BLASTX nr result
ID: Coptis25_contig00015334
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00015334 (614 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI35966.3| unnamed protein product [Vitis vinifera] 327 1e-87 emb|CAN68531.1| hypothetical protein VITISV_011920 [Vitis vinifera] 225 4e-57 ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 223 2e-56 gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays] 223 3e-56 ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containi... 222 4e-56 >emb|CBI35966.3| unnamed protein product [Vitis vinifera] Length = 624 Score = 327 bits (838), Expect = 1e-87 Identities = 156/204 (76%), Positives = 183/204 (89%) Frame = +1 Query: 1 DMYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEI 180 DMYSKCG VEKA R+FDG+S KNL SWNA++TG VQ GLLE+AI L+ M+ + VKPNEI Sbjct: 271 DMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEI 330 Query: 181 TMVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKT 360 T+VNVLSACAGLGALE GR++HLY+GRNGLD NVILATAL+DMY+KCG +DDACL+FVKT Sbjct: 331 TLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKT 390 Query: 361 TYKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEGR 540 + KDVALWNAMIL AYHG+G DSLAVF+QM R+GV+PND+TFIGVLSACNHSGLVEEGR Sbjct: 391 SEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGR 450 Query: 541 LQFSNLPLKYGLSPKVEHYACMVD 612 +QFS++ K+GLSPK+EHYACMVD Sbjct: 451 VQFSSMADKHGLSPKLEHYACMVD 474 Score = 133 bits (335), Expect = 2e-29 Identities = 78/181 (43%), Positives = 108/181 (59%), Gaps = 3/181 (1%) Frame = +1 Query: 7 YSKCGQVEKARRLFDGMS-GKNLVSWNAMLTGYVQRGLLEDAIQLF--CLMRYKLVKPNE 177 Y + GQVEKAR LF+ M +N+V W AM+ GY + G + + LF L+ V+PN Sbjct: 169 YVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNA 228 Query: 178 ITMVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVK 357 TMV +LSAC+ L E GR + ++I N + N IL TALIDMYSKCG V+ A +F Sbjct: 229 ATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDG 288 Query: 358 TTYKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEG 537 + K++ WNA+I G +++ ++ MK VKPN+IT + VLSAC G +E G Sbjct: 289 VSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELG 348 Query: 538 R 540 R Sbjct: 349 R 349 Score = 77.8 bits (190), Expect = 1e-12 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 34/206 (16%) Frame = +1 Query: 25 VEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEITMVNVLSA 204 ++ AR + D SWN+++ Y G ++++ L+ M KP+ T VL A Sbjct: 43 IDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKA 102 Query: 205 CAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTTYKD---- 372 C+ LG++ G IH ++ R G +++ + +LIDMY KC +D A + ++D Sbjct: 103 CSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSW 162 Query: 373 ----------------------------VALWNAMILCFAYHGNGNDSLAVFAQMKRSG- 465 V W AMI + G+ + L++F QM S Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222 Query: 466 -VKPNDITFIGVLSACNHSGLVEEGR 540 V+PN T + +LSAC+ E GR Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVGR 248 Score = 55.1 bits (131), Expect = 1e-05 Identities = 35/99 (35%), Positives = 51/99 (51%) Frame = +1 Query: 241 IHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTTYKDVALWNAMILCFAYHGN 420 IH +GL L LID++S +D A V +T WN++I + HG+ Sbjct: 18 IHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHGS 73 Query: 421 GNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEG 537 +SL ++ +M RS KP++ TF VL AC+ G V EG Sbjct: 74 PQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEG 112 >emb|CAN68531.1| hypothetical protein VITISV_011920 [Vitis vinifera] Length = 435 Score = 225 bits (574), Expect = 4e-57 Identities = 118/200 (59%), Positives = 144/200 (72%) Frame = +1 Query: 13 KCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEITMVN 192 KCG VEKA R+FDG+S K L SWNA ++ Y Q GLLE+AI L+CLM+ + K NEI Sbjct: 185 KCGDVEKAWRIFDGVSCKKLPSWNAXISEYAQCGLLEEAIDLYCLMKAQSXKXNEIM--- 241 Query: 193 VLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTTYKD 372 LG G + NGL+ NVILAT L+D+Y+KCG +DDACLVFVKT+ KD Sbjct: 242 -------LGHWNLGEKFICTL--NGLELNVILATTLVDVYAKCGKIDDACLVFVKTSEKD 292 Query: 373 VALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEGRLQFS 552 VALWNAMIL AYHG+ M+R+GV+PND+TFIGVLSACNHSGLVEEGR+QFS Sbjct: 293 VALWNAMILGLAYHGD----------MERTGVQPNDVTFIGVLSACNHSGLVEEGRVQFS 342 Query: 553 NLPLKYGLSPKVEHYACMVD 612 ++ K+GLSPK+EH ACM+D Sbjct: 343 SMADKHGLSPKLEHCACMLD 362 Score = 59.3 bits (142), Expect = 5e-07 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Frame = +1 Query: 1 DMYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEI 180 D+Y+KCG+++ A +F S K++ WNAM+ G G +E V+PN++ Sbjct: 270 DVYAKCGKIDDACLVFVKTSEKDVALWNAMILGLAYHGDMERT----------GVQPNDV 319 Query: 181 TMVNVLSACAGLGALEFGR-DIHLYIGRNGLDTNVILATALIDMYSKCGSVDDA 339 T + VLSAC G +E GR ++GL + ++D+ + G + +A Sbjct: 320 TFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHCACMLDLLGRAGHLKEA 373 >ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400 [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera] Length = 618 Score = 223 bits (569), Expect = 2e-56 Identities = 108/205 (52%), Positives = 146/205 (71%), Gaps = 2/205 (0%) Frame = +1 Query: 4 MYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEIT 183 MY KCG + ARR+FD M K++V+WNAM+TGY Q G+ ++AI LF MR V P++IT Sbjct: 271 MYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKIT 330 Query: 184 MVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTT 363 +V VLSACA +GAL+FG+ + Y GL ++ ++TALIDMY+KCGS+DDA VF Sbjct: 331 LVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMP 390 Query: 364 YKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSG--VKPNDITFIGVLSACNHSGLVEEG 537 K+ WNAMI A+HG +SL++F +M + G V+PNDI+FIGVLSAC H+GLV+EG Sbjct: 391 QKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEG 450 Query: 538 RLQFSNLPLKYGLSPKVEHYACMVD 612 R F + +GL PK+EH++CMVD Sbjct: 451 RQLFDLMSSSFGLVPKIEHHSCMVD 475 Score = 157 bits (398), Expect = 1e-36 Identities = 79/179 (44%), Positives = 117/179 (65%) Frame = +1 Query: 4 MYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEIT 183 MYS+CG++ ARR+FD +S K+LVSWN+M++GY + G DA+ LF MR +P+E+T Sbjct: 170 MYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMT 229 Query: 184 MVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTT 363 +V++L AC LG L G I ++ N +D N + +ALI MY KCG + A VF + Sbjct: 230 LVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMV 289 Query: 364 YKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEGR 540 KDV WNAMI +A +G ++++ +F+ M+ SGV P+ IT +GVLSAC G ++ G+ Sbjct: 290 KKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGK 348 Score = 82.4 bits (202), Expect = 6e-14 Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 1/164 (0%) Frame = +1 Query: 34 ARRLFDGMSGKNLVSWNAMLTGYVQRGLLED-AIQLFCLMRYKLVKPNEITMVNVLSACA 210 A LF + N ++N M+ G + I+ + M+ ++PN T V ACA Sbjct: 78 ASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACA 137 Query: 211 GLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTTYKDVALWNA 390 L L G+ H + ++GL + + +LI MYS+CG + A VF + + KD+ WN+ Sbjct: 138 NLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNS 197 Query: 391 MILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSG 522 MI ++ G D++ +F +M+ +G +P+++T + +L AC G Sbjct: 198 MISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLG 241 Score = 75.9 bits (185), Expect = 5e-12 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 3/116 (2%) Frame = +1 Query: 1 DMYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYK--LVKPN 174 DMY+KCG ++ A R+F+ M KN VSWNAM++ G ++++ LF M + V+PN Sbjct: 371 DMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPN 430 Query: 175 EITMVNVLSACAGLGALEFGRDI-HLYIGRNGLDTNVILATALIDMYSKCGSVDDA 339 +I+ + VLSAC G ++ GR + L GL + + ++D+ ++ G V +A Sbjct: 431 DISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEA 486 >gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays] Length = 694 Score = 223 bits (567), Expect = 3e-56 Identities = 103/204 (50%), Positives = 143/204 (70%) Frame = +1 Query: 1 DMYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEI 180 DMY+KCG++ KARRLFDGM +++V+W+AM++GY Q +A+ LF M+ V+PN++ Sbjct: 264 DMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323 Query: 181 TMVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKT 360 TMV+VLSACA LGALE G+ +H Y+ R L IL TAL+D Y+KCG +DDA F Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESM 383 Query: 361 TYKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEGR 540 K+ W A+I A +G G ++L +F+ M+ +G++P D+TFIGVL AC+HS LVEEGR Sbjct: 384 PVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGR 443 Query: 541 LQFSNLPLKYGLSPKVEHYACMVD 612 F ++ YG+ P+VEHY CMVD Sbjct: 444 RHFDSMARDYGIKPRVEHYGCMVD 467 Score = 125 bits (313), Expect = 8e-27 Identities = 63/179 (35%), Positives = 105/179 (58%) Frame = +1 Query: 4 MYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEIT 183 MY+ CG V AR +FD +V WNA++ Y++ G + +++F M V +E+T Sbjct: 164 MYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVT 223 Query: 184 MVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTT 363 +V+V++AC +G + G+ + ++ GL N L TAL+DMY+KCG + A +F Sbjct: 224 LVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQ 283 Query: 364 YKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEGR 540 +DV W+AMI + ++L +F++M+ + V+PND+T + VLSAC G +E G+ Sbjct: 284 SRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGK 342 Score = 80.1 bits (196), Expect = 3e-13 Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 2/156 (1%) Frame = +1 Query: 79 WNAMLTGYVQRGLLEDAIQLFCLMRY--KLVKPNEITMVNVLSACAGLGALEFGRDIHLY 252 +N ++ ++ G EDA+ LF M + ++ T L +C+ + AL+ GR + Y Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145 Query: 253 IGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTTYKDVALWNAMILCFAYHGNGNDS 432 + GL + + ++LI MY+ CG V A LVF V +WNA++ + +G+ + Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205 Query: 433 LAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEGR 540 + +F M GV +++T + V++AC G + G+ Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGK 241 >ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400-like [Cucumis sativus] Length = 619 Score = 222 bits (566), Expect = 4e-56 Identities = 104/205 (50%), Positives = 140/205 (68%), Gaps = 2/205 (0%) Frame = +1 Query: 4 MYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEIT 183 MY KCG + ARR+FD M K+ V+WNAM+TGY Q G+ E+AI+LF MR P++IT Sbjct: 272 MYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQIT 331 Query: 184 MVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTT 363 ++ +LSACA +GAL+ G+ + +Y G +V + TAL+DMY+KCGS+D+A VF Sbjct: 332 LIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMP 391 Query: 364 YKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSG--VKPNDITFIGVLSACNHSGLVEEG 537 K+ WNAMI A+HG ++LA+F M G V PNDITF+GVLSAC H+GLV+EG Sbjct: 392 KKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEG 451 Query: 538 RLQFSNLPLKYGLSPKVEHYACMVD 612 R F + +GL PK+EHY+CMVD Sbjct: 452 RRLFHMMSSSFGLVPKIEHYSCMVD 476 Score = 139 bits (349), Expect = 5e-31 Identities = 69/179 (38%), Positives = 109/179 (60%) Frame = +1 Query: 4 MYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYKLVKPNEIT 183 MY++CG++ AR++FD +S K+LVSWN+M++GY + +A+ LF M +PNE++ Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230 Query: 184 MVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALIDMYSKCGSVDDACLVFVKTT 363 +V+VL AC LG L+ G + ++ N + N + +ALI MY KCG + A +F Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290 Query: 364 YKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDITFIGVLSACNHSGLVEEGR 540 KD WNAMI +A +G +++ +F M+ S P+ IT IG+LSAC G ++ G+ Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGK 349 Score = 91.3 bits (225), Expect = 1e-16 Identities = 45/137 (32%), Positives = 83/137 (60%) Frame = +1 Query: 127 AIQLFCLMRYKLVKPNEITMVNVLSACAGLGALEFGRDIHLYIGRNGLDTNVILATALID 306 A++ + M++ +KPN +T + AC+ L A+E GR H + R GLD + ++ +LI Sbjct: 111 ALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLIT 170 Query: 307 MYSKCGSVDDACLVFVKTTYKDVALWNAMILCFAYHGNGNDSLAVFAQMKRSGVKPNDIT 486 MY++CG + DA VF + + KD+ WN+MI ++ + +++ +F +M +G +PN+++ Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230 Query: 487 FIGVLSACNHSGLVEEG 537 + VL AC G ++ G Sbjct: 231 LVSVLGACGELGDLKLG 247 Score = 84.0 bits (206), Expect = 2e-14 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 3/116 (2%) Frame = +1 Query: 1 DMYSKCGQVEKARRLFDGMSGKNLVSWNAMLTGYVQRGLLEDAIQLFCLMRYK--LVKPN 174 DMY+KCG ++ A R+F GM KN VSWNAM++ G ++A+ LF M + V PN Sbjct: 372 DMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPN 431 Query: 175 EITMVNVLSACAGLGALEFGRDI-HLYIGRNGLDTNVILATALIDMYSKCGSVDDA 339 +IT V VLSAC G ++ GR + H+ GL + + ++D++S+ G +++A Sbjct: 432 DITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEA 487