BLASTX nr result

ID: Coptis25_contig00015473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015473
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-...   425   e-116
ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-...   423   e-116
emb|CBI18200.3| unnamed protein product [Vitis vinifera]              398   e-108
emb|CBI37606.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002331882.1| predicted protein [Populus trichocarpa] gi|2...   382   e-103

>ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]
          Length = 576

 Score =  425 bits (1093), Expect = e-116
 Identities = 249/550 (45%), Positives = 318/550 (57%), Gaps = 65/550 (11%)
 Frame = +2

Query: 5    GQPFSVTDDAGDGHGGRGEESLQNSVSTNYMGDG-GEEGCRNSVAVNDIXXXXXXXXXXX 181
            G   +V  + G G GG G     NS        G GEEG R S                 
Sbjct: 14   GAAAAVEHEGGGGGGGGGGGGGSNSGGYGEEDRGRGEEGDRGSAGN-------------- 59

Query: 182  XQSSVAIRWPRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEK 361
                   RWPRQETLALLKIRSDMD+ F++S+LKGPLWE +SRKLAELGY RSAKKCKEK
Sbjct: 60   -------RWPRQETLALLKIRSDMDVTFRDSSLKGPLWEEVSRKLAELGYHRSAKKCKEK 112

Query: 362  FENIYKYHKRTKE-RAARVDGKPYRFSNQLEAIDSRPSLPPLSF---------------- 490
            FEN++KYH+RTKE RA++ DGK YRF +QLEA++++PSL  L                  
Sbjct: 113  FENVFKYHRRTKEGRASKADGKTYRFFDQLEALETQPSLASLPHSKPPAPAVLAATMPLA 172

Query: 491  -------EIQIPN--PIPISTTVLNVTPTNPADSPQANAYQSCQNI----------YISE 613
                   EI +P+  P P ++T     PT P+ +P  + +    N+          ++S 
Sbjct: 173  NLPTTLPEITVPSTLPNPTNSTANPTIPTIPSPTPPTSRHPPHNNVPTAHPAMAANFLSN 232

Query: 614  FISTSLSPRSSLREKSGYTKRKWSTFFENLIEEVVRKQEIFQNQFLKTLERLEHEHMARE 793
              S+S S    L E+ G  KRKW  FF+ L+++V+ +QE  Q +FL+ +E+ EH+ M RE
Sbjct: 233  STSSSTSSDEEL-ERRGKRKRKWKAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVRE 291

Query: 794  EAWKTQEMERLNREHETLVEERLAATTRNAAVIAFLEKVSEQKDS--------------- 928
            EAWK QEM R+NREHE LV+ER  A  ++AAVIAFL+K+SEQ++                
Sbjct: 292  EAWKMQEMARMNREHELLVQERSIAAAKDAAVIAFLQKISEQQNPVQLQDSTPPLPQPQA 351

Query: 929  ----------PLSMERTVDNLHLDKG---RNFIKMSCSRWPKAEVQALIVLRSDLEHRYQ 1069
                       L + + ++   +D G    N +  S SRWPKAEVQALI LR+ L+ +YQ
Sbjct: 352  GPPQPPPPQPQLQLVKVLEPRKMDNGGGAENLVPTSSSRWPKAEVQALIRLRTSLDVKYQ 411

Query: 1070 GNIPKGSLWEEISAAMRRFGYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSKTCPYFH 1249
             N PKG LWEEISA MR+ GYNR+AKRCKEKWENINKYF+KVKESNK RPEDSKTCPYFH
Sbjct: 412  ENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFH 471

Query: 1250 QLEALYKDKMDKIDKALSPSYGLKAEDLVMHMTNQYRHQSESLRLEHMGLDLAAEDLRSE 1429
            QLEALYK+K      + +PSY L   +  M        Q   L  E    +   ED+ SE
Sbjct: 472  QLEALYKEKNKMEINSFNPSYPLLKPENPMVPIMVQPEQQWPLHPEMNRSESGMEDMESE 531

Query: 1430 NDHENGDAED 1459
            N+ E    +D
Sbjct: 532  NNMEQNQEDD 541


>ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-2 [Vitis vinifera]
          Length = 510

 Score =  423 bits (1088), Expect = e-116
 Identities = 237/466 (50%), Positives = 311/466 (66%), Gaps = 33/466 (7%)
 Frame = +2

Query: 203  RWPRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKY 382
            RWPR+ETLALLKIRSDMD+ F++S+LK PLWE +SRKL ELGY R+AKKCKEKFENI+KY
Sbjct: 51   RWPREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAKKCKEKFENIFKY 110

Query: 383  HKRTKE-RAARVDGKPYRFSNQLEAIDSRPSLPPLSFEIQIPNPIPISTTV---LNVTPT 550
            HKRTKE R+ R +GK YRF  QLEA+D+ P +PP       P+P+   T+     ++  T
Sbjct: 111  HKRTKEGRSNRQNGKNYRFFEQLEALDNHPLMPP-------PSPVKYETSTPMAASMPQT 163

Query: 551  NPAD----SPQANAYQ-SCQNIYISEFISTSLSPRSSLREKSGYTK--RKWSTFFENLIE 709
            NP D    S   NA   S Q   +    +++ +  SS +E  G  K  RKW  FFE L++
Sbjct: 164  NPIDVTNVSQGINAVPCSIQKPAVDCVAASTSTTSSSGKESEGSRKKKRKWGVFFEKLMK 223

Query: 710  EVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNREHETLVEERLAATTRNAAV 889
            EV+ KQE  Q +F++ +E+ E + +AREEAWK QE++R+ REHE LV+ER  A  ++AAV
Sbjct: 224  EVIEKQENLQRKFIEAIEKCEQDRIAREEAWKLQELDRIKREHEILVQERSIAAAKDAAV 283

Query: 890  IAFLEKVSEQK------DSPLSMERTVDNLHLDKGRNFIKMSCSRWPKAEVQALIVLRSD 1051
            +AFL+K++EQ       ++P S E+  +      G N I+MS SRWPKAEV+ALI LR++
Sbjct: 284  LAFLQKIAEQAGPVQLPENP-SSEKVFEKQDNSNGENSIQMSSSRWPKAEVEALIRLRTN 342

Query: 1052 LEHRYQGNIPKGSLWEEISAAMRRFGYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSK 1231
             + +YQ + PKG LWEEIS AMR+ GY RSAKRCKEKWENINKYF++V++SNK RPEDSK
Sbjct: 343  FDMQYQESGPKGPLWEEISLAMRKIGYERSAKRCKEKWENINKYFKRVRDSNKRRPEDSK 402

Query: 1232 TCPYFHQLEALYKDKMDKIDKALSPS-YGLKAEDLVMHMTNQ--YRHQSESLRLEHMGLD 1402
            TCPYFHQL+ALYK+K  K++   + S Y LK ED++M M  Q   R QSES+  E    +
Sbjct: 403  TCPYFHQLDALYKEKTKKVENPDNNSGYNLKPEDILMQMMGQSEQRPQSESVTEEGGSEN 462

Query: 1403 LAA---EDLRSENDHENGDAE----------DVYENVINNPSSRTI 1501
            + A   E+   E + E+GD E          D Y+ V NN SS  I
Sbjct: 463  VNANQEEEEEEEEEEEDGDEEGGDGDEDDEADGYQIVANNTSSMAI 508



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 42/99 (42%), Positives = 64/99 (64%)
 Frame = +2

Query: 968  DKGRNFIKMSCSRWPKAEVQALIVLRSDLEHRYQGNIPKGSLWEEISAAMRRFGYNRSAK 1147
            +  RNF   + +RWP+ E  AL+ +RSD++  ++ +  K  LWEE+S  +   GY+R+AK
Sbjct: 42   ESDRNF---AGNRWPREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAK 98

Query: 1148 RCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEAL 1264
            +CKEK+ENI KY ++ KE    R ++ K   +F QLEAL
Sbjct: 99   KCKEKFENIFKYHKRTKEGRSNR-QNGKNYRFFEQLEAL 136


>emb|CBI18200.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score =  398 bits (1023), Expect = e-108
 Identities = 218/439 (49%), Positives = 282/439 (64%), Gaps = 36/439 (8%)
 Frame = +2

Query: 251  MDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHKRTKE-RAARVDGKP 427
            MD+ F++S+LKGPLWE +SRKLAELGY RSAKKCKEKFEN++KYH+RTKE RA++ DGK 
Sbjct: 1    MDVTFRDSSLKGPLWEEVSRKLAELGYHRSAKKCKEKFENVFKYHRRTKEGRASKADGKT 60

Query: 428  YRFSNQLEAIDSRPSLPPLSF-----------------------EIQIPN--PIPISTTV 532
            YRF +QLEA++++PSL  L                         EI +P+  P P ++T 
Sbjct: 61   YRFFDQLEALETQPSLASLPHSKPPAPAVLAATMPLANLPTTLPEITVPSTLPNPTNSTA 120

Query: 533  LNVTPTNPADSPQANAYQSCQNI----------YISEFISTSLSPRSSLREKSGYTKRKW 682
                PT P+ +P  + +    N+          ++S   S+S S    L E+ G  KRKW
Sbjct: 121  NPTIPTIPSPTPPTSRHPPHNNVPTAHPAMAANFLSNSTSSSTSSDEEL-ERRGKRKRKW 179

Query: 683  STFFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNREHETLVEERL 862
              FF+ L+++V+ +QE  Q +FL+ +E+ EH+ M REEAWK QEM R+NREHE LV+ER 
Sbjct: 180  KAFFQRLMKDVIERQEELQKRFLEAIEKREHDRMVREEAWKMQEMARMNREHELLVQERS 239

Query: 863  AATTRNAAVIAFLEKVSEQKDSPLSMERTVDNLHLDKGRNFIKMSCSRWPKAEVQALIVL 1042
             A  ++AAVIAFL+K+SEQ++ P+   R +DN       N +  S SRWPKAEVQALI L
Sbjct: 240  IAAAKDAAVIAFLQKISEQQN-PVLEPRKMDNG--GGAENLVPTSSSRWPKAEVQALIRL 296

Query: 1043 RSDLEHRYQGNIPKGSLWEEISAAMRRFGYNRSAKRCKEKWENINKYFRKVKESNKMRPE 1222
            R+ L+ +YQ N PKG LWEEISA MR+ GYNR+AKRCKEKWENINKYF+KVKESNK RPE
Sbjct: 297  RTSLDVKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPE 356

Query: 1223 DSKTCPYFHQLEALYKDKMDKIDKALSPSYGLKAEDLVMHMTNQYRHQSESLRLEHMGLD 1402
            DSKTCPYFHQLEALYK+K      + +PSY L   +  M        Q   L  E    +
Sbjct: 357  DSKTCPYFHQLEALYKEKNKMEINSFNPSYPLLKPENPMVPIMVQPEQQWPLHPEMNRSE 416

Query: 1403 LAAEDLRSENDHENGDAED 1459
               ED+ SEN+ E    +D
Sbjct: 417  SGMEDMESENNMEQNQEDD 435



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
 Frame = +2

Query: 203 RWPRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKY 382
           RWP+ E  AL+++R+ +D+ ++E+  KGPLWE IS  + +LGY R+AK+CKEK+ENI KY
Sbjct: 284 RWPKAEVQALIRLRTSLDVKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKY 343

Query: 383 HKRTKE--RAARVDGKPYRFSNQLEAI 457
            K+ KE  +    D K   + +QLEA+
Sbjct: 344 FKKVKESNKKRPEDSKTCPYFHQLEAL 370


>emb|CBI37606.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  384 bits (986), Expect = e-104
 Identities = 211/409 (51%), Positives = 271/409 (66%), Gaps = 14/409 (3%)
 Frame = +2

Query: 203  RWPRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKY 382
            RWPR+ETLALLKIRSDMD+ F++S+LK PLWE +SRKL ELGY R+AKKCKEKFENI+KY
Sbjct: 67   RWPREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAKKCKEKFENIFKY 126

Query: 383  HKRTKE-RAARVDGKPYRFSNQLEAIDSRPSLPPLSFEIQIPNPIPISTTV---LNVTPT 550
            HKRTKE R+ R +GK YRF  QLEA+D+ P +PP       P+P+   T+     ++  T
Sbjct: 127  HKRTKEGRSNRQNGKNYRFFEQLEALDNHPLMPP-------PSPVKYETSTPMAASMPQT 179

Query: 551  NPAD----SPQANAYQ-SCQNIYISEFISTSLSPRSSLREKSGYTK--RKWSTFFENLIE 709
            NP D    S   NA   S Q   +    +++ +  SS +E  G  K  RKW  FFE L++
Sbjct: 180  NPIDVTNVSQGINAVPCSIQKPAVDCVAASTSTTSSSGKESEGSRKKKRKWGVFFEKLMK 239

Query: 710  EVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNREHETLVEERLAATTRNAAV 889
            EV+ KQE  Q +F++ +E+ E + +AREEAWK QE++R+ REHE LV+ER  A  ++AA 
Sbjct: 240  EVIEKQENLQRKFIEAIEKCEQDRIAREEAWKLQELDRIKREHEILVQERSIAAAKDAA- 298

Query: 890  IAFLEKVSEQKDSPLSMERTVDNLHLDKGRNFIKMSCSRWPKAEVQALIVLRSDLEHRYQ 1069
                                          N I+MS SRWPKAEV+ALI LR++ + +YQ
Sbjct: 299  ------------------------------NSIQMSSSRWPKAEVEALIRLRTNFDMQYQ 328

Query: 1070 GNIPKGSLWEEISAAMRRFGYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSKTCPYFH 1249
             + PKG LWEEIS AMR+ GY RSAKRCKEKWENINKYF++V++SNK RPEDSKTCPYFH
Sbjct: 329  ESGPKGPLWEEISLAMRKIGYERSAKRCKEKWENINKYFKRVRDSNKRRPEDSKTCPYFH 388

Query: 1250 QLEALYKDKMDKIDKALSPS-YGLKAEDLVMHMTNQ--YRHQSESLRLE 1387
            QL+ALYK+K  K++   + S Y LK ED++M M  Q   R QSES+  E
Sbjct: 389  QLDALYKEKTKKVENPDNNSGYNLKPEDILMQMMGQSEQRPQSESVTEE 437



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 42/99 (42%), Positives = 64/99 (64%)
 Frame = +2

Query: 968  DKGRNFIKMSCSRWPKAEVQALIVLRSDLEHRYQGNIPKGSLWEEISAAMRRFGYNRSAK 1147
            +  RNF   + +RWP+ E  AL+ +RSD++  ++ +  K  LWEE+S  +   GY+R+AK
Sbjct: 58   ESDRNF---AGNRWPREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAK 114

Query: 1148 RCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEAL 1264
            +CKEK+ENI KY ++ KE    R ++ K   +F QLEAL
Sbjct: 115  KCKEKFENIFKYHKRTKEGRSNR-QNGKNYRFFEQLEAL 152


>ref|XP_002331882.1| predicted protein [Populus trichocarpa] gi|222874631|gb|EEF11762.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  382 bits (982), Expect = e-103
 Identities = 223/493 (45%), Positives = 290/493 (58%), Gaps = 52/493 (10%)
 Frame = +2

Query: 185  QSSVAIRWPRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKF 364
            Q S A RWP+QETLALL+IRSDMD+AF++S +K PLWE +SRKL ELGY RSAKKCKEKF
Sbjct: 10   QCSTANRWPKQETLALLEIRSDMDVAFRDSVVKAPLWEEVSRKLNELGYNRSAKKCKEKF 69

Query: 365  ENIYKYHKRTK-ERAARVDGKPYRFSNQLEAIDSRPSLP------------------PLS 487
            ENIYKYH+RTK  ++ R +GK YRF  QL+A+D   +L                   P+S
Sbjct: 70   ENIYKYHRRTKGSQSGRPNGKTYRFFEQLQALDKTNALVSPTSSDKDHCLMPSASVIPVS 129

Query: 488  FEIQIPNPIPISTTVLNVTPTNPADSPQANAYQSCQNIYISEFISTSLSPRSSLREKSGY 667
            F   IPN +P S             SP+ N    C +   +   STS       R+K   
Sbjct: 130  F---IPNDVPCSV-----------QSPRMN----CTDATSTSTASTSSEESEGTRKK--- 168

Query: 668  TKRKWSTFFENLIEEVVRKQEIFQNQFLKTLERLEHEHMAREEAWKTQEMERLNREHETL 847
             KR+ + FFE L++EV+ KQE  QN+FL+ +E+ E E +AREE WK QE++R+ RE E L
Sbjct: 169  -KRRLTDFFERLMKEVIEKQENLQNKFLEAIEKCEQERIAREEVWKMQELDRIKREQELL 227

Query: 848  VEERLAATTRNAAVIAFLEKVSEQ---------------------------KDSPLSMER 946
            V ER  A  ++AAV+AFL+K SEQ                           K+  + +E 
Sbjct: 228  VHERAIAAAKDAAVLAFLQKFSEQGIPVQLPDNPTVPMKFPDNQTSPALLSKNQAVPVEN 287

Query: 947  TVDNLHLDKGRNFIKMSCSRWPKAEVQALIVLRSDLEHRYQGNIPKGSLWEEISAAMRRF 1126
             V         +F+ MS SRWPK E+++LI +R+ LE +YQ N PKG LWEEIS +M+  
Sbjct: 288  VVKTHENSSVESFVNMSSSRWPKEEIESLIKIRTYLEFQYQENGPKGPLWEEISTSMKNL 347

Query: 1127 GYNRSAKRCKEKWENINKYFRKVKESNKMRPEDSKTCPYFHQLEALYKDKMDKIDKALSP 1306
            GY+RSAKRCKEKWEN+NKYF++VK+SNK RP DSKTCPYF QL+ALY++K  ++D   +P
Sbjct: 348  GYDRSAKRCKEKWENMNKYFKRVKDSNKKRPGDSKTCPYFQQLDALYREKTRRVD---NP 404

Query: 1307 SYGLKAEDLVMHMTNQYRHQSESLRLEHMGLDLAAEDLRSEN------DHENGDAEDVYE 1468
            SY LK E+L+MHM      Q        +      ED  SEN      D+   +  D Y 
Sbjct: 405  SYELKPEELLMHMMGGQEDQ-------QLPDSATTEDRESENVDQIQVDYRGKEDGDGYG 457

Query: 1469 NVINNPSSRTIAE 1507
             V  +PSS  I E
Sbjct: 458  IVAIDPSSLEIME 470


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