BLASTX nr result

ID: Coptis25_contig00015292 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015292
         (1847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244...   459   e-127
ref|XP_002526559.1| transcription factor, putative [Ricinus comm...   416   e-113
ref|XP_003554298.1| PREDICTED: uncharacterized protein LOC100810...   379   e-102
emb|CBI37172.3| unnamed protein product [Vitis vinifera]              374   e-101
ref|XP_003625354.1| Two-component response regulator ARR [Medica...   371   e-100

>ref|XP_002270511.1| PREDICTED: uncharacterized protein LOC100244545 [Vitis vinifera]
          Length = 517

 Score =  459 bits (1182), Expect = e-127
 Identities = 266/507 (52%), Positives = 329/507 (64%), Gaps = 18/507 (3%)
 Frame = -3

Query: 1842 SVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADPVALHSTPSAYN 1663
            S +KQ  ++G SG +SSSL VLPT LEE +PKL  SQ+V   RE+   P A+H++P   N
Sbjct: 12   SGSKQLNNLGASGALSSSLSVLPTSLEETHPKLPDSQQVYVGREIMTRPQAMHASPLPSN 71

Query: 1662 GGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLTHSSQSGIVQCT 1483
             G VGH+ SS+SG+STDLH SS S HER+   +PFISQSS +  S PL HSS SG +Q T
Sbjct: 72   SGAVGHIFSSSSGYSTDLHFSSVSPHERHSRSAPFISQSSSNGTSLPLAHSSHSGQLQST 131

Query: 1482 SSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNES--SDHAIPTEDHXXXXXXXXXX 1309
            +SS++ +ENNN SW + +     DF  N P Q+SQ ES  +   I +ED           
Sbjct: 132  ASSHYIEENNNASWCTDSLSGFLDFPVNTPVQSSQIESRSASGVIASEDLSKRHDWQEWA 191

Query: 1308 XQLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISVRQPQNHQQLSV-SEELC 1132
             QLITD+D    +WNE LVDT++ D  PKMA+Q PK SS  S  QPQ H QLS  S E+ 
Sbjct: 192  DQLITDDDALNSNWNEFLVDTNVADVEPKMAYQVPKPSSNFSANQPQVHPQLSAPSGEVH 251

Query: 1131 AVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKLMNVKGLTIYHV 952
             V  P SS++ +  KPRMRWTPELHE FV+AV+QLGGSERATPKGVLKLM V+GLTIYHV
Sbjct: 252  NVVTPSSSVNTAPTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHV 311

Query: 951  KSHLQKYRTARYRPXXXXXXXXXXXSAAEEMSSVHSKTGIEISEALRLQMEVQKRLHEQL 772
            KSHLQKYRTARYRP           ++ EEMSS+  KTGIEI+EALRLQMEVQKRLHEQL
Sbjct: 312  KSHLQKYRTARYRPESSEGSSEKRLTSIEEMSSLDLKTGIEITEALRLQMEVQKRLHEQL 371

Query: 771  EIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQQLPSTKTEA 592
            EIQRNLQLRIEEQG+ LQM+FE+QCK+  DKLKTS+   E+PSSL+ +     P+ K+E 
Sbjct: 372  EIQRNLQLRIEEQGRYLQMMFEKQCKSGIDKLKTSSSALENPSSLSSDTIPNSPA-KSEM 430

Query: 591  EVVEKDHDTEHGTVDVKDKANENSS--------TCTEKQKTLASEVIEV-------FEPD 457
            E    +HD + GT  V D    + +           E +  L SE I +        E D
Sbjct: 431  EASHDEHD-KTGTDLVNDSKTSSGNPQKLSREQNAIETEALLGSEQIAIEPEAPRNVEQD 489

Query: 456  VDEGSDAPPKKRAKTDDTASPSAKLGS 376
                S++ P KRAK D+++  S K  S
Sbjct: 490  AACESNSQPSKRAKVDESSISSVKSAS 516


>ref|XP_002526559.1| transcription factor, putative [Ricinus communis]
            gi|223534120|gb|EEF35837.1| transcription factor,
            putative [Ricinus communis]
          Length = 491

 Score =  416 bits (1069), Expect = e-113
 Identities = 249/483 (51%), Positives = 304/483 (62%), Gaps = 4/483 (0%)
 Frame = -3

Query: 1845 RSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADPVALHSTPSAY 1666
            RS  KQ  ++GVSG +SSS PVLPT  EE YPKLS +Q+V  ++ L   P+ +H+     
Sbjct: 11   RSGVKQLSNLGVSGALSSSYPVLPTSREETYPKLSDAQQVAMEKGLMTRPL-VHTNHLPS 69

Query: 1665 NGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLTHSSQSGIVQC 1486
            N GVVGHL SS++GFSTDL  SS S  E++   +PFISQS  + A+  L  S  SG++QC
Sbjct: 70   NNGVVGHLFSSSAGFSTDLQYSSVSPQEKHSRNTPFISQSPTNVAALTLPQSPHSGLLQC 129

Query: 1485 TSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNESSD--HAIPTEDHXXXXXXXXX 1312
            T+SS + KEN+  SW   +     DF  N   QN+Q ES+    AI +E+          
Sbjct: 130  TASSQYDKENS-ASWCPESLPGFLDFPVNSHVQNNQIESNSCTGAITSEEFSKRNDWQEW 188

Query: 1311 XXQLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISVRQPQNHQQLSV-SEEL 1135
              QLITD+D    +WN+LLVD    +  PKMA+Q  K  S IS  QPQ HQQL   S ++
Sbjct: 189  ADQLITDDDALTSNWNDLLVDNSAPEMEPKMAYQVSKPPSDISAHQPQVHQQLPAPSIDI 248

Query: 1134 CAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKLMNVKGLTIYH 955
              V  P SS++ +  KPRMRWTPELHE FV AV+QLGGSERATPKGVLKLM V+GLTIYH
Sbjct: 249  RPVLTPTSSVNTAPSKPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYH 308

Query: 954  VKSHLQKYRTARYRPXXXXXXXXXXXSAAEEMSSVHSKTGIEISEALRLQMEVQKRLHEQ 775
            VKSHLQKYRTARYRP           +  EE+SS+  KTGIEI+EALRLQMEVQKRLHEQ
Sbjct: 309  VKSHLQKYRTARYRPDSLEGSSEQKLTPLEEISSLDLKTGIEITEALRLQMEVQKRLHEQ 368

Query: 774  LEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQQLPSTKTE 595
            LEIQRNLQLRIEEQG+ LQM+FE+QCK+  D LK S+   E+PSS          S K E
Sbjct: 369  LEIQRNLQLRIEEQGRYLQMMFEKQCKSGTDVLKASSSAVENPSSALSSDAVHDSSGKNE 428

Query: 594  AEVVEKDH-DTEHGTVDVKDKANENSSTCTEKQKTLASEVIEVFEPDVDEGSDAPPKKRA 418
             E  + DH +    T D K K  E S    EK+K L  E     EPD  E S++   KR 
Sbjct: 429  MEASKVDHGNAITNTDDTKSKLEERSQDPNEKKKALQIEASGNPEPDNGE-SNSQSAKRP 487

Query: 417  KTD 409
            + D
Sbjct: 488  RLD 490


>ref|XP_003554298.1| PREDICTED: uncharacterized protein LOC100810560 [Glycine max]
          Length = 484

 Score =  379 bits (973), Expect = e-102
 Identities = 242/489 (49%), Positives = 305/489 (62%), Gaps = 9/489 (1%)
 Frame = -3

Query: 1845 RSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADPVALHSTPSAY 1666
            RS  KQ  +MG+S    SSLP LP+PLEE YPKLS S+ V  ++EL   P   HS+    
Sbjct: 11   RSNAKQLNNMGMSEAFPSSLPALPSPLEETYPKLSDSKPVFMEKELKTKPYT-HSSHLT- 68

Query: 1665 NGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLTHSSQSGIVQC 1486
            + G VGH+ SS+ G+STDLH SS S+HE+    + FISQS  + AS PL++SS S  +  
Sbjct: 69   SSGAVGHMFSSSPGYSTDLHHSSFSSHEKQPRNTHFISQSLSNMASLPLSYSSNSEPIPS 128

Query: 1485 TSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNESSD-HAIPTEDHXXXXXXXXXX 1309
            T+S+ +    N+VSW + +  S  DF  N    NSQ ESSD + + TE++          
Sbjct: 129  TTSTPYSN-GNSVSWHTDSLPSFLDFPANTSIGNSQVESSDCNIMATEEYSKRNDWQEWA 187

Query: 1308 XQLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISV-RQPQNHQQLSVS--EE 1138
             QLI+D D    +WN+LL D +I D  PK+A    K SS++ +  Q Q+HQQL  S  E 
Sbjct: 188  DQLISDVDPLTSNWNDLLAD-NIQDLEPKVA----KSSSQLPIGHQSQSHQQLPASSGEN 242

Query: 1137 LCAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKLMNVKGLTIY 958
               VA P SS + +  KPRMRWTPELHE FV+AV+QLGGSERATPKGVLKLM V GLTIY
Sbjct: 243  RVGVA-PTSSTNSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVDGLTIY 301

Query: 957  HVKSHLQKYRTARYRPXXXXXXXXXXXSAAEEMSSVHSKTGIEISEALRLQMEVQKRLHE 778
            HVKSHLQKYRTARYRP           S  EEMSS+  KTGIEI+EALRLQMEVQKRLHE
Sbjct: 302  HVKSHLQKYRTARYRPESSEGAAEKKLSPIEEMSSLDLKTGIEITEALRLQMEVQKRLHE 361

Query: 777  QLEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQQLPSTKT 598
            QLEIQRNLQLRIEEQG+ LQM+FE+QCK   +  K S+   E  S ++ +  +  P+ KT
Sbjct: 362  QLEIQRNLQLRIEEQGRYLQMMFEKQCKPGIETFKASSSAIESQSGVSSDAIKDSPA-KT 420

Query: 597  EAEVVEKDH-----DTEHGTVDVKDKANENSSTCTEKQKTLASEVIEVFEPDVDEGSDAP 433
            E+E ++ DH     D  +G   V++ A E      EKQ    S+  E  E    E S A 
Sbjct: 421  ESETIKVDHCKSGADQANGITTVEESALE----VGEKQDAPESQASENPEQHASEDS-AK 475

Query: 432  PKKRAKTDD 406
              KR +T++
Sbjct: 476  ASKRPRTEE 484


>emb|CBI37172.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  374 bits (959), Expect = e-101
 Identities = 224/456 (49%), Positives = 279/456 (61%), Gaps = 18/456 (3%)
 Frame = -3

Query: 1689 LHSTPSAYNGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLTHS 1510
            +H++P   N G VGH+ SS+SG+STDLH SS S HER+  +                   
Sbjct: 1    MHASPLPSNSGAVGHIFSSSSGYSTDLHFSSVSPHERHSRRQ------------------ 42

Query: 1509 SQSGIVQCTSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNES--SDHAIPTEDHX 1336
                 +Q T+SS++ +ENNN SW + +     DF  N P Q+SQ ES  +   I +ED  
Sbjct: 43   -----LQSTASSHYIEENNNASWCTDSLSGFLDFPVNTPVQSSQIESRSASGVIASEDLS 97

Query: 1335 XXXXXXXXXXQLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISVRQPQNHQQ 1156
                      QLITD+D    +WNE LVDT++ D  PKMA+Q PK SS  S  QPQ H Q
Sbjct: 98   KRHDWQEWADQLITDDDALNSNWNEFLVDTNVADVEPKMAYQVPKPSSNFSANQPQVHPQ 157

Query: 1155 LSV-SEELCAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKLMN 979
            LS  S E+  V  P SS++ +  KPRMRWTPELHE FV+AV+QLGGSERATPKGVLKLM 
Sbjct: 158  LSAPSGEVHNVVTPSSSVNTAPTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMK 217

Query: 978  VKGLTIYHVKSHLQKYRTARYRPXXXXXXXXXXXSAAEEMSSVHSKTGIEISEALRLQME 799
            V+GLTIYHVKSHLQKYRTARYRP           ++ EEMSS+  KTGIEI+EALRLQME
Sbjct: 218  VEGLTIYHVKSHLQKYRTARYRPESSEGSSEKRLTSIEEMSSLDLKTGIEITEALRLQME 277

Query: 798  VQKRLHEQLEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQ 619
            VQKRLHEQLEIQRNLQLRIEEQG+ LQM+FE+QCK+  DKLKTS+   E+PSSL+ +   
Sbjct: 278  VQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGIDKLKTSSSALENPSSLSSDTIP 337

Query: 618  QLPSTKTEAEVVEKDHDTEHGTVDVKDKANENSS--------TCTEKQKTLASEVIEV-- 469
              P+ K+E E    +HD + GT  V D    + +           E +  L SE I +  
Sbjct: 338  NSPA-KSEMEASHDEHD-KTGTDLVNDSKTSSGNPQKLSREQNAIETEALLGSEQIAIEP 395

Query: 468  -----FEPDVDEGSDAPPKKRAKTDDTASPSAKLGS 376
                  E D    S++ P KRAK D+++  S K  S
Sbjct: 396  EAPRNVEQDAACESNSQPSKRAKVDESSISSVKSAS 431


>ref|XP_003625354.1| Two-component response regulator ARR [Medicago truncatula]
            gi|355500369|gb|AES81572.1| Two-component response
            regulator ARR [Medicago truncatula]
          Length = 489

 Score =  371 bits (953), Expect = e-100
 Identities = 226/489 (46%), Positives = 302/489 (61%), Gaps = 9/489 (1%)
 Frame = -3

Query: 1845 RSVTKQARSMGVSGFMSSSLPVLPTPLEEKYPKLSHSQKVCFDRELTADPVALHSTPSAY 1666
            RS ++Q  ++G+SG + SSL V PTPLEE YP+ S SQ    +++L       + +    
Sbjct: 11   RSSSQQLNNIGMSGALPSSLSVHPTPLEETYPRFSDSQPTYVEKDLKTK--TFNHSSHIS 68

Query: 1665 NGGVVGHLLSSTSGFSTDLHSSSASTHERYLTKSPFISQSSQDCASYPLTHSSQSGIVQC 1486
            + G VGH+ SS+ G+STDLH SS S HE++   + FISQS  + AS PL +SS +G V  
Sbjct: 69   SSGAVGHMFSSSPGYSTDLHHSSLSPHEKHSRSAHFISQSLSNMASVPLPYSSNNGPVPS 128

Query: 1485 TSSSNFGKENNNVSWSSVTPQSVHDFNGNIPDQNSQNESSD-HAIPTEDHXXXXXXXXXX 1309
            T+S+++    N+ SW +    S  DF+ N    N+Q ES   + + TE+           
Sbjct: 129  TTSTHYSN-GNSASWHADPLPSFLDFSANASIDNNQVESGACNIMATEEFSKRNDWQEWA 187

Query: 1308 XQLITDEDTSPPDWNELLVDTHIVDTLPKMAHQTPKRSSKISV-RQPQNHQQL-SVSEEL 1135
             QLI+D+DT   +WN+LL D +I D  PK      K SS+     Q Q+HQQL ++S E 
Sbjct: 188  DQLISDDDTLTSNWNDLLAD-NIQDLEPKAVESISKSSSQFPAGHQSQDHQQLPALSGEN 246

Query: 1134 CAVACPLSSISGSSIKPRMRWTPELHECFVQAVSQLGGSERATPKGVLKLMNVKGLTIYH 955
                 P SS + ++ KPRMRWTPELHE FV+AV+QLGGSERATPKGVLKLM V+GLTIYH
Sbjct: 247  HVGVAPSSSANSATTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYH 306

Query: 954  VKSHLQKYRTARYRPXXXXXXXXXXXSAAEEMSSVHSKTGIEISEALRLQMEVQKRLHEQ 775
            VKSHLQKYRTARYRP           S  E++SS+  KTGIEI+EALRLQMEVQKRLHEQ
Sbjct: 307  VKSHLQKYRTARYRPESSEGAGEKKLSPIEDISSLDLKTGIEITEALRLQMEVQKRLHEQ 366

Query: 774  LEIQRNLQLRIEEQGKVLQMIFEQQCKAADDKLKTSTLIREDPSSLNLEPTQQLPSTKTE 595
            LEIQRNLQLRIEEQG+ LQM+FE+QCK+  +  K S+   E+PS ++ +  +  P TK E
Sbjct: 367  LEIQRNLQLRIEEQGRYLQMMFEKQCKSGVEPFKASSSAIENPSGVSSDTMKDSP-TKNE 425

Query: 594  AEVVEKDH-----DTEHGTVDVKDKANENSSTCTEKQKTLASEVIEVFEPDVDEGSDAP- 433
             E  + DH     D  +G+  V++ + E        +   AS+ +E      +E  D+P 
Sbjct: 426  LEASKMDHCKSGPDQANGSTTVEESSLEAVEKLDTSKSQQASKDLE-----QNENEDSPQ 480

Query: 432  PKKRAKTDD 406
              KR +TD+
Sbjct: 481  APKRQRTDE 489


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