BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015348
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264926.1| PREDICTED: thymidylate kinase [Vitis vinifer...   304   2e-80
gb|AFK47164.1| unknown [Medicago truncatula]                          302   9e-80
ref|XP_003596734.1| Thymidylate kinase [Medicago truncatula] gi|...   302   1e-79
ref|XP_003591737.1| Thymidylate kinase [Medicago truncatula] gi|...   302   1e-79
ref|XP_002509564.1| thymidylate kinase, putative [Ricinus commun...   301   3e-79

>ref|XP_002264926.1| PREDICTED: thymidylate kinase [Vitis vinifera]
            gi|296090257|emb|CBI40076.3| unnamed protein product
            [Vitis vinifera]
          Length = 260

 Score =  304 bits (779), Expect = 2e-80
 Identities = 157/267 (58%), Positives = 185/267 (69%)
 Frame = +2

Query: 209  FGTAKATKPSKFQLNFPKKTYSTQIGMEDGQIDNQRGALVVLEGLDRSGKTSQCNXXXXX 388
            FG   A    KF  N         + ME+ +  + RGAL+VLEGLDRSGK+SQ +     
Sbjct: 15   FGAGSARGLVKFGSNLRCNCSFRNMHMENNRNSDSRGALIVLEGLDRSGKSSQSSRMMSY 74

Query: 389  XXXXXXXVESWRFPDRKTGVGEMISSYLANKSQLDDRAIHLLFSANRWEKRSLMESKLKS 568
                    E WRFPDR T VG+MISSYLANKS LDD  IHLLFSANRWEKRSLME+KL++
Sbjct: 75   LEGLGVSAELWRFPDRSTCVGQMISSYLANKSDLDDHTIHLLFSANRWEKRSLMETKLRT 134

Query: 569  GTTLIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPDLVLYLDIPPEKAADRGGYGVEK 748
            GTTLIVDRYSYSGVAFSSAKGLDI+WCKAPE+GLLAPDLV+YL+IPPEKAA+RGGYG E+
Sbjct: 135  GTTLIVDRYSYSGVAFSSAKGLDIEWCKAPEMGLLAPDLVVYLNIPPEKAAERGGYGGER 194

Query: 749  YEQLEFQQKVSQHYQILRDDTWQIIDACLPXXXXXXXXXXXXXXXXXXXXXIIDACLPME 928
            YEQL+FQ+KV+ HYQ+LRD +W+I                            IDA LP+E
Sbjct: 195  YEQLDFQRKVAHHYQVLRDPSWKI----------------------------IDASLPIE 226

Query: 929  DVEKQVRELVLDCVTACRNGKPLSQLW 1009
            DVEK +R++VLDCV  C+ GK L  LW
Sbjct: 227  DVEKPLRDMVLDCVKTCKKGKTLLNLW 253


>gb|AFK47164.1| unknown [Medicago truncatula]
          Length = 263

 Score =  302 bits (774), Expect = 9e-80
 Identities = 155/264 (58%), Positives = 181/264 (68%), Gaps = 8/264 (3%)
 Frame = +2

Query: 242  FQLNFPKKTYSTQIGMEDGQID--------NQRGALVVLEGLDRSGKTSQCNXXXXXXXX 397
            FQ+    K    +I ME G +           RGAL+VLEGLDRSGK+SQC+        
Sbjct: 26   FQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGALIVLEGLDRSGKSSQCSRLVSYLEG 85

Query: 398  XXXXVESWRFPDRKTGVGEMISSYLANKSQLDDRAIHLLFSANRWEKRSLMESKLKSGTT 577
                 E WRFPDR T VG+MIS+YL N SQLDD  IHLLFSANRWEKRSLME+KLKSGTT
Sbjct: 86   EGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTIHLLFSANRWEKRSLMETKLKSGTT 145

Query: 578  LIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPDLVLYLDIPPEKAADRGGYGVEKYEQ 757
            LIVDRYSYSGVAFSSAKGLDIDWCK+PE GLLAPDLV YLDI P+KAA+RGGYG E+YE+
Sbjct: 146  LIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPDLVAYLDISPDKAAERGGYGDERYEK 205

Query: 758  LEFQQKVSQHYQILRDDTWQIIDACLPXXXXXXXXXXXXXXXXXXXXXIIDACLPMEDVE 937
            LEFQQKV++HY++L D +W+I+                            DAC P+EDVE
Sbjct: 206  LEFQQKVAEHYKVLHDTSWKIV----------------------------DACQPIEDVE 237

Query: 938  KQVRELVLDCVTACRNGKPLSQLW 1009
            KQ++E+ L CV  C+ GKPLS LW
Sbjct: 238  KQLQEIALACVKQCQQGKPLSSLW 261


>ref|XP_003596734.1| Thymidylate kinase [Medicago truncatula] gi|355485782|gb|AES66985.1|
            Thymidylate kinase [Medicago truncatula]
          Length = 263

 Score =  302 bits (773), Expect = 1e-79
 Identities = 155/264 (58%), Positives = 181/264 (68%), Gaps = 8/264 (3%)
 Frame = +2

Query: 242  FQLNFPKKTYSTQIGMEDGQID--------NQRGALVVLEGLDRSGKTSQCNXXXXXXXX 397
            FQ+    K    +I ME G +           RGAL+VLEGLDRSGK+SQC+        
Sbjct: 26   FQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGALIVLEGLDRSGKSSQCSRLVSYLEG 85

Query: 398  XXXXVESWRFPDRKTGVGEMISSYLANKSQLDDRAIHLLFSANRWEKRSLMESKLKSGTT 577
                 E WRFPDR T VG+MIS+YL N SQLDD  IHLLFSANRWEKRSLME+KLKSGTT
Sbjct: 86   EGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTIHLLFSANRWEKRSLMETKLKSGTT 145

Query: 578  LIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPDLVLYLDIPPEKAADRGGYGVEKYEQ 757
            LIVDRYSYSGVAFSSAKGLDIDWCK+PE GLLAPDLV YLDI P+KAA+RGGYG E+YE+
Sbjct: 146  LIVDRYSYSGVAFSSAKGLDIDWCKSPENGLLAPDLVAYLDISPDKAAERGGYGDERYEK 205

Query: 758  LEFQQKVSQHYQILRDDTWQIIDACLPXXXXXXXXXXXXXXXXXXXXXIIDACLPMEDVE 937
            LEFQQKV++HY++L D +W+I+                            DAC P+EDVE
Sbjct: 206  LEFQQKVAEHYKVLHDASWKIV----------------------------DACQPIEDVE 237

Query: 938  KQVRELVLDCVTACRNGKPLSQLW 1009
            KQ++E+ L CV  C+ GKPLS LW
Sbjct: 238  KQLQEIALACVKQCQQGKPLSSLW 261


>ref|XP_003591737.1| Thymidylate kinase [Medicago truncatula] gi|355480785|gb|AES61988.1|
            Thymidylate kinase [Medicago truncatula]
          Length = 263

 Score =  302 bits (773), Expect = 1e-79
 Identities = 155/264 (58%), Positives = 181/264 (68%), Gaps = 8/264 (3%)
 Frame = +2

Query: 242  FQLNFPKKTYSTQIGMEDGQID--------NQRGALVVLEGLDRSGKTSQCNXXXXXXXX 397
            FQ+    K    +I ME G +           RGAL+VLEGLDRSGK+SQC+        
Sbjct: 26   FQVKLSSKCSPRRIRMEAGNLSCSIEGNKKESRGALIVLEGLDRSGKSSQCSRLVSYLEG 85

Query: 398  XXXXVESWRFPDRKTGVGEMISSYLANKSQLDDRAIHLLFSANRWEKRSLMESKLKSGTT 577
                 E WRFPDR T VG+MIS+YL N SQLDD  IHLLFSANRWEKRSLME+KLKSGTT
Sbjct: 86   EGLSAELWRFPDRTTNVGQMISAYLTNASQLDDHTIHLLFSANRWEKRSLMETKLKSGTT 145

Query: 578  LIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPDLVLYLDIPPEKAADRGGYGVEKYEQ 757
            LIVDRYSYSGVAFSSAKGLDIDWCKAPE GLLAPDLV YLDI P+KAA+RGGYG E+YE+
Sbjct: 146  LIVDRYSYSGVAFSSAKGLDIDWCKAPENGLLAPDLVAYLDISPDKAAERGGYGDERYEK 205

Query: 758  LEFQQKVSQHYQILRDDTWQIIDACLPXXXXXXXXXXXXXXXXXXXXXIIDACLPMEDVE 937
            LEFQQKV++HY++L D +W+I+                            DAC P++DVE
Sbjct: 206  LEFQQKVAEHYKVLHDASWKIV----------------------------DACQPIQDVE 237

Query: 938  KQVRELVLDCVTACRNGKPLSQLW 1009
            KQ++E+ L CV  C+ GKPLS LW
Sbjct: 238  KQLQEIALACVKQCQQGKPLSSLW 261


>ref|XP_002509564.1| thymidylate kinase, putative [Ricinus communis]
            gi|223549463|gb|EEF50951.1| thymidylate kinase, putative
            [Ricinus communis]
          Length = 264

 Score =  301 bits (770), Expect = 3e-79
 Identities = 159/275 (57%), Positives = 186/275 (67%), Gaps = 8/275 (2%)
 Frame = +2

Query: 209  FGTAKATKPSKFQLNFPKKTYSTQIGMEDG------QIDN--QRGALVVLEGLDRSGKTS 364
            FG + A +     LN+P K+    I ME        +++N   RGA +VLEGLDRSGKTS
Sbjct: 15   FGASAARRSLNAHLNYPGKSSIRSIRMESDISTGNLRVENCESRGAFIVLEGLDRSGKTS 74

Query: 365  QCNXXXXXXXXXXXXVESWRFPDRKTGVGEMISSYLANKSQLDDRAIHLLFSANRWEKRS 544
            QC              E WRFPDR T +G+MIS+YL+N+SQLDDR IHLL+SANRWEK S
Sbjct: 75   QCGKLVSYLERLGHETELWRFPDRTTTIGQMISAYLSNQSQLDDRTIHLLYSANRWEKNS 134

Query: 545  LMESKLKSGTTLIVDRYSYSGVAFSSAKGLDIDWCKAPEIGLLAPDLVLYLDIPPEKAAD 724
            LME+KLKSGTTLIVDRYSYSGVAFS+AKGLD +WCKAPEIGLLAPDLVLYLDIPPEKAA+
Sbjct: 135  LMETKLKSGTTLIVDRYSYSGVAFSAAKGLDFEWCKAPEIGLLAPDLVLYLDIPPEKAAE 194

Query: 725  RGGYGVEKYEQLEFQQKVSQHYQILRDDTWQIIDACLPXXXXXXXXXXXXXXXXXXXXXI 904
            RGGYG E+YE+LEFQ KV   YQ LRD +W+                            I
Sbjct: 195  RGGYGGERYEKLEFQMKVGNCYQTLRDSSWE----------------------------I 226

Query: 905  IDACLPMEDVEKQVRELVLDCVTACRNGKPLSQLW 1009
            IDA  PME+V+KQ++E+VLD V A   GKPLS LW
Sbjct: 227  IDASQPMEEVQKQIQEIVLDHVLASEKGKPLSHLW 261