BLASTX nr result

ID: Coptis25_contig00015338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015338
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194855.2| sequence-specific DNA binding transcription fac...    78   5e-12
emb|CAA16530.1| hypothetical protein [Arabidopsis thaliana] gi|7...    78   5e-12
emb|CBI20803.3| unnamed protein product [Vitis vinifera]               76   2e-11
ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255...    76   2e-11
ref|XP_002867306.1| predicted protein [Arabidopsis lyrata subsp....    74   5e-11

>ref|NP_194855.2| sequence-specific DNA binding transcription factor [Arabidopsis
            thaliana] gi|26452367|dbj|BAC43269.1| unknown protein
            [Arabidopsis thaliana] gi|28950855|gb|AAO63351.1|
            At4g31270 [Arabidopsis thaliana]
            gi|332660484|gb|AEE85884.1| sequence-specific DNA binding
            transcription factor [Arabidopsis thaliana]
          Length = 294

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = -3

Query: 1026 SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 856
            S+ AP W + +  VLVNE+A VE+D +  +S   KW  I++NCNAL VSR+LNQCRRKW+
Sbjct: 13   SQVAPEWAVKDCLVLVNEIAAVEADCSNALSSFQKWTMITENCNALDVSRNLNQCRRKWD 72

Query: 855  LLFDQYSR 832
             L   Y++
Sbjct: 73   SLMSDYNQ 80


>emb|CAA16530.1| hypothetical protein [Arabidopsis thaliana]
            gi|7270029|emb|CAB79845.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 291

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = -3

Query: 1026 SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 856
            S+ AP W + +  VLVNE+A VE+D +  +S   KW  I++NCNAL VSR+LNQCRRKW+
Sbjct: 13   SQVAPEWAVKDCLVLVNEIAAVEADCSNALSSFQKWTMITENCNALDVSRNLNQCRRKWD 72

Query: 855  LLFDQYSR 832
             L   Y++
Sbjct: 73   SLMSDYNQ 80


>emb|CBI20803.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = -3

Query: 1026 SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 856
            S+ AP+WT+ +  +LVNE+A VE +    +S   KWK I++NC AL VSR+ NQCRRKW+
Sbjct: 19   SQLAPDWTINDSLILVNEIAAVEGECLNALSTYQKWKIIAENCTALDVSRTFNQCRRKWD 78

Query: 855  LLFDQYSR 832
             L  +Y++
Sbjct: 79   SLLFEYNK 86



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 13/121 (10%)
 Frame = -2

Query: 652 LPLLFDKDLFGSIEEAVQAQE---ETDTDSDPNF------TLTKSGLKKKRRWQIPRESK 500
           LP+ F+++LF +I++ V +QE   +TD  +DP         + + G KK++R ++P+++ 
Sbjct: 112 LPVDFERELFKAIDDLVSSQEVRSDTDPGTDPEAEDDRLEVIAEYGPKKQKRREMPQKTT 171

Query: 499 N-DEKDDEMAVKLREQARLVHAILRG---DPECSSYSDMKGPGESQLEFKRWQGNELIKV 332
           + +EK+  M +KLRE A L+ AI++G   D         K     Q +FKR QG++LI  
Sbjct: 172 SLEEKEQMMVMKLRENADLIDAIVKGNLVDSVDFGLGGSKNRETLQADFKRRQGDKLIAC 231

Query: 331 L 329
           L
Sbjct: 232 L 232


>ref|XP_002283217.1| PREDICTED: uncharacterized protein LOC100255883 isoform 1 [Vitis
            vinifera] gi|359476329|ref|XP_003631820.1| PREDICTED:
            uncharacterized protein LOC100255883 isoform 2 [Vitis
            vinifera]
          Length = 274

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
 Frame = -3

Query: 1026 SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 856
            S+ AP+WT+ +  +LVNE+A VE +    +S   KWK I++NC AL VSR+ NQCRRKW+
Sbjct: 43   SQLAPDWTINDSLILVNEIAAVEGECLNALSTYQKWKIIAENCTALDVSRTFNQCRRKWD 102

Query: 855  LLFDQYSR 832
             L  +Y++
Sbjct: 103  SLLFEYNK 110



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 13/121 (10%)
 Frame = -2

Query: 652 LPLLFDKDLFGSIEEAVQAQE---ETDTDSDPNF------TLTKSGLKKKRRWQIPRESK 500
           LP+ F+++LF +I++ V +QE   +TD  +DP         + + G KK++R ++P+++ 
Sbjct: 136 LPVDFERELFKAIDDLVSSQEVRSDTDPGTDPEAEDDRLEVIAEYGPKKQKRREMPQKTT 195

Query: 499 N-DEKDDEMAVKLREQARLVHAILRG---DPECSSYSDMKGPGESQLEFKRWQGNELIKV 332
           + +EK+  M +KLRE A L+ AI++G   D         K     Q +FKR QG++LI  
Sbjct: 196 SLEEKEQMMVMKLRENADLIDAIVKGNLVDSVDFGLGGSKNRETLQADFKRRQGDKLIAC 255

Query: 331 L 329
           L
Sbjct: 256 L 256


>ref|XP_002867306.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297313142|gb|EFH43565.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 297

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
 Frame = -3

Query: 1026 SKAAPNWTLGEMFVLVNEVATVESDSTKTIS---KWKHISDNCNALGVSRSLNQCRRKWE 856
            S+ AP W + +  +LVNE+A VE+D +  +S   KW  I +NCNAL V R+LNQCRRKW+
Sbjct: 13   SQVAPEWAVKDCLILVNEIAAVEADCSNALSSFQKWTMILENCNALDVRRNLNQCRRKWD 72

Query: 855  LLFDQYSR 832
             L   Y++
Sbjct: 73   SLMSDYNQ 80


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