV 72

Query: 375 ANCS--LNDMXXXXXXXXXLSVSTILMNFDTSFDPYGALSTPLYQTATFKQPSATVNGPY 548
              +  L +M          S+ST+L+N++   DP+ A+S PLYQTATFKQPSAT NGPY
Sbjct: 73  DGIADRLTEMEVKEP-----SISTMLINYENKSDPFDAVSPPLYQTATFKQPSATENGPY 127

Query: 549 DYTRSGNPTRDVLE 590
           DYTRSGNPTRDVLE
Sbjct: 128 DYTRSGNPTRDVLE 141


>ref|XP_002512818.1| cystathionine beta-lyase, putative [Ricinus communis]
           gi|223547829|gb|EEF49321.1| cystathionine beta-lyase,
           putative [Ricinus communis]
          Length = 467

 Score =  115 bits (287), Expect = 7e-24
 Identities = 68/138 (49%), Positives = 92/138 (66%), Gaps = 5/138 (3%)
 Frame = +3

Query: 192 ASTIFNPCLSFLPSDLNNNQGLIRGIDVGR-IGFNRASIIYKK-FELNCIKERDMDVTTS 365
           A+T FN  L+ L   ++  +   +G+ VG+   F    + + K F++NC  +++MDV+TS
Sbjct: 13  AATSFNSLLTEL--QVSTCRKASKGLWVGKECNFRGKRLTFPKLFKMNCSLDKEMDVSTS 70

Query: 366 ALL---ANCSLNDMXXXXXXXXXLSVSTILMNFDTSFDPYGALSTPLYQTATFKQPSATV 536
           A++   A CS N++          ++STILMNF+  FDPY A+S PLYQTATFKQPSAT 
Sbjct: 71  AVVDGVAECS-NEIDIREP-----NISTILMNFENKFDPYDAMSMPLYQTATFKQPSATE 124

Query: 537 NGPYDYTRSGNPTRDVLE 590
           NGPYDYTRSGNPTRD LE
Sbjct: 125 NGPYDYTRSGNPTRDALE 142


>ref|XP_004166746.1| PREDICTED: cystathionine beta-lyase, chloroplastic-like [Cucumis
           sativus]
          Length = 409

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/87 (59%), Positives = 66/87 (75%)
 Frame = +3

Query: 330 CIKERDMDVTTSALLANCSLNDMXXXXXXXXXLSVSTILMNFDTSFDPYGALSTPLYQTA 509
           C  +++MDV+TS L+ +  L +           S+ST++MNF++ FDPYGA+STPLYQTA
Sbjct: 6   CSMDKEMDVSTSTLIDDAELEEEEP--------SISTMIMNFESKFDPYGAVSTPLYQTA 57

Query: 510 TFKQPSATVNGPYDYTRSGNPTRDVLE 590
           TFKQP+AT NGPYDYTRSGNPTRD LE
Sbjct: 58  TFKQPTATENGPYDYTRSGNPTRDALE 84


>ref|XP_004144238.1| PREDICTED: cystathionine beta-lyase, chloroplastic-like [Cucumis
           sativus]
          Length = 459

 Score =  110 bits (275), Expect = 2e-22
 Identities = 52/87 (59%), Positives = 66/87 (75%)
 Frame = +3

Query: 330 CIKERDMDVTTSALLANCSLNDMXXXXXXXXXLSVSTILMNFDTSFDPYGALSTPLYQTA 509
           C  +++MDV+TS L+ +  L +           S+ST++MNF++ FDPYGA+STPLYQTA
Sbjct: 56  CSMDKEMDVSTSTLIDDAELEEEEP--------SISTMIMNFESKFDPYGAVSTPLYQTA 107

Query: 510 TFKQPSATVNGPYDYTRSGNPTRDVLE 590
           TFKQP+AT NGPYDYTRSGNPTRD LE
Sbjct: 108 TFKQPTATENGPYDYTRSGNPTRDALE 134


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