BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015400
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_740691.1| ribosomal protein S19 [Nandina domestica] gi|12...    72   4e-11
ref|NP_623827.1| 30S ribosomal protein S19 [Thermoanaerobacter t...    72   6e-11
ref|ZP_08623359.1| 30S ribosomal protein S19 [Acetonema longum D...    72   6e-11
dbj|BAG06514.1| ribosomal protein S19 [Sarcandra glabra]               72   6e-11
dbj|BAG06482.1| ribosomal protein S19 [Chloranthus oldhamii]           72   6e-11

>ref|YP_740691.1| ribosomal protein S19 [Nandina domestica]
           gi|122165921|sp|Q09FS0.1|RR19_NANDO RecName: Full=30S
           ribosomal protein S19, chloroplastic
           gi|114054512|gb|ABI49905.1| ribosomal protein S19
           [Nandina domestica]
          Length = 92

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = -1

Query: 251 GHTIAIHNGRKHLRRKITEGMVGHKLGEFAPTLTFRGHA 135
           GHTIAIHNG++HL   ITE MVGHKLGEFAPTLTFRGHA
Sbjct: 46  GHTIAIHNGKEHLPIYITESMVGHKLGEFAPTLTFRGHA 84


>ref|NP_623827.1| 30S ribosomal protein S19 [Thermoanaerobacter tengcongensis MB4]
           gi|22096102|sp|Q8R7V8.1|RS19_THETN RecName: Full=30S
           ribosomal protein S19 gi|20517290|gb|AAM25431.1|
           Ribosomal protein S19 [Thermoanaerobacter tengcongensis
           MB4]
          Length = 93

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -1

Query: 251 GHTIAIHNGRKHLRRKITEGMVGHKLGEFAPTLTFRGHAG 132
           GHTIA+H+GRKH+   ITE MVGHKLGEFAPT TFRGHAG
Sbjct: 46  GHTIAVHDGRKHVPVYITEAMVGHKLGEFAPTRTFRGHAG 85


>ref|ZP_08623359.1| 30S ribosomal protein S19 [Acetonema longum DSM 6540]
           gi|337276946|gb|EGO65347.1| 30S ribosomal protein S19
           [Acetonema longum DSM 6540]
          Length = 94

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/41 (75%), Positives = 35/41 (85%)
 Frame = -1

Query: 251 GHTIAIHNGRKHLRRKITEGMVGHKLGEFAPTLTFRGHAGH 129
           GHTIAIH+GRKH+   +TE MVGHKLGEFAPT TF+GH GH
Sbjct: 46  GHTIAIHDGRKHVPVYVTEDMVGHKLGEFAPTRTFKGHGGH 86


>dbj|BAG06514.1| ribosomal protein S19 [Sarcandra glabra]
          Length = 92

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = -1

Query: 251 GHTIAIHNGRKHLRRKITEGMVGHKLGEFAPTLTFRGHA 135
           GHTIAIHNGR+HL   IT+ MVGHKLGEFAPTLTFRGHA
Sbjct: 46  GHTIAIHNGREHLPIYITDRMVGHKLGEFAPTLTFRGHA 84


>dbj|BAG06482.1| ribosomal protein S19 [Chloranthus oldhamii]
          Length = 92

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = -1

Query: 251 GHTIAIHNGRKHLRRKITEGMVGHKLGEFAPTLTFRGHA 135
           GHTIAIHNGR+HL   IT+ MVGHKLGEFAPTLTFRGHA
Sbjct: 46  GHTIAIHNGREHLPIYITDRMVGHKLGEFAPTLTFRGHA 84