BLASTX nr result

ID: Coptis25_contig00015341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015341
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527422.1| PREDICTED: protein Mpv17-like [Glycine max]       243   5e-62
ref|XP_002332407.1| predicted protein [Populus trichocarpa] gi|2...   241   1e-61
ref|XP_003607501.1| Protein Mpv17 [Medicago truncatula] gi|35550...   239   7e-61
ref|XP_002456297.1| hypothetical protein SORBIDRAFT_03g033650 [S...   238   1e-60
ref|XP_002881872.1| peroxisomal membrane 22 kDa family protein [...   238   1e-60

>ref|XP_003527422.1| PREDICTED: protein Mpv17-like [Glycine max]
          Length = 217

 Score =  243 bits (619), Expect = 5e-62
 Identities = 120/204 (58%), Positives = 149/204 (73%), Gaps = 9/204 (4%)
 Frame = +2

Query: 5   WNFFPKGGRK---GESGAVVSK----FKFPFKQAATAASLTLTGDSIAQLTSRWKTIPPG 163
           WN  P+  R+     SG+  +     ++FP KQA TAASL LTGD+IAQL+ RW+    G
Sbjct: 14  WNPLPQSRRRRIRSNSGSADAAGGGGYRFPVKQAVTAASLALTGDTIAQLSHRWRKAKEG 73

Query: 164 --SDNKDIMATLLSNYDWIRALRMTSYGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXX 337
             S ++D +   LS++DW+RALRMTSYGFLLYGPGS AWY+ LD  LPKPTV+       
Sbjct: 74  GGSVSQDELWRYLSDHDWLRALRMTSYGFLLYGPGSYAWYQCLDHCLPKPTVQNLVLKVV 133

Query: 338 XXXXXXGPSIIAVIFAWNNLWKGRLSELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPL 517
                 GP +IAV+FAWNNLW  +LSELP+ Y++DALPTLLYGFRFW+PVSVLNFWV+PL
Sbjct: 134 LNQIVLGPCVIAVVFAWNNLWLQKLSELPEKYRRDALPTLLYGFRFWIPVSVLNFWVVPL 193

Query: 518 QARVAYMSTCSIFWNFYLSTAMSK 589
           QARVA+MS  S+FWNFYLS+ M+K
Sbjct: 194 QARVAFMSMGSVFWNFYLSSTMTK 217


>ref|XP_002332407.1| predicted protein [Populus trichocarpa] gi|222832340|gb|EEE70817.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  241 bits (616), Expect = 1e-61
 Identities = 113/187 (60%), Positives = 139/187 (74%), Gaps = 13/187 (6%)
 Frame = +2

Query: 68  FPFKQAATAASLTLTGDSIAQLTSRWKTIPPG-------------SDNKDIMATLLSNYD 208
           FP KQA TA +L LTGD++AQ+T RWK   P              +DN+D +   LS++D
Sbjct: 45  FPLKQAVTAGALALTGDTVAQVTDRWKKNKPSKRHSYDQDASQNSNDNQDFIGIFLSDHD 104

Query: 209 WIRALRMTSYGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAW 388
           W+RALRMTSYGFLLYGPGS AWY+YLD  LPK TV+             GPS+IAV+FAW
Sbjct: 105 WLRALRMTSYGFLLYGPGSYAWYQYLDCCLPKQTVKNLMLKVLLNQIVLGPSVIAVVFAW 164

Query: 389 NNLWKGRLSELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFY 568
           NNLW+G+LS+LP+ YQ+DALPTLLYGFRFW+PVSVLNFW +P+QARVA+MST SIFWNF 
Sbjct: 165 NNLWQGKLSQLPEKYQRDALPTLLYGFRFWIPVSVLNFWAVPIQARVAFMSTGSIFWNFC 224

Query: 569 LSTAMSK 589
           LS+ ++K
Sbjct: 225 LSSTLNK 231


>ref|XP_003607501.1| Protein Mpv17 [Medicago truncatula] gi|355508556|gb|AES89698.1|
           Protein Mpv17 [Medicago truncatula]
          Length = 219

 Score =  239 bits (609), Expect = 7e-61
 Identities = 114/183 (62%), Positives = 139/183 (75%), Gaps = 2/183 (1%)
 Frame = +2

Query: 47  AVVSKFKFPFKQAATAASLTLTGDSIAQLTSRWKTIPPGSDN--KDIMATLLSNYDWIRA 220
           AV   ++FP KQA TAASLTLTGD+IAQL++RW       +N  +D+++ LLS +D +RA
Sbjct: 37  AVGGGYQFPLKQALTAASLTLTGDTIAQLSNRWNKAKESGENASQDVLSKLLSEHDLLRA 96

Query: 221 LRMTSYGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAWNNLW 400
           LRMTSYGFL YGPGS AWY+ LD  LPKP V+             GP +IAVIFAWNNLW
Sbjct: 97  LRMTSYGFLFYGPGSFAWYQLLDHCLPKPNVQNLMLKVLLNQVVLGPCVIAVIFAWNNLW 156

Query: 401 KGRLSELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFYLSTA 580
           + +LSELP+ Y++DALPTLLYGFRFW+PVSVLNFWV+PL ARV +MS  SIFWNFYLS+ 
Sbjct: 157 QQKLSELPEKYKRDALPTLLYGFRFWIPVSVLNFWVVPLPARVGFMSMGSIFWNFYLSST 216

Query: 581 MSK 589
           M+K
Sbjct: 217 MNK 219


>ref|XP_002456297.1| hypothetical protein SORBIDRAFT_03g033650 [Sorghum bicolor]
           gi|241928272|gb|EES01417.1| hypothetical protein
           SORBIDRAFT_03g033650 [Sorghum bicolor]
          Length = 241

 Score =  238 bits (608), Expect = 1e-60
 Identities = 115/178 (64%), Positives = 135/178 (75%), Gaps = 3/178 (1%)
 Frame = +2

Query: 65  KFPFKQAATAASLTLTGDSIAQLTSRW---KTIPPGSDNKDIMATLLSNYDWIRALRMTS 235
           +FPF+QA TAASLT TGD+IAQ+ SR    +     SD K+++  +L N+DWIRALRM S
Sbjct: 64  EFPFRQAVTAASLTFTGDTIAQVRSRIVDRRRCCADSDTKELIPDILLNHDWIRALRMAS 123

Query: 236 YGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAWNNLWKGRLS 415
           YGFLLYGPGS AWY+ LDR +PK T               GP +IAVIFAWNNLW G+LS
Sbjct: 124 YGFLLYGPGSYAWYQLLDRCMPKQTFVNLSAKVILNQIVLGPCVIAVIFAWNNLWLGKLS 183

Query: 416 ELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFYLSTAMSK 589
           ELP  YQ DALPTLLYGF+FW+PVS++NFWVIPL ARVA+MS+CSIFWNFYLST MSK
Sbjct: 184 ELPAKYQNDALPTLLYGFKFWIPVSIVNFWVIPLPARVAFMSSCSIFWNFYLSTTMSK 241


>ref|XP_002881872.1| peroxisomal membrane 22 kDa family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327711|gb|EFH58131.1| peroxisomal
           membrane 22 kDa family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 232

 Score =  238 bits (607), Expect = 1e-60
 Identities = 115/181 (63%), Positives = 136/181 (75%), Gaps = 5/181 (2%)
 Frame = +2

Query: 62  FKFPFKQAATAASLTLTGDSIAQLTSRWK---TIPPGSDNKDI--MATLLSNYDWIRALR 226
           ++FP KQA TA +LT TGD+IAQL+ RWK    +   S   D   +  + S +DWIRALR
Sbjct: 52  YRFPLKQAVTAGALTFTGDTIAQLSGRWKKRTALKQSSSELDEGELWNIFSEHDWIRALR 111

Query: 227 MTSYGFLLYGPGSDAWYRYLDRTLPKPTVEXXXXXXXXXXXXXGPSIIAVIFAWNNLWKG 406
           M+SYGFLLYGPGS AWY++LD +LPKPT               GPS+IAVIFAWNNLW G
Sbjct: 112 MSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFAWNNLWLG 171

Query: 407 RLSELPDMYQKDALPTLLYGFRFWVPVSVLNFWVIPLQARVAYMSTCSIFWNFYLSTAMS 586
           +LSEL + YQKDALPTLLYGFRFWVPVS+LNFWV+PLQARVA+MS  S+FWNFYLS+ MS
Sbjct: 172 KLSELGNKYQKDALPTLLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWNFYLSSTMS 231

Query: 587 K 589
           K
Sbjct: 232 K 232


Top