BLASTX nr result

ID: Coptis25_contig00015327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015327
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267988.1| PREDICTED: uncharacterized protein LOC100255...    83   3e-14
ref|XP_004168837.1| PREDICTED: uncharacterized LOC101208049 [Cuc...    80   2e-13
ref|XP_004135215.1| PREDICTED: uncharacterized protein LOC101208...    80   2e-13
ref|XP_002520192.1| conserved hypothetical protein [Ricinus comm...    76   3e-12
dbj|BAD44313.1| hypothetical protein [Arabidopsis thaliana] gi|5...    75   7e-12

>ref|XP_002267988.1| PREDICTED: uncharacterized protein LOC100255235 [Vitis vinifera]
           gi|296086476|emb|CBI32065.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   ETSRLLR-PIPLSLKKRHYFHPTLHTSIPLSIKADFQKSYKGPKPKKEWIADWVTKNDDT 177
           E  RLLR PIP   K      PT    +  S K+  Q  Y+GPKP+++W+ADWV+ NDDT
Sbjct: 2   EAGRLLRTPIPWRPKLAPS-PPTFPRFVRASSKS--QGRYRGPKPRRDWLADWVSNNDDT 58

Query: 178 VRSLPIYVGGFSLLAVLFNCTVCAV 252
           VRSLPIYVGG SLL+VLFN T+  +
Sbjct: 59  VRSLPIYVGGVSLLSVLFNRTISGI 83


>ref|XP_004168837.1| PREDICTED: uncharacterized LOC101208049 [Cucumis sativus]
          Length = 300

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = +1

Query: 58  HPTLHTSIPLSIKADF---QKSYKGPKPKKEWIADWVTKNDDTVRSLPIYVGGFSLLAVL 228
           H +L  S PL ++A     Q+SY+GPKP    +ADWV+ NDDTVRSLPIYVGG SLL VL
Sbjct: 22  HSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSNNDDTVRSLPIYVGGISLLIVL 81

Query: 229 FNCTVCAV 252
           FN  V  +
Sbjct: 82  FNRAVSGI 89


>ref|XP_004135215.1| PREDICTED: uncharacterized protein LOC101208049 [Cucumis sativus]
          Length = 300

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
 Frame = +1

Query: 58  HPTLHTSIPLSIKADF---QKSYKGPKPKKEWIADWVTKNDDTVRSLPIYVGGFSLLAVL 228
           H +L  S PL ++A     Q+SY+GPKP    +ADWV+ NDDTVRSLPIYVGG SLL VL
Sbjct: 22  HSSLRPSFPLIVRASSSTSQRSYRGPKPSTNLVADWVSNNDDTVRSLPIYVGGISLLIVL 81

Query: 229 FNCTVCAV 252
           FN  V  +
Sbjct: 82  FNRAVSGI 89


>ref|XP_002520192.1| conserved hypothetical protein [Ricinus communis]
           gi|223540684|gb|EEF42247.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 336

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
 Frame = +1

Query: 25  IPLSLKKRHYFH-------PTLHTSIPLSIKADFQKSYKGPKPKKEWIADWVTKNDDTVR 183
           +P S+  R  FH         L   +  S   + Q  Y+GPKPK++ +ADWV+ NDDTVR
Sbjct: 47  LPTSILFRSPFHFPISRPLQNLRFFVRASSDLNSQGKYRGPKPKRDLVADWVSNNDDTVR 106

Query: 184 SLPIYVGGFSLLAVLFN 234
           SLPIYVGG SLLAVLFN
Sbjct: 107 SLPIYVGGASLLAVLFN 123


>dbj|BAD44313.1| hypothetical protein [Arabidopsis thaliana]
           gi|51971329|dbj|BAD44329.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 242

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/75 (53%), Positives = 50/75 (66%), Gaps = 6/75 (8%)
 Frame = +1

Query: 46  RHYFHPTLHTSIPLSIKADFQ------KSYKGPKPKKEWIADWVTKNDDTVRSLPIYVGG 207
           R + HP L    P  I+A         K+Y+GPKP+K  +AD+++KNDD VRSLPIYVGG
Sbjct: 18  RQFSHPPL--DFPRFIRASSSSTSQKPKTYEGPKPRKNLVADFISKNDDLVRSLPIYVGG 75

Query: 208 FSLLAVLFNCTVCAV 252
            SLLAVLFN TV  +
Sbjct: 76  ASLLAVLFNRTVSGI 90


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