BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015301
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40869.1| transcriptional factor MYB-4 [Coptis japonica]        384   e-104
ref|XP_002283785.1| PREDICTED: uncharacterized protein LOC100241...   365   1e-98
ref|XP_004141664.1| PREDICTED: uncharacterized protein LOC101214...   363   4e-98
ref|XP_002515966.1| DNA binding protein, putative [Ricinus commu...   362   9e-98
gb|ABK96220.1| unknown [Populus trichocarpa x Populus deltoides]      358   1e-96

>dbj|BAJ40869.1| transcriptional factor MYB-4 [Coptis japonica]
          Length = 221

 Score =  384 bits (987), Expect = e-104
 Identities = 193/216 (89%), Positives = 193/216 (89%), Gaps = 9/216 (4%)
 Frame = -3

Query: 1192 MTRRCSHCSNNGHNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSS---- 1025
            MTRRCSHCSNNGHNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSS    
Sbjct: 1    MTRRCSHCSNNGHNSRTCPTIKGVKLFGVRLTDGAGLMKKSASMGNLSLYCGASSSGAAS 60

Query: 1024 PSQNSPF-----DLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRXXXXXX 860
            PS NSP      DLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHR      
Sbjct: 61   PSHNSPCSDTLRDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRLFLLGL 120

Query: 859  XXXXXGDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQP 680
                 GDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQP
Sbjct: 121  QKLGKGDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSIDPQP 180

Query: 679  VPEEPLANGVSQVVESVDTNPLPTLCLSLDGECEPM 572
            VPEEPLANGVSQVVES DTNPLPTLCLSLDGECEPM
Sbjct: 181  VPEEPLANGVSQVVESEDTNPLPTLCLSLDGECEPM 216


>ref|XP_002283785.1| PREDICTED: uncharacterized protein LOC100241227 [Vitis vinifera]
            gi|297743200|emb|CBI36067.3| unnamed protein product
            [Vitis vinifera]
          Length = 358

 Score =  365 bits (938), Expect = 1e-98
 Identities = 205/360 (56%), Positives = 246/360 (68%), Gaps = 21/360 (5%)
 Frame = -3

Query: 1192 MTRRCSHCSNNGHNSRTCPT---------IKGVKLFGVRLTDGAGLMKKSASMGNLSLY- 1043
            MTRRCSHCS NGHNSRTCP+         I GVKLFGVRLTDG+ ++KKSASMG+LS   
Sbjct: 1    MTRRCSHCSTNGHNSRTCPSRGGGAVAGGIGGVKLFGVRLTDGS-IIKKSASMGSLSSAH 59

Query: 1042 ----CGASSSPSQNSPF-DLGHSSIN--DGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEE 884
                  A++SP+ +SP  D    +I+  DGY+SDDP   +CSS N RG+RKKG PWTEEE
Sbjct: 60   YHSSSSAAASPNPSSPSSDPLRDAIHEPDGYLSDDPGQATCSS-NRRGERKKGVPWTEEE 118

Query: 883  HRXXXXXXXXXXXGDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVP 704
            HR           GDWRGI+RN+VISRTPTQVASHAQKYFIRQ+N+TRRKRRSSLFDMVP
Sbjct: 119  HRLFLFGLQRLGKGDWRGISRNYVISRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVP 178

Query: 703  DMSIDPQPVPEEPLANGVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPTETEE--- 533
            DM  D  PVPEE      SQ  E+ + + +P+L LSL+ E EPME+ S     E EE   
Sbjct: 179  DMVTDTPPVPEEQFLVPTSQTGETDNASSVPSLNLSLNMEFEPMETISQETVKEAEEAEE 238

Query: 532  -FMPCSDSTPIIPAFLPTYLPLSFPFWPPNIVPAVEEKGMEISHHQVLKPTPILSRDPVN 356
              +P S+  P++PAF P YLP+ FPFWPPN   A EEK  E S HQVLKP P+L ++PVN
Sbjct: 239  TVIPRSELPPVVPAFFPGYLPVPFPFWPPNAASAEEEKESE-SSHQVLKPIPVLPKEPVN 297

Query: 355  VDELVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQSAFHANQPVNRSNLSKRDGNAIPA 176
            VDELVGMS+L+LG      I+ SPLSL L+G+ +RQSAFH N  V  S L K   + + A
Sbjct: 298  VDELVGMSQLSLGEINNGHIDSSPLSLKLLGAPSRQSAFHTNTSVGGSELGKGKNSVVQA 357


>ref|XP_004141664.1| PREDICTED: uncharacterized protein LOC101214316 [Cucumis sativus]
            gi|449480623|ref|XP_004155948.1| PREDICTED:
            uncharacterized protein LOC101229963 [Cucumis sativus]
          Length = 346

 Score =  363 bits (933), Expect = 4e-98
 Identities = 201/351 (57%), Positives = 244/351 (69%), Gaps = 14/351 (3%)
 Frame = -3

Query: 1192 MTRRCSHCSNNGHNSRTCPTIKG--------VKLFGVRLTDGAGLMKKSASMGNLSLYCG 1037
            MTRRCSHCSNNGHNSRTCP+  G        VKLFGVRLTDG+  +KKSASMGNLS++  
Sbjct: 1    MTRRCSHCSNNGHNSRTCPSRAGGGGGSGAGVKLFGVRLTDGS-FIKKSASMGNLSVHYH 59

Query: 1036 ASSS----PSQNSP-FDLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGTPWTEEEHRXX 872
            +SSS    P+ +SP  D  H S  DG++SDDPAH SCS+ N R +RKKG PWTEEEHR  
Sbjct: 60   SSSSAAASPNPDSPNSDPVHDS--DGFLSDDPAHASCSA-NRRAERKKGVPWTEEEHRLF 116

Query: 871  XXXXXXXXXGDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVPDMSI 692
                     GDWRGI+RNFVI+RTPTQVASHAQKYFIRQ+N+TRRKRRSSLFDMVP+M+ 
Sbjct: 117  LVGLQKLGKGDWRGISRNFVITRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMVPEMAT 176

Query: 691  DPQPVPEEPLANGVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPTETE-EFMPCSD 515
            DP PVPE+ + +  SQ  E+ ++N  P+L LSL+ E   ME+T      E     M  + 
Sbjct: 177  DPLPVPEDEILH-ASQTKETENSNSQPSLNLSLNSEFHMMETTVEENGKELHVPKMEVAG 235

Query: 514  STPIIPAFLPTYLPLSFPFWPPNIVPAVEEKGMEISHHQVLKPTPILSRDPVNVDELVGM 335
              P+IP F+P Y+P+ FP W P+  P  EE  +E  HH+VLKP P++  +PVNVDELVGM
Sbjct: 236  FPPVIPGFIPAYMPVPFPIWAPSSFPMEEENVVETCHHEVLKPIPVVPTEPVNVDELVGM 295

Query: 334  SKLTLGAAATDCIEPSPLSLNLIGSSARQSAFHANQPVNRSNLSKRDGNAI 182
            S+LTL     +  EPSPLSL LIG  +RQSAFH N PV+RS L K D + I
Sbjct: 296  SQLTLREYERERREPSPLSLKLIGERSRQSAFHPNAPVSRSELIKDDTDTI 346


>ref|XP_002515966.1| DNA binding protein, putative [Ricinus communis]
            gi|223544871|gb|EEF46386.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 381

 Score =  362 bits (930), Expect = 9e-98
 Identities = 208/384 (54%), Positives = 249/384 (64%), Gaps = 45/384 (11%)
 Frame = -3

Query: 1192 MTRRCSHCSNNGHNSRTCPT--------------------IKGVKLFGVRLTDGAGLMKK 1073
            MTRRCSHCSNNGHNSRTCPT                    I GV+LFGVRLTDG+ ++KK
Sbjct: 1    MTRRCSHCSNNGHNSRTCPTRSSTCSSAAGSGSASSSASSIAGVRLFGVRLTDGS-IIKK 59

Query: 1072 SASMGNLSLY--CGASSSPSQNSPF-DLGHSSINDGYVSDDPAHTSCSSSNCRGDRKKGT 902
            SASMGNLS +    A++SP+ +SP  D    S+ DGY+SDDPAH SCS+ N RG+RKKG 
Sbjct: 60   SASMGNLSAHYHSSAAASPNPDSPLSDHVRDSVQDGYLSDDPAHASCST-NRRGERKKGV 118

Query: 901  PWTEEEHRXXXXXXXXXXXGDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSS 722
            PWTEEEHR           GDWRGIARN+V+SRTPTQVASHAQKYFIRQTN+TRRKRRSS
Sbjct: 119  PWTEEEHRLFLIGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKYFIRQTNATRRKRRSS 178

Query: 721  LFDMVPDMSIDPQPVPEE-PLANGVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPT 545
            LFDMVPDM+ +PQ VPEE  L +G  Q+ ++ + + LP+L LS   ECEPME+ S     
Sbjct: 179  LFDMVPDMATEPQSVPEEHELPSG--QLGDTDNADALPSLNLSFKPECEPMETASEEPAE 236

Query: 544  ETE-----------------EFMPC----SDSTPIIPAFLPTYLPLSFPFWPPNIVPAVE 428
            E E                 EF P     S+ TP I  F P Y+P+ +PFW  N     E
Sbjct: 237  EPEEMLTGSSELKQTEHRLSEFAPAVPQLSEFTPFISGFYPAYMPIPYPFWSTNTAIPEE 296

Query: 427  EKGMEISHHQVLKPTPILSRDPVNVDELVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQ 248
               +E S+HQVLKP PI  ++PVNVDELVGMS L++G    D  E S LSL LIG  +RQ
Sbjct: 297  ANTVETSNHQVLKPVPIFPKEPVNVDELVGMSHLSIGEMERDHRELSRLSLKLIGEPSRQ 356

Query: 247  SAFHANQPVNRSNLSKRDGNAIPA 176
            SAFHAN  V+ S+LS+  G+ I A
Sbjct: 357  SAFHANASVSGSDLSQGKGSPIQA 380


>gb|ABK96220.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 369

 Score =  358 bits (920), Expect = 1e-96
 Identities = 205/367 (55%), Positives = 245/367 (66%), Gaps = 37/367 (10%)
 Frame = -3

Query: 1192 MTRRCSHCSNNGHNSRTCPT-----------IKGVKLFGVRLTDGAGLMKKSASMGNLSL 1046
            MTRRCSHCSNNGHNSRTCPT           + GVKLFGVRLTDG+ ++KKSASMGNLS 
Sbjct: 1    MTRRCSHCSNNGHNSRTCPTRSSLASSSSSPLSGVKLFGVRLTDGS-IIKKSASMGNLSA 59

Query: 1045 YCGASSS----PSQNSPF-DLGHSSINDGYVSDDPA-HTSCSSSNCRGDRKKGTPWTEEE 884
            +  +SSS    P+ +SP  D  H   +DGY+SDDPA H SCS+S  RGDRKKG PWTEEE
Sbjct: 60   HYHSSSSAAASPNPDSPVSDRVH---DDGYLSDDPAAHASCSTSR-RGDRKKGVPWTEEE 115

Query: 883  HRXXXXXXXXXXXGDWRGIARNFVISRTPTQVASHAQKYFIRQTNSTRRKRRSSLFDMVP 704
            HR           GDWRGIARNFV+SRTPTQVASHAQK+FIRQ+N+TRRKRRSSLFDMVP
Sbjct: 116  HRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKFFIRQSNATRRKRRSSLFDMVP 175

Query: 703  DMSIDPQPVPEEPLANGVSQVVESVDTNPLPTLCLSLDGECEPMESTSHNIPTETE---- 536
            +M+ DPQPVPEE      SQ  +  + + LP+L LSL  E EPM++ S  +  E +    
Sbjct: 176  EMATDPQPVPEEQELPS-SQAGDDDNVDALPSLNLSLKPEFEPMDTESQELVKERDKTVM 234

Query: 535  ---EFMP----CSDSTPI---------IPAFLPTYLPLSFPFWPPNIVPAVEEKGMEISH 404
               EF P     S+  PI         +P F P Y+P+ +P+W PN  P  E KG   SH
Sbjct: 235  GFSEFKPSVPSSSEFVPIVSGSNEFTAVPGFFPAYMPVPYPYWAPNTTPFEEGKGAATSH 294

Query: 403  HQVLKPTPILSRDPVNVDELVGMSKLTLGAAATDCIEPSPLSLNLIGSSARQSAFHANQP 224
            H+VLKP P + ++P NVDELVGMS L+LG       EPSPLSL LIG + RQSAFHA+ P
Sbjct: 295  HEVLKPVPSILKEPFNVDELVGMSHLSLGEIERRHREPSPLSLKLIGEAPRQSAFHASAP 354

Query: 223  VNRSNLS 203
             + S+LS
Sbjct: 355  ASGSDLS 361