BLASTX nr result

ID: Coptis25_contig00015335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015335
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP...   204   8e-51
ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Viti...   202   3e-50
emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]   202   3e-50
ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter pr...   201   5e-50
ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricin...   200   1e-49

>ref|XP_003554757.1| PREDICTED: LOW QUALITY PROTEIN: probable UDP-sugar transporter
           protein SLC35A4-like [Glycine max]
          Length = 335

 Score =  204 bits (518), Expect = 8e-51
 Identities = 99/154 (64%), Positives = 115/154 (74%)
 Frame = -2

Query: 468 FGAIFNMVKLLSDDFRGGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNI 289
           FG +FNM +LL+DDFRGGFENGPWWQR+FNGY +TTWMVVLNLGSTGLLVSWLMK+ADNI
Sbjct: 201 FGTLFNMARLLADDFRGGFENGPWWQRIFNGYTITTWMVVLNLGSTGLLVSWLMKHADNI 260

Query: 288 VKVYSTSMAMLLTXXXXXXXXXXXXXXXXXXVYSTSMAMLLTMVLSVYLFNFKPTLQLFL 109
           VKVYSTSM                             AMLLTM+LS++LFNFKPTLQLFL
Sbjct: 261 VKVYSTSM-----------------------------AMLLTMILSLFLFNFKPTLQLFL 291

Query: 108 GIVICMMSLHMYFAPASMLVDLPVAAKTDLDRYL 7
           GI+ICMMSLHMYFAP +ML+D+P   K D ++ +
Sbjct: 292 GIIICMMSLHMYFAPPNMLLDMPXTVKPDEEKLI 325


>ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Vitis vinifera]
           gi|297745398|emb|CBI40478.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  202 bits (513), Expect = 3e-50
 Identities = 102/148 (68%), Positives = 111/148 (75%)
 Frame = -2

Query: 468 FGAIFNMVKLLSDDFRGGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNI 289
           FGAIFNM +L+ DD+R GFE GPWW RLFNGY++TTWMVVLNLGSTGLLVSWLMKYADNI
Sbjct: 201 FGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTTWMVVLNLGSTGLLVSWLMKYADNI 260

Query: 288 VKVYSTSMAMLLTXXXXXXXXXXXXXXXXXXVYSTSMAMLLTMVLSVYLFNFKPTLQLFL 109
           VKVYSTSM                             AMLLTMVLSV+LFNFKPTLQLFL
Sbjct: 261 VKVYSTSM-----------------------------AMLLTMVLSVFLFNFKPTLQLFL 291

Query: 108 GIVICMMSLHMYFAPASMLVDLPVAAKT 25
           GIVICMMSLHMYFAP +MLVDLP+  K+
Sbjct: 292 GIVICMMSLHMYFAPPTMLVDLPLTVKS 319


>emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]
          Length = 392

 Score =  202 bits (513), Expect = 3e-50
 Identities = 102/148 (68%), Positives = 111/148 (75%)
 Frame = -2

Query: 468 FGAIFNMVKLLSDDFRGGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNI 289
           FGAIFNM +L+ DD+R GFE GPWW RLFNGY++TTWMVVLNLGSTGLLVSWLMKYADNI
Sbjct: 262 FGAIFNMARLILDDYRSGFEKGPWWHRLFNGYSVTTWMVVLNLGSTGLLVSWLMKYADNI 321

Query: 288 VKVYSTSMAMLLTXXXXXXXXXXXXXXXXXXVYSTSMAMLLTMVLSVYLFNFKPTLQLFL 109
           VKVYSTSM                             AMLLTMVLSV+LFNFKPTLQLFL
Sbjct: 322 VKVYSTSM-----------------------------AMLLTMVLSVFLFNFKPTLQLFL 352

Query: 108 GIVICMMSLHMYFAPASMLVDLPVAAKT 25
           GIVICMMSLHMYFAP +MLVDLP+  K+
Sbjct: 353 GIVICMMSLHMYFAPPTMLVDLPLTVKS 380


>ref|XP_003521799.1| PREDICTED: probable UDP-sugar transporter protein SLC35A4-like
           [Glycine max]
          Length = 335

 Score =  201 bits (511), Expect = 5e-50
 Identities = 98/154 (63%), Positives = 114/154 (74%)
 Frame = -2

Query: 468 FGAIFNMVKLLSDDFRGGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNI 289
           FG  FNM +LL+DDFRGGFENGPWWQR+FNGY +TTWMVVLNLGSTGLLVSWLMK+ADNI
Sbjct: 201 FGTFFNMARLLADDFRGGFENGPWWQRIFNGYTITTWMVVLNLGSTGLLVSWLMKHADNI 260

Query: 288 VKVYSTSMAMLLTXXXXXXXXXXXXXXXXXXVYSTSMAMLLTMVLSVYLFNFKPTLQLFL 109
           VKVYSTSM                             AMLLTM+LS++LFNFKPTLQLFL
Sbjct: 261 VKVYSTSM-----------------------------AMLLTMILSLFLFNFKPTLQLFL 291

Query: 108 GIVICMMSLHMYFAPASMLVDLPVAAKTDLDRYL 7
           GI+ICMMSLHMYFAP ++L+D P+  K D ++ +
Sbjct: 292 GIIICMMSLHMYFAPPNLLLDKPLTVKLDEEKLI 325


>ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricinus communis]
           gi|223527620|gb|EEF29733.1| cmp-sialic acid transporter,
           putative [Ricinus communis]
          Length = 335

 Score =  200 bits (508), Expect = 1e-49
 Identities = 102/149 (68%), Positives = 108/149 (72%)
 Frame = -2

Query: 468 FGAIFNMVKLLSDDFRGGFENGPWWQRLFNGYNMTTWMVVLNLGSTGLLVSWLMKYADNI 289
           FGAIFNM +LL DDFRGGFE GPWWQRLF+GY +TTWMVVLNLG +GLLVSWLMKYADNI
Sbjct: 201 FGAIFNMARLLLDDFRGGFEKGPWWQRLFSGYTITTWMVVLNLGCSGLLVSWLMKYADNI 260

Query: 288 VKVYSTSMAMLLTXXXXXXXXXXXXXXXXXXVYSTSMAMLLTMVLSVYLFNFKPTLQLFL 109
           VKVYSTSM                             AMLLTMVLSV+LFNF PTLQLFL
Sbjct: 261 VKVYSTSM-----------------------------AMLLTMVLSVFLFNFSPTLQLFL 291

Query: 108 GIVICMMSLHMYFAPASMLVDLPVAAKTD 22
           GI+ICMMSLHMYFAP  MLVDLP   K D
Sbjct: 292 GIIICMMSLHMYFAPPGMLVDLPSMGKAD 320


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