BLASTX nr result

ID: Coptis25_contig00015294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015294
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003592181.1| Membrane protein, putative [Medicago truncat...    79   4e-13
ref|XP_002278630.1| PREDICTED: SPX domain-containing membrane pr...    78   8e-13
emb|CAN82243.1| hypothetical protein VITISV_018247 [Vitis vinifera]    78   8e-13

>ref|XP_002304461.1| predicted protein [Populus trichocarpa] gi|222841893|gb|EEE79440.1|
           predicted protein [Populus trichocarpa]
          Length = 698

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/44 (86%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   VADGTITLAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 134
           VADGTITLAGYLG S++LNVTLLPSL ICVASI+ATCFTYN+LY
Sbjct: 655 VADGTITLAGYLGESKLLNVTLLPSLVICVASIVATCFTYNSLY 698


>ref|XP_002298073.1| predicted protein [Populus trichocarpa] gi|222845331|gb|EEE82878.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/44 (84%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   VADGTITLAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 134
           VADGTITLAGYLG S++LNVTLLPSL IC+ASI+ATCFTYN+LY
Sbjct: 451 VADGTITLAGYLGESKLLNVTLLPSLVICIASIVATCFTYNSLY 494


>ref|XP_003592181.1| Membrane protein, putative [Medicago truncatula]
           gi|355481229|gb|AES62432.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 697

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/44 (79%), Positives = 42/44 (95%)
 Frame = +3

Query: 3   VADGTITLAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 134
           +AD TITLAGYLGVSR+LN+TLLPSLFIC+ SI+ATC+TYN+LY
Sbjct: 654 IADATITLAGYLGVSRLLNITLLPSLFICIFSIIATCYTYNSLY 697


>ref|XP_002278630.1| PREDICTED: SPX domain-containing membrane protein At4g22990 [Vitis
           vinifera] gi|296089137|emb|CBI38840.3| unnamed protein
           product [Vitis vinifera]
          Length = 696

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +3

Query: 3   VADGTITLAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 134
           VADGTITLAGYLG   VLNVTLL SLFIC++SI+ATCFTYNTLY
Sbjct: 653 VADGTITLAGYLGEGMVLNVTLLTSLFICISSIVATCFTYNTLY 696


>emb|CAN82243.1| hypothetical protein VITISV_018247 [Vitis vinifera]
          Length = 741

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +3

Query: 3   VADGTITLAGYLGVSRVLNVTLLPSLFICVASIMATCFTYNTLY 134
           VADGTITLAGYLG   VLNVTLL SLFIC++SI+ATCFTYNTLY
Sbjct: 698 VADGTITLAGYLGEGMVLNVTLLTSLFICISSIIATCFTYNTLY 741


Top