BLASTX nr result
ID: Coptis25_contig00015409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015409
(855 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch... 218 1e-54
ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like... 213 3e-53
ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like... 212 1e-52
ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2... 208 1e-51
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici... 205 9e-51
>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
[Cucumis sativus] gi|449454778|ref|XP_004145131.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 2 [Cucumis sativus]
gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
ribosomal protein L12, mitochondrial-like isoform 1
[Cucumis sativus] gi|449472282|ref|XP_004153546.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 2 [Cucumis sativus]
gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
ribosomal protein L12, mitochondrial-like isoform 1
[Cucumis sativus] gi|449503355|ref|XP_004161961.1|
PREDICTED: 54S ribosomal protein L12, mitochondrial-like
isoform 2 [Cucumis sativus]
Length = 214
Score = 218 bits (556), Expect = 1e-54
Identities = 122/216 (56%), Positives = 152/216 (70%), Gaps = 10/216 (4%)
Frame = +1
Query: 82 MNSISKLGFRFSNGIFKNPNFLTSLISNPQKS----RNFSLPAK----EEELEMIDQRRL 237
M +S++ N +F N +++ NP RN++ P++ EEE+E IDQRRL
Sbjct: 1 MRLVSRISHLLPN-VFANTIRSSTVALNPLNRNGLHRNYAQPSRIEEEEEEVE-IDQRRL 58
Query: 238 PADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKLATERAPIVGLMK 417
PADYDP+NF+PTEHRSPPTDRVFR SSILM KL P+ G MK
Sbjct: 59 PADYDPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLGMTEMPVAGYMK 118
Query: 418 PSAV--VGMSAKGAGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEVRSFTALGLKEAK 591
P AV GM KG+ + AK+EKK EKTV+ELKLES+EA++KIKIIKEVRS T LGLKEAK
Sbjct: 119 PGAVGLAGMVKKGSSATAKEEKKAEKTVYELKLESYEASAKIKIIKEVRSLTDLGLKEAK 178
Query: 592 DLVEKAPAVIKGGVSKEEGEQIIEKMKAIGAKVVME 699
DLV+KAP+V+K G+SKEEGEQI+EKMKA+GAKV++E
Sbjct: 179 DLVDKAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214
>ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
Length = 206
Score = 213 bits (543), Expect = 3e-53
Identities = 114/168 (67%), Positives = 131/168 (77%), Gaps = 2/168 (1%)
Frame = +1
Query: 202 EEELEMIDQRRLPADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKL 381
EEE+E IDQRRLPADYDP+NF+PT+HRSPPT RVFR SSIL KL
Sbjct: 40 EEEVE-IDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKL 98
Query: 382 ATERAPIVGLMKPSAVVGMSAKG--AGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEV 555
+ P+V +MKP AV +S G A S AK+EKK EKTVFELKLES+EAASKIKIIKEV
Sbjct: 99 GMKEPPVVAIMKPGAVAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEV 158
Query: 556 RSFTALGLKEAKDLVEKAPAVIKGGVSKEEGEQIIEKMKAIGAKVVME 699
RSFT LGLKEAKDLVEKAP+V+K GVSKEEGEQ++EK+KA+GAKVV+E
Sbjct: 159 RSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206
>ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
Length = 206
Score = 212 bits (539), Expect = 1e-52
Identities = 113/168 (67%), Positives = 130/168 (77%), Gaps = 2/168 (1%)
Frame = +1
Query: 202 EEELEMIDQRRLPADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKL 381
EEE+E IDQRRLPADYDP+NF+PT+HRSPPT RVFR SSIL KL
Sbjct: 40 EEEVE-IDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKL 98
Query: 382 ATERAPIVGLMKPSAVVGMSAKG--AGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEV 555
+ P+V +MKP A +S G A S AK+EKK EKTVFELKLES+EAASKIKIIKEV
Sbjct: 99 GMKEPPVVAIMKPGAAAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEV 158
Query: 556 RSFTALGLKEAKDLVEKAPAVIKGGVSKEEGEQIIEKMKAIGAKVVME 699
RSFT LGLKEAKDLVEKAP+V+K GVSKEEGEQ++EK+KA+GAKVV+E
Sbjct: 159 RSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206
>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
predicted protein [Populus trichocarpa]
Length = 216
Score = 208 bits (529), Expect = 1e-51
Identities = 121/216 (56%), Positives = 145/216 (67%), Gaps = 10/216 (4%)
Frame = +1
Query: 82 MNSISKLGFRFSNGIFKNPNF--LTSLISNPQKSRNFS-----LPAKEEELEMIDQRRLP 240
M+ IS+L NG P L L N SR F+ + A+EEE IDQRRLP
Sbjct: 1 MSLISRLRHCLPNGFSTKPTISPLMPLNFNAVLSRGFAEAARKVEAEEEEEVEIDQRRLP 60
Query: 241 ADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNKLATERAPIVGLMKP 420
DYDP+ F+PTEHRSPPT+RVF+ +I+M ++ P +G++K
Sbjct: 61 TDYDPATFDPTEHRSPPTERVFKLVEEIAGLTLMEISELGTIIMKRMKMTEPPTIGVLKG 120
Query: 421 SA--VVGMSAKG-AGSVAKQEKKVEKTVFELKLESFEAASKIKIIKEVRSFTALGLKEAK 591
A + GM+ K A + AK+EKK EKTVFELKLESFEAASKIK+IKEVRSFT LGLKEAK
Sbjct: 121 GAAGLAGMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDLGLKEAK 180
Query: 592 DLVEKAPAVIKGGVSKEEGEQIIEKMKAIGAKVVME 699
DLVEK P+V+K GVSKEEGEQIIEKMKAIGAKVV+E
Sbjct: 181 DLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216
>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
gi|223526735|gb|EEF28965.1| 50S ribosomal protein
L7/L12, putative [Ricinus communis]
Length = 301
Score = 205 bits (522), Expect = 9e-51
Identities = 110/169 (65%), Positives = 128/169 (75%), Gaps = 2/169 (1%)
Frame = +1
Query: 199 KEEELEMIDQRRLPADYDPSNFNPTEHRSPPTDRVFRXXXXXXXXXXXXXXXFSSILMNK 378
+EEE+E IDQRRLPADYDP+ F+PTEHRSPPT+RVF+ SSI+M K
Sbjct: 134 EEEEVE-IDQRRLPADYDPATFDPTEHRSPPTERVFKLVDEVAGLTLVEVAELSSIIMKK 192
Query: 379 LATERAPIVGLMKPSA--VVGMSAKGAGSVAKQEKKVEKTVFELKLESFEAASKIKIIKE 552
P VG++K A + GM+ K + AK+EKK EKTVFELKLES+EAASKIKIIKE
Sbjct: 193 RGMTELPTVGVLKGGAAGLAGMAMKAPAAAAKEEKKPEKTVFELKLESYEAASKIKIIKE 252
Query: 553 VRSFTALGLKEAKDLVEKAPAVIKGGVSKEEGEQIIEKMKAIGAKVVME 699
VRSFT LGLKEAKDLVEK P+++K GVSKEE EQIIEKMKA+GAKVVME
Sbjct: 253 VRSFTDLGLKEAKDLVEKTPSILKAGVSKEEAEQIIEKMKAVGAKVVME 301