BLASTX nr result

ID: Coptis25_contig00015337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015337
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36091.3| unnamed protein product [Vitis vinifera]              293   8e-77
ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloproteas...   293   8e-77
ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata] g...   286   1e-74
ref|XP_002303302.1| predicted protein [Populus trichocarpa] gi|2...   285   2e-74
ref|XP_002515987.1| Cell division protein ftsH, putative [Ricinu...   285   2e-74

>emb|CBI36091.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  293 bits (750), Expect = 8e-77
 Identities = 142/180 (78%), Positives = 163/180 (90%)
 Frame = -1

Query: 1454 ITISPRAGRELGYVRVKMDHVKFKEGLLSRQSLLDHITVQLAPRAADEIWYGENKLSTIW 1275
            +TISPRAGRELGYVR+KMDH+KFKEG+LSRQSLLDHITVQLAPRAADEIWYGE++LSTIW
Sbjct: 719  VTISPRAGRELGYVRMKMDHIKFKEGMLSRQSLLDHITVQLAPRAADEIWYGEDQLSTIW 778

Query: 1274 AETGDNARSAARSFVLGGLSEKHHGLSDFWVADRLNEIDLEALRILNMCYLRAKEILQRN 1095
            AET DNARSAAR+FVLGGLSEKH GLS FWVADR+N+IDLEALRIL +CY RAKEIL++N
Sbjct: 779  AETADNARSAARTFVLGGLSEKHQGLSSFWVADRINDIDLEALRILEVCYERAKEILKQN 838

Query: 1094 RTLMDAVVSELIQKKNLSKREFFHLVNVHGSLEPVPPSILDIRVAKRMQLQATLMGNETA 915
            R LMDAVV EL+QKK+L+K+EFF LV VHGSL+P+PP+ILDIR AKR+Q Q  +M    A
Sbjct: 839  RKLMDAVVDELVQKKSLTKQEFFRLVEVHGSLKPMPPNILDIRAAKRIQFQERMMSQREA 898


>ref|XP_002278786.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH-like [Vitis
            vinifera]
          Length = 888

 Score =  293 bits (750), Expect = 8e-77
 Identities = 142/180 (78%), Positives = 163/180 (90%)
 Frame = -1

Query: 1454 ITISPRAGRELGYVRVKMDHVKFKEGLLSRQSLLDHITVQLAPRAADEIWYGENKLSTIW 1275
            +TISPRAGRELGYVR+KMDH+KFKEG+LSRQSLLDHITVQLAPRAADEIWYGE++LSTIW
Sbjct: 703  VTISPRAGRELGYVRMKMDHIKFKEGMLSRQSLLDHITVQLAPRAADEIWYGEDQLSTIW 762

Query: 1274 AETGDNARSAARSFVLGGLSEKHHGLSDFWVADRLNEIDLEALRILNMCYLRAKEILQRN 1095
            AET DNARSAAR+FVLGGLSEKH GLS FWVADR+N+IDLEALRIL +CY RAKEIL++N
Sbjct: 763  AETADNARSAARTFVLGGLSEKHQGLSSFWVADRINDIDLEALRILEVCYERAKEILKQN 822

Query: 1094 RTLMDAVVSELIQKKNLSKREFFHLVNVHGSLEPVPPSILDIRVAKRMQLQATLMGNETA 915
            R LMDAVV EL+QKK+L+K+EFF LV VHGSL+P+PP+ILDIR AKR+Q Q  +M    A
Sbjct: 823  RKLMDAVVDELVQKKSLTKQEFFRLVEVHGSLKPMPPNILDIRAAKRIQFQERMMSQREA 882


>ref|XP_002885132.1| EMB2083 [Arabidopsis lyrata subsp. lyrata]
            gi|297330972|gb|EFH61391.1| EMB2083 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 874

 Score =  286 bits (731), Expect = 1e-74
 Identities = 135/175 (77%), Positives = 164/175 (93%)
 Frame = -1

Query: 1454 ITISPRAGRELGYVRVKMDHVKFKEGLLSRQSLLDHITVQLAPRAADEIWYGENKLSTIW 1275
            +TI+PRAGRELGYVRVKMDH+KFKEG+LSRQS+LDHITVQLAPRAADE+WYGE++LSTIW
Sbjct: 689  LTINPRAGRELGYVRVKMDHIKFKEGMLSRQSILDHITVQLAPRAADELWYGEDQLSTIW 748

Query: 1274 AETGDNARSAARSFVLGGLSEKHHGLSDFWVADRLNEIDLEALRILNMCYLRAKEILQRN 1095
            AET DNARSAARS VLGGLS+KHHGL++FWVADR+N+IDLEALRILNMCY RAKEIL RN
Sbjct: 749  AETSDNARSAARSLVLGGLSDKHHGLNNFWVADRINDIDLEALRILNMCYERAKEILGRN 808

Query: 1094 RTLMDAVVSELIQKKNLSKREFFHLVNVHGSLEPVPPSILDIRVAKRMQLQATLM 930
            RTLMD VV +L+QKK+LSK+EFF LV ++GS++P+PPSIL++R  KR++L+ T++
Sbjct: 809  RTLMDEVVEKLVQKKSLSKQEFFTLVELYGSIKPMPPSILELRKIKRLELEETVL 863


>ref|XP_002303302.1| predicted protein [Populus trichocarpa] gi|222840734|gb|EEE78281.1|
            predicted protein [Populus trichocarpa]
          Length = 844

 Score =  285 bits (730), Expect = 2e-74
 Identities = 140/180 (77%), Positives = 163/180 (90%), Gaps = 1/180 (0%)
 Frame = -1

Query: 1454 ITISPRAGRELGYVRVKMDHVKFKEGLLSRQSLLDHITVQLAPRAADEIWYGENKLSTIW 1275
            +TI+PRAGRELGYVR+KMDHVKFKEG+LSRQSLLDHITVQLAPRAADE+WYGE +LSTIW
Sbjct: 664  VTIAPRAGRELGYVRMKMDHVKFKEGMLSRQSLLDHITVQLAPRAADELWYGEGQLSTIW 723

Query: 1274 AETGDNARSAARSFVLGGLSEKHHGLSDFWVADRLNEIDLEALRILNMCYLRAKEILQRN 1095
            AET DNARSAARS+VLGGLSEKHHGLS+FW ADR+NEIDLEALR++N CY  AKEILQ+N
Sbjct: 724  AETADNARSAARSYVLGGLSEKHHGLSNFWAADRINEIDLEALRVMNFCYDGAKEILQQN 783

Query: 1094 RTLMDAVVSELIQKKNLSKREFFHLVNVHGSLEPVPPSILDIRVAKRMQLQATLM-GNET 918
            R LMDAVV EL++KK+L+K+EFF+LV +HG ++P+PPSIL IRVAKR Q Q  L+  NET
Sbjct: 784  RKLMDAVVDELVRKKSLTKQEFFNLVELHGVIKPMPPSILYIRVAKRAQFQEMLVHQNET 843


>ref|XP_002515987.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223544892|gb|EEF46407.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 884

 Score =  285 bits (729), Expect = 2e-74
 Identities = 137/185 (74%), Positives = 163/185 (88%)
 Frame = -1

Query: 1454 ITISPRAGRELGYVRVKMDHVKFKEGLLSRQSLLDHITVQLAPRAADEIWYGENKLSTIW 1275
            +TISPRAGRELGYVR+KMDHVKFKEG+LSRQSLLDHITVQ+APRAADE+WYGE +LSTIW
Sbjct: 700  VTISPRAGRELGYVRMKMDHVKFKEGMLSRQSLLDHITVQMAPRAADELWYGEGQLSTIW 759

Query: 1274 AETGDNARSAARSFVLGGLSEKHHGLSDFWVADRLNEIDLEALRILNMCYLRAKEILQRN 1095
            AET DNARSAAR++VLGGLSEKH+G  DFWVADR+NEIDLEALRILN+CY +AKEILQRN
Sbjct: 760  AETADNARSAARTYVLGGLSEKHYGQFDFWVADRINEIDLEALRILNLCYEQAKEILQRN 819

Query: 1094 RTLMDAVVSELIQKKNLSKREFFHLVNVHGSLEPVPPSILDIRVAKRMQLQATLMGNETA 915
              LMDAVV EL+QKK+L+K+EFFHLV ++GS++P+P SILD+R AKR + Q  +M  +  
Sbjct: 820  HKLMDAVVDELVQKKSLTKQEFFHLVELYGSIKPMPLSILDLRAAKREEFQKMMMNQKEK 879

Query: 914  RRSGV 900
              S +
Sbjct: 880  TASNL 884


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