BLASTX nr result

ID: Coptis25_contig00015298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015298
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589310.1| Protein TRANSPARENT TESTA [Medicago truncatu...    91   8e-36
ref|XP_003628949.1| Protein TRANSPARENT TESTA [Medicago truncatu...    91   2e-35
ref|XP_004135268.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    93   3e-35
ref|XP_004171488.1| PREDICTED: protein TRANSPARENT TESTA 12-like...    93   3e-35
ref|XP_002281913.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vit...    88   7e-35

>ref|XP_003589310.1| Protein TRANSPARENT TESTA [Medicago truncatula]
           gi|355478358|gb|AES59561.1| Protein TRANSPARENT TESTA
           [Medicago truncatula]
          Length = 473

 Score = 90.5 bits (223), Expect(2) = 8e-36
 Identities = 41/61 (67%), Positives = 52/61 (85%)
 Frame = +3

Query: 3   GAGRLNMMGIYMQRSWIILIFTGLVLTVVYIFASPILKLLGQSAEISELAGKFAIWMIPQ 182
           GAG + MMGIYMQRSWIIL+ TGL+L   YI+A+P+LKL+GQ+ EI+E AG FA+WMIPQ
Sbjct: 107 GAGHIRMMGIYMQRSWIILVATGLLLLPFYIWATPLLKLVGQTDEIAEAAGTFALWMIPQ 166

Query: 183 L 185
           +
Sbjct: 167 I 167



 Score = 85.1 bits (209), Expect(2) = 8e-36
 Identities = 40/54 (74%), Positives = 44/54 (81%)
 Frame = +1

Query: 244 IWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLVFHVFLSWVFIQKLEMG 405
           +WMIPQ+FAYALNFPIQKFLQAQ KV+VM WISL  LV HV LSW+ I KL  G
Sbjct: 161 LWMIPQIFAYALNFPIQKFLQAQRKVLVMLWISLGVLVLHVPLSWLLILKLNWG 214


>ref|XP_003628949.1| Protein TRANSPARENT TESTA [Medicago truncatula]
           gi|355522971|gb|AET03425.1| Protein TRANSPARENT TESTA
           [Medicago truncatula]
          Length = 512

 Score = 90.5 bits (223), Expect(2) = 2e-35
 Identities = 41/61 (67%), Positives = 52/61 (85%)
 Frame = +3

Query: 3   GAGRLNMMGIYMQRSWIILIFTGLVLTVVYIFASPILKLLGQSAEISELAGKFAIWMIPQ 182
           GAG+L+M+GIYMQRSW+IL  T ++L  +YIFASP+LKL+GQ+  ISE AG FA+WMIPQ
Sbjct: 122 GAGKLDMLGIYMQRSWLILNATAIILCFLYIFASPLLKLIGQTTAISEAAGVFALWMIPQ 181

Query: 183 L 185
           L
Sbjct: 182 L 182



 Score = 83.6 bits (205), Expect(2) = 2e-35
 Identities = 38/54 (70%), Positives = 43/54 (79%)
 Frame = +1

Query: 244 IWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLVFHVFLSWVFIQKLEMG 405
           +WMIPQLFAYA+NFPIQKFLQAQSK+M MAWIS A+LV H F SW  +  L  G
Sbjct: 176 LWMIPQLFAYAMNFPIQKFLQAQSKIMAMAWISAAALVGHTFFSWFLMLHLGWG 229


>ref|XP_004135268.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Cucumis sativus]
          Length = 504

 Score = 93.2 bits (230), Expect(2) = 3e-35
 Identities = 41/61 (67%), Positives = 54/61 (88%)
 Frame = +3

Query: 3   GAGRLNMMGIYMQRSWIILIFTGLVLTVVYIFASPILKLLGQSAEISELAGKFAIWMIPQ 182
           GAG+L MMG+Y+QRSW+IL+ T +VLT +YIF++P+LKL+GQ+AEISE AG  +IWMIPQ
Sbjct: 126 GAGQLGMMGVYLQRSWVILLTTAVVLTPIYIFSAPLLKLIGQTAEISEAAGVLSIWMIPQ 185

Query: 183 L 185
           L
Sbjct: 186 L 186



 Score = 80.5 bits (197), Expect(2) = 3e-35
 Identities = 36/54 (66%), Positives = 44/54 (81%)
 Frame = +1

Query: 244 IWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLVFHVFLSWVFIQKLEMG 405
           IWMIPQL+AYALNFP+ KFLQAQSK+M M+ IS  +LVFH F +W+F+ KL  G
Sbjct: 180 IWMIPQLYAYALNFPVSKFLQAQSKMMAMSVISAVALVFHTFFTWLFMLKLGWG 233


>ref|XP_004171488.1| PREDICTED: protein TRANSPARENT TESTA 12-like, partial [Cucumis
           sativus]
          Length = 290

 Score = 93.2 bits (230), Expect(2) = 3e-35
 Identities = 41/61 (67%), Positives = 54/61 (88%)
 Frame = +3

Query: 3   GAGRLNMMGIYMQRSWIILIFTGLVLTVVYIFASPILKLLGQSAEISELAGKFAIWMIPQ 182
           GAG+L MMG+Y+QRSW+IL+ T +VLT +YIF++P+LKL+GQ+AEISE AG  +IWMIPQ
Sbjct: 126 GAGQLGMMGVYLQRSWVILLTTAVVLTPIYIFSAPLLKLIGQTAEISEAAGVLSIWMIPQ 185

Query: 183 L 185
           L
Sbjct: 186 L 186



 Score = 80.5 bits (197), Expect(2) = 3e-35
 Identities = 36/54 (66%), Positives = 44/54 (81%)
 Frame = +1

Query: 244 IWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLVFHVFLSWVFIQKLEMG 405
           IWMIPQL+AYALNFP+ KFLQAQSK+M M+ IS  +LVFH F +W+F+ KL  G
Sbjct: 180 IWMIPQLYAYALNFPVSKFLQAQSKMMAMSVISAVALVFHTFFTWLFMLKLGWG 233


>ref|XP_002281913.1| PREDICTED: protein TRANSPARENT TESTA 12 [Vitis vinifera]
           gi|302142423|emb|CBI19626.3| unnamed protein product
           [Vitis vinifera]
          Length = 479

 Score = 87.8 bits (216), Expect(2) = 7e-35
 Identities = 37/61 (60%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   GAGRLNMMGIYMQRSWIILIFTGLVLTVVYIFASPILKLLGQSAEISELAGKFAIWMIPQ 182
           GAG++ M+GIYMQRSW+IL+ T   L  +Y+FA PIL+L+G++ +ISE AG+FA+WMIPQ
Sbjct: 100 GAGKIRMLGIYMQRSWVILLTTACCLVPIYVFAPPILELIGETTQISEAAGQFALWMIPQ 159

Query: 183 L 185
           L
Sbjct: 160 L 160



 Score = 84.7 bits (208), Expect(2) = 7e-35
 Identities = 40/54 (74%), Positives = 43/54 (79%)
 Frame = +1

Query: 244 IWMIPQLFAYALNFPIQKFLQAQSKVMVMAWISLASLVFHVFLSWVFIQKLEMG 405
           +WMIPQLFAYALNFPIQKFLQAQ KV VMAWIS+  LV H  LSW+ I KL  G
Sbjct: 154 LWMIPQLFAYALNFPIQKFLQAQRKVFVMAWISVVVLVIHAVLSWLLILKLGYG 207


Top