BLASTX nr result

ID: Coptis25_contig00015463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015463
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268864.2| PREDICTED: gem-associated protein 2-like [Vi...    93   3e-17
emb|CBI39169.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_003536805.1| PREDICTED: gem-associated protein 2-like [Gl...    89   5e-16
ref|XP_002530552.1| hypothetical protein RCOM_1267370 [Ricinus c...    87   1e-15
ref|XP_002327849.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15

>ref|XP_002268864.2| PREDICTED: gem-associated protein 2-like [Vitis vinifera]
          Length = 314

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/77 (62%), Positives = 54/77 (70%)
 Frame = +1

Query: 4   IRSLEVLSCLSREDCAWLYALCAAVDTPLDADTGASXXXXXXXXXXXXSEKSDSDEEVVM 183
           I SLE  S LSR DC WL+ALCAA+DTPL ADT A+            +EKS+ D+EVVM
Sbjct: 238 INSLETKSTLSRSDCMWLFALCAAIDTPLHADTCAALRSLLRKCASLRAEKSELDDEVVM 297

Query: 184 LNILVTIAGRYFGQFEN 234
           LNILVTIAGRYF Q EN
Sbjct: 298 LNILVTIAGRYFKQSEN 314


>emb|CBI39169.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/77 (62%), Positives = 54/77 (70%)
 Frame = +1

Query: 4   IRSLEVLSCLSREDCAWLYALCAAVDTPLDADTGASXXXXXXXXXXXXSEKSDSDEEVVM 183
           I SLE  S LSR DC WL+ALCAA+DTPL ADT A+            +EKS+ D+EVVM
Sbjct: 581 INSLETKSTLSRSDCMWLFALCAAIDTPLHADTCAALRSLLRKCASLRAEKSELDDEVVM 640

Query: 184 LNILVTIAGRYFGQFEN 234
           LNILVTIAGRYF Q EN
Sbjct: 641 LNILVTIAGRYFKQSEN 657


>ref|XP_003536805.1| PREDICTED: gem-associated protein 2-like [Glycine max]
          Length = 457

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/78 (57%), Positives = 51/78 (65%)
 Frame = +1

Query: 1   RIRSLEVLSCLSREDCAWLYALCAAVDTPLDADTGASXXXXXXXXXXXXSEKSDSDEEVV 180
           RIR LE    ++R DC WL+ALCA VD PLDADT AS            + K+  DEEVV
Sbjct: 380 RIRLLEAAGTMTRNDCMWLFALCATVDAPLDADTCASLRSLLRKCASIRAGKAGLDEEVV 439

Query: 181 MLNILVTIAGRYFGQFEN 234
           MLNIL TI+GRYFGQ EN
Sbjct: 440 MLNILATISGRYFGQSEN 457


>ref|XP_002530552.1| hypothetical protein RCOM_1267370 [Ricinus communis]
           gi|223529914|gb|EEF31843.1| hypothetical protein
           RCOM_1267370 [Ricinus communis]
          Length = 757

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/77 (54%), Positives = 53/77 (68%)
 Frame = +1

Query: 1   RIRSLEVLSCLSREDCAWLYALCAAVDTPLDADTGASXXXXXXXXXXXXSEKSDSDEEVV 180
           RI   E ++ LS+ DC WL+ALCAAVDTPLDADT A+            + KS+ D+EV+
Sbjct: 665 RISLAETMNTLSKNDCVWLFALCAAVDTPLDADTCAALRSLLRKCASIRAVKSELDDEVI 724

Query: 181 MLNILVTIAGRYFGQFE 231
           MLNIL+ I+GRYFGQ E
Sbjct: 725 MLNILIAISGRYFGQSE 741


>ref|XP_002327849.1| predicted protein [Populus trichocarpa] gi|222837258|gb|EEE75637.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/75 (54%), Positives = 51/75 (68%)
 Frame = +1

Query: 1   RIRSLEVLSCLSREDCAWLYALCAAVDTPLDADTGASXXXXXXXXXXXXSEKSDSDEEVV 180
           RI+  E +  LS+ DC WL+ALCAAVD PLDADT A+            + KS+ D+EV+
Sbjct: 355 RIKLAETMDTLSKNDCVWLFALCAAVDAPLDADTCAALRGLLRKCASLRASKSEHDDEVI 414

Query: 181 MLNILVTIAGRYFGQ 225
           MLNIL TI+GRYFGQ
Sbjct: 415 MLNILATISGRYFGQ 429


Top