BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015333
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531694.1| pentatricopeptide repeat-containing protein,...   116   2e-24
ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]   109   3e-22
ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19

>ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528670|gb|EEF30685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 821

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/79 (64%), Positives = 65/79 (82%)
 Frame = -2

Query: 242 ALEFFNAMVIEGFEPRLFIFKALICALCKVSKLEDAQTLFESMLSKQWNPDEIVWTVLID 63
           ALE FN M ++GF+P LFI+K LICALC VS+ E+A  +F+S+L KQWN D IVWTVL+D
Sbjct: 702 ALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVD 761

Query: 62  GLLKEGQSEACMKFLHIME 6
           GLL+EG S+ CMKFL++ME
Sbjct: 762 GLLQEGDSDLCMKFLYLME 780


>ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/79 (60%), Positives = 65/79 (82%)
 Frame = -2

Query: 242 ALEFFNAMVIEGFEPRLFIFKALICALCKVSKLEDAQTLFESMLSKQWNPDEIVWTVLID 63
           AL+ F+++  +GF+  L I++ALICALCK  ++E+AQ LF++ML K+WN DEIVWTVL+D
Sbjct: 703 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 762

Query: 62  GLLKEGQSEACMKFLHIME 6
           GLLKEG+ + CMK LHIME
Sbjct: 763 GLLKEGELDLCMKLLHIME 781


>emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/79 (60%), Positives = 65/79 (82%)
 Frame = -2

Query: 242  ALEFFNAMVIEGFEPRLFIFKALICALCKVSKLEDAQTLFESMLSKQWNPDEIVWTVLID 63
            AL+ F+++  +GF+  L I++ALICALCK  ++E+AQ LF++ML K+WN DEIVWTVL+D
Sbjct: 843  ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVD 902

Query: 62   GLLKEGQSEACMKFLHIME 6
            GLLKEG+ + CMK LHIME
Sbjct: 903  GLLKEGELDLCMKLLHIME 921


>ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/79 (56%), Positives = 61/79 (77%)
 Frame = -2

Query: 242 ALEFFNAMVIEGFEPRLFIFKALICALCKVSKLEDAQTLFESMLSKQWNPDEIVWTVLID 63
           AL  F +M   GF+  L  +KALICALCK + +E+AQ +F++ML K WN DE+VWTVL+D
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLD 772

Query: 62  GLLKEGQSEACMKFLHIME 6
           GLLKEG+++ C+K LH+ME
Sbjct: 773 GLLKEGETDLCLKLLHVME 791


>ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
           gi|449530677|ref|XP_004172320.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/79 (55%), Positives = 62/79 (78%)
 Frame = -2

Query: 242 ALEFFNAMVIEGFEPRLFIFKALICALCKVSKLEDAQTLFESMLSKQWNPDEIVWTVLID 63
           AL+ F++MV  GF+P L  +KALICALCK +  + AQ +F++ML K WN DE+VWTVL+D
Sbjct: 707 ALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLD 766

Query: 62  GLLKEGQSEACMKFLHIME 6
           GLLKEG+++  ++ LH+ME
Sbjct: 767 GLLKEGETDLSLELLHVME 785