BLASTX nr result
ID: Coptis25_contig00015303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015303
(1956 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera... 843 0.0
ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera... 840 0.0
ref|XP_002528338.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransfe... 839 0.0
ref|XP_004169939.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN... 835 0.0
ref|XP_003525222.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) a... 826 0.0
>ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
chloroplastic/mitochondrial-like [Cucumis sativus]
Length = 555
Score = 843 bits (2179), Expect = 0.0
Identities = 415/512 (81%), Positives = 465/512 (90%), Gaps = 8/512 (1%)
Frame = +2
Query: 107 QTQQPKPSNPNHKKPTNSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICP 286
+ Q+P +P+ K K+ +YE++IGIETHVQLST TKAFCSCPY YGS PN+NICP
Sbjct: 44 EKQRPMAISPHFDKQIIDKISKDYEAVIGIETHVQLSTLTKAFCSCPYNYGSSPNTNICP 103
Query: 287 ICMGLPGALPVFNSKVIEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPI 466
ICMGLPGALPV NSKVIE AVKLGLALNC LS NSKFDRKQYFYPDLPKGYQISQFDVPI
Sbjct: 104 ICMGLPGALPVLNSKVIESAVKLGLALNCSLSFNSKFDRKQYFYPDLPKGYQISQFDVPI 163
Query: 467 ASNGFVDLDLPVEFGGGHRRFGITRVHIEEDAGKLLHSDTGTYSQ--------VDLNRAG 622
AS G++DLDLP+E+GGGHRRFGITRVH+EEDAGKLLHS++G+YSQ VDLNRAG
Sbjct: 164 ASGGYIDLDLPIEYGGGHRRFGITRVHMEEDAGKLLHSESGSYSQEMTFYFFQVDLNRAG 223
Query: 623 VPLLEIVSEPDMRTGLEAAEYASEIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAKF 802
VPLLEIVSEPDMRTG+EAAEYA+E+QR+VR+L VSNGNMQEGSLRCDVNVSVRPIGQ++F
Sbjct: 224 VPLLEIVSEPDMRTGIEAAEYAAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSQF 283
Query: 803 GTKVEIKNMNSFSAMHRAIDFEISRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEG 982
GTKVEIKN+NSFS++ RAIDFEISRQVLLHSQGQ DQIVQETRLWEEGAQKT+TMRKKEG
Sbjct: 284 GTKVEIKNLNSFSSVSRAIDFEISRQVLLHSQGQSDQIVQETRLWEEGAQKTITMRKKEG 343
Query: 983 LADYRYFPEPDLPEVVLTTEYIDGIKASLPELPELKRRRYESMGLSMQDVLFLANDISVC 1162
L+DYRYFPEPDLPEV+LT EY++ I SLPELPE+KRRRYESMGLSMQDVLFLANDISV
Sbjct: 344 LSDYRYFPEPDLPEVILTKEYVENIHDSLPELPEMKRRRYESMGLSMQDVLFLANDISVA 403
Query: 1163 RFFDAAVAKGADVKMAANWIMGDIAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISGK 1342
FFDA +A+GA+VK+AANWIMGDIAAY+ NEKL+I++IKLTP+EL+ELIASI+GG ISGK
Sbjct: 404 EFFDATIARGAEVKLAANWIMGDIAAYMKNEKLTINDIKLTPQELAELIASIKGGTISGK 463
Query: 1343 IGKEILFELISKGGTVKGLIEEKDLVQIVDPNEIERMVEKVLADNPKQLEQYRGGKTKLQ 1522
IGKEILFEL++KGGTVKGLI++KDLVQI DP EIE+MVEKVLA+NPKQLEQYRGGKTKLQ
Sbjct: 464 IGKEILFELLAKGGTVKGLIKDKDLVQIADPAEIEKMVEKVLAENPKQLEQYRGGKTKLQ 523
Query: 1523 GFFTGQVMKVSKGKANPVLLNKILSEKLNANS 1618
GFF GQVMK SKGKANP LLNKIL EKLNA S
Sbjct: 524 GFFAGQVMKASKGKANPGLLNKILLEKLNAQS 555
>ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
chloroplastic/mitochondrial-like [Vitis vinifera]
Length = 556
Score = 840 bits (2170), Expect = 0.0
Identities = 428/556 (76%), Positives = 469/556 (84%), Gaps = 17/556 (3%)
Frame = +2
Query: 2 MASICFKAIQTRPFFXXXXXXXXXXXXXXXXXXXX-QTQQPKPSN--------PNHKKPT 154
MASI F+ +Q RPF QT P N P K
Sbjct: 1 MASILFRGVQARPFLLYPSALFGRKSGVLYCTIKGTQTHTAAPENKQPQLKVSPQTKAKV 60
Query: 155 NSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICMGLPGALPVFNSKV 334
K+ +YE+IIGIETHVQLST TKAFCSCPY YGSQPN+ ICPICMGLPG LPV NSKV
Sbjct: 61 LDKISQDYEAIIGIETHVQLSTLTKAFCSCPYNYGSQPNTCICPICMGLPGTLPVLNSKV 120
Query: 335 IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPIASNGFVDLDLPVEFGG 514
IEFAVK+GLALN KLSLNSKFDRKQYFYPDLPKGYQISQFD+PIAS G+VDLDLPVEFGG
Sbjct: 121 IEFAVKVGLALNSKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDLDLPVEFGG 180
Query: 515 GHRRFGITRVHIEEDAGKLLHSDTGTYSQ--------VDLNRAGVPLLEIVSEPDMRTGL 670
GHRRFGITRVH+EEDAGKLLHS G+YSQ VDLNRAGVPLLEIVSEPDMR+G+
Sbjct: 181 GHRRFGITRVHMEEDAGKLLHSGNGSYSQEITFSLYSVDLNRAGVPLLEIVSEPDMRSGI 240
Query: 671 EAAEYASEIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAKFGTKVEIKNMNSFSAMH 850
EA+EYA+E+QR+VR+L VSNGNMQEGSLRCDVNVSVRPIGQ +FGTKVEIKN+NSFSAM+
Sbjct: 241 EASEYAAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQLEFGTKVEIKNLNSFSAMN 300
Query: 851 RAIDFEISRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVV 1030
RAIDFEISRQV LHSQGQ DQIVQETRLWEEG QKTVTMRKKEGL+DYRYFPEPDLPEV+
Sbjct: 301 RAIDFEISRQVSLHSQGQSDQIVQETRLWEEGGQKTVTMRKKEGLSDYRYFPEPDLPEVI 360
Query: 1031 LTTEYIDGIKASLPELPELKRRRYESMGLSMQDVLFLANDISVCRFFDAAVAKGADVKMA 1210
LT +Y+ I++SLPELPELKRRRYE MGLSMQDVLFLAND++V FFDA + KGADVK+A
Sbjct: 361 LTEDYVGSIRSSLPELPELKRRRYEKMGLSMQDVLFLANDVNVAGFFDATIGKGADVKLA 420
Query: 1211 ANWIMGDIAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISGKIGKEILFELISKGGTV 1390
ANWIMGDIAAY+ NEKLSI+EIKLTP+EL+ELIASI+GG ISGKIGKEILFELI+KGGTV
Sbjct: 421 ANWIMGDIAAYMKNEKLSINEIKLTPQELAELIASIKGGTISGKIGKEILFELIAKGGTV 480
Query: 1391 KGLIEEKDLVQIVDPNEIERMVEKVLADNPKQLEQYRGGKTKLQGFFTGQVMKVSKGKAN 1570
KGLIEEKDLVQIVDP EIE+MV+KVL +N KQLEQYRGGKTKLQG+F GQVMK SKGKAN
Sbjct: 481 KGLIEEKDLVQIVDPAEIEKMVDKVLVENQKQLEQYRGGKTKLQGYFAGQVMKASKGKAN 540
Query: 1571 PVLLNKILSEKLNANS 1618
P LLNKIL EKLNA S
Sbjct: 541 PGLLNKILLEKLNAKS 556
>ref|XP_002528338.1| Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, putative
[Ricinus communis] gi|353558725|sp|B9SQR9.1|GATB_RICCO
RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit
B, chloroplastic/mitochondrial; Short=Glu-AdT subunit B;
Flags: Precursor gi|223532206|gb|EEF34010.1|
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
B, putative [Ricinus communis]
Length = 549
Score = 839 bits (2167), Expect = 0.0
Identities = 426/549 (77%), Positives = 472/549 (85%), Gaps = 10/549 (1%)
Frame = +2
Query: 2 MASICFKAIQTRPF------FXXXXXXXXXXXXXXXXXXXXQTQQPKPS---NPNHKKPT 154
MAS F+ IQT P F Q +Q P +P + +
Sbjct: 1 MASTLFRNIQTHPLLLYPTSFFRRKSSVFYCTVNSTSPTATQEKQQCPRIKVSPQTQSKS 60
Query: 155 NSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICMGLPGALPVFNSKV 334
KL +YE+IIGIETHVQLST TKAFCSCPY YG+QPNS ICP+CMGLPGALPV NSKV
Sbjct: 61 LDKLTKDYETIIGIETHVQLSTLTKAFCSCPYNYGAQPNSTICPVCMGLPGALPVLNSKV 120
Query: 335 IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPIASNGFVDLDLPVEFGG 514
IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFD+PIA++G+VDLDLPVEFGG
Sbjct: 121 IEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIATSGYVDLDLPVEFGG 180
Query: 515 GHRRFGITRVHIEEDAGKLLHSDTGTYSQ-VDLNRAGVPLLEIVSEPDMRTGLEAAEYAS 691
GHRRFGITRVH+EEDAGKLLHS G VDLNRAGVPLLEIVSEPDMR G+EAAEYA+
Sbjct: 181 GHRRFGITRVHMEEDAGKLLHSGGGISGAIVDLNRAGVPLLEIVSEPDMRNGIEAAEYAA 240
Query: 692 EIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAKFGTKVEIKNMNSFSAMHRAIDFEI 871
E+QRVVR+L VSNGNMQEGSLRCDVNVS+RPIGQ++FGTKVEIKN+NSFS+++RAIDFEI
Sbjct: 241 ELQRVVRYLGVSNGNMQEGSLRCDVNVSIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEI 300
Query: 872 SRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVVLTTEYID 1051
SRQVLLHSQGQ D IVQETRLWEEGAQKTVTMRKKEGL+DYRYFPEPDLPEVVLT EY+D
Sbjct: 301 SRQVLLHSQGQSDSIVQETRLWEEGAQKTVTMRKKEGLSDYRYFPEPDLPEVVLTEEYVD 360
Query: 1052 GIKASLPELPELKRRRYESMGLSMQDVLFLANDISVCRFFDAAVAKGADVKMAANWIMGD 1231
I++SLPELPE KRRRYE+MGLSMQDVLFLAND SV FFDA +A+GA VK+AANWIMGD
Sbjct: 361 SIQSSLPELPETKRRRYENMGLSMQDVLFLANDTSVAEFFDATIAQGAQVKLAANWIMGD 420
Query: 1232 IAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISGKIGKEILFELISKGGTVKGLIEEK 1411
IAAY+ NEK+SI+EIKLTP+EL+ELIASI+GG+ISGKIGKEILFELI+KGGTVKGLI+EK
Sbjct: 421 IAAYMKNEKVSINEIKLTPKELAELIASIKGGIISGKIGKEILFELIAKGGTVKGLIKEK 480
Query: 1412 DLVQIVDPNEIERMVEKVLADNPKQLEQYRGGKTKLQGFFTGQVMKVSKGKANPVLLNKI 1591
DLVQIVDP EIE+MV+KVL++NPKQLEQYR GKTKLQGFF GQVMK SKGKANP LLNKI
Sbjct: 481 DLVQIVDPAEIEKMVDKVLSENPKQLEQYRAGKTKLQGFFAGQVMKASKGKANPGLLNKI 540
Query: 1592 LSEKLNANS 1618
L EKLNA S
Sbjct: 541 LQEKLNAKS 549
>ref|XP_004169939.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase
subunit B, chloroplastic/mitochondrial-like [Cucumis
sativus]
Length = 556
Score = 835 bits (2158), Expect = 0.0
Identities = 414/513 (80%), Positives = 464/513 (90%), Gaps = 9/513 (1%)
Frame = +2
Query: 107 QTQQPKPSNPNHKKPTNSKLLTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICP 286
+ Q+P +P+ K K+ +YE++IGIETHVQLST TKAFCSCPY YGS PN+NICP
Sbjct: 44 EKQRPMAISPHFDKQIIDKISKDYEAVIGIETHVQLSTLTKAFCSCPYNYGSSPNTNICP 103
Query: 287 ICMGLPGALPVFNSKVIEFAVKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPI 466
ICMGLPGALPV NSKVIE AVKLGLALNC LS NSKFDRKQYFYPDLPKGYQISQFDVPI
Sbjct: 104 ICMGLPGALPVLNSKVIESAVKLGLALNCSLSFNSKFDRKQYFYPDLPKGYQISQFDVPI 163
Query: 467 ASNGFVDLDLPVEFGGGHRRFGITRVHIEEDAGKLLHSDTGTYSQ--------VDLNRAG 622
AS G++DLDLP+E+GGGHRRFGITRVH+EEDAGKLLHS++G+YSQ VDLNRAG
Sbjct: 164 ASGGYIDLDLPIEYGGGHRRFGITRVHMEEDAGKLLHSESGSYSQEMTFYFFQVDLNRAG 223
Query: 623 VPLLEIVSEPDMRTGLEAAEYASEIQRVVRFLDVSNGNMQEGSLRCDVNVSVRPIGQAKF 802
VPLLEIVSEPDMRTG+EAAEYA+E+QR+VR+L VSNGNMQEGSLRCDVNVSVRPIGQ++F
Sbjct: 224 VPLLEIVSEPDMRTGIEAAEYAAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSQF 283
Query: 803 GTKVEIKNMNSFSAMHRAIDFEISRQVLLHSQGQEDQIVQETRLWEEGAQKTVTMRKKEG 982
GTKVEIKN+NSFS++ RAIDFEISRQVLLHSQGQ DQIVQETRLWEEGAQKT+TMRKKEG
Sbjct: 284 GTKVEIKNLNSFSSVSRAIDFEISRQVLLHSQGQSDQIVQETRLWEEGAQKTITMRKKEG 343
Query: 983 LADYRYFPEPDLPEVVLTTEYIDGIKASLPELPELKRRRYESMGLSMQDVLFLANDISVC 1162
L+DYRYFPEPDLPEV+LT EY++ I SLPELPE+KRRRYESMGLSMQDVLFLANDISV
Sbjct: 344 LSDYRYFPEPDLPEVILTKEYVENIHDSLPELPEMKRRRYESMGLSMQDVLFLANDISVS 403
Query: 1163 -RFFDAAVAKGADVKMAANWIMGDIAAYLNNEKLSIDEIKLTPEELSELIASIRGGVISG 1339
FDA +A+GA+VK+AANWIMGDIAAY+ NEKL+I++IKLTP+EL+ELIASI+GG ISG
Sbjct: 404 GXVFDATIARGAEVKLAANWIMGDIAAYMKNEKLTINDIKLTPQELAELIASIKGGTISG 463
Query: 1340 KIGKEILFELISKGGTVKGLIEEKDLVQIVDPNEIERMVEKVLADNPKQLEQYRGGKTKL 1519
KIGKEILFEL++KGGTVKGLI++KDLVQI DP EIE+MVEKVLA+NPKQLEQYRGGKTKL
Sbjct: 464 KIGKEILFELLAKGGTVKGLIKDKDLVQIADPAEIEKMVEKVLAENPKQLEQYRGGKTKL 523
Query: 1520 QGFFTGQVMKVSKGKANPVLLNKILSEKLNANS 1618
QGFF GQVMK SKGKANP LLNKIL EKLNA S
Sbjct: 524 QGFFAGQVMKASKGKANPGLLNKILLEKLNAQS 556
>ref|XP_003525222.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
B-like [Glycine max]
Length = 544
Score = 826 bits (2133), Expect = 0.0
Identities = 408/544 (75%), Positives = 467/544 (85%), Gaps = 5/544 (0%)
Frame = +2
Query: 2 MASICFKAIQTRPFFXXXXXXXXXXXXXXXXXXXX-----QTQQPKPSNPNHKKPTNSKL 166
MAS F+++Q PF TQQ K + + + K+
Sbjct: 1 MASTIFRSLQVHPFLLYPTTFLRRRNEVFHLASKATQSQTDTQQTKVTTSSTQSKKLDKI 60
Query: 167 LTNYESIIGIETHVQLSTQTKAFCSCPYTYGSQPNSNICPICMGLPGALPVFNSKVIEFA 346
+YE+IIGIETHVQLST TKAFC CPY+YGS PNS+ICPICMGLPGALPV NSK+I+FA
Sbjct: 61 PKDYEAIIGIETHVQLSTLTKAFCGCPYSYGSPPNSSICPICMGLPGALPVLNSKIIDFA 120
Query: 347 VKLGLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDVPIASNGFVDLDLPVEFGGGHRR 526
VKLGLALNC L+ NSKFDRKQYFYPDLPKGYQISQFDVPIA+ GF+D+D+PVEFGGGH+R
Sbjct: 121 VKLGLALNCNLAFNSKFDRKQYFYPDLPKGYQISQFDVPIATAGFLDVDIPVEFGGGHKR 180
Query: 527 FGITRVHIEEDAGKLLHSDTGTYSQVDLNRAGVPLLEIVSEPDMRTGLEAAEYASEIQRV 706
FGITRVH+EEDAGKLLH++ G YSQVDLNRAGVPLLEIVSEPDMR G+EAAEYA+E+QR+
Sbjct: 181 FGITRVHMEEDAGKLLHAENGNYSQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRL 240
Query: 707 VRFLDVSNGNMQEGSLRCDVNVSVRPIGQAKFGTKVEIKNMNSFSAMHRAIDFEISRQVL 886
VR+L VSNGNMQEGSLRCDVNVS+RPIGQ+KFGTKVEIKN+NSFS++ RAIDFEISRQV
Sbjct: 241 VRYLGVSNGNMQEGSLRCDVNVSIRPIGQSKFGTKVEIKNLNSFSSVSRAIDFEISRQVQ 300
Query: 887 LHSQGQEDQIVQETRLWEEGAQKTVTMRKKEGLADYRYFPEPDLPEVVLTTEYIDGIKAS 1066
LHSQG+EDQIVQETRLWEEG+Q+T+TMRKKEGLADYRYFPEPDLP V+L+ EY+DGIK S
Sbjct: 301 LHSQGREDQIVQETRLWEEGSQRTITMRKKEGLADYRYFPEPDLPAVILSQEYVDGIKNS 360
Query: 1067 LPELPELKRRRYESMGLSMQDVLFLANDISVCRFFDAAVAKGADVKMAANWIMGDIAAYL 1246
LPELPE+KRRRYE MGLSMQDVLFLAND ++ FFDA +AKGAD K+ ANWIM DIAA++
Sbjct: 361 LPELPEIKRRRYEQMGLSMQDVLFLANDKNIADFFDATLAKGADPKLVANWIMSDIAAFM 420
Query: 1247 NNEKLSIDEIKLTPEELSELIASIRGGVISGKIGKEILFELISKGGTVKGLIEEKDLVQI 1426
NEKL+I+EIKLTPEELSELIASI+GG IS KIGKEILFEL++KGGTVK LIE+KDLVQI
Sbjct: 421 KNEKLTINEIKLTPEELSELIASIKGGTISSKIGKEILFELLAKGGTVKELIEKKDLVQI 480
Query: 1427 VDPNEIERMVEKVLADNPKQLEQYRGGKTKLQGFFTGQVMKVSKGKANPVLLNKILSEKL 1606
DP EIE+MV+K++ADNPKQ+EQYRGGKTKLQGFF GQVMK+SKGKANP LLNKIL EKL
Sbjct: 481 ADPVEIEKMVDKIIADNPKQVEQYRGGKTKLQGFFAGQVMKLSKGKANPGLLNKILLEKL 540
Query: 1607 NANS 1618
N+ S
Sbjct: 541 NSKS 544