BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015291
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...   119   1e-24
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]         114   3e-23
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   110   4e-22
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   110   5e-22
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   110   5e-22

>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score =  119 bits (298), Expect = 1e-24
 Identities = 62/200 (31%), Positives = 106/200 (53%)
 Frame = -1

Query: 632 SSSVYTLNWKTLCRPKINGGLGFRNTKTMNNALLGKQCWRLLTDQTSLWARTFRAICHKW 453
           S  ++ ++W+ L  PK  G +GF+N K +N A++GKQ W+L+T   SL  +  +A   K+
Sbjct: 8   SKGIHWMSWERLSTPKSFGSMGFKNLKALNMAMIGKQAWKLVTSPNSLITKLLKA---KY 64

Query: 452 WPGGGGSVLNPSQHASYFWKGITKTFDLIEPGILWSIKSGNKVSVCNEPWVCLNNQPILL 273
           +P       + S + SY W+G+ +  D++     WSI +G  +SV ++ W  L N   L 
Sbjct: 65  YPRSDYFGASVSHNPSYVWRGLWRVKDMVRRSFQWSIGTGESISVWHQLW--LGNHEQLT 122

Query: 272 KDHIINPHFNRDTKVTGIINNTRTGWNEYFLEFLFPRPIVEAITAIPIRPSEQQDTLIWR 93
               ++  ++ + +V  ++      WN+ F+ ++F     E I   P+ PS QQD   WR
Sbjct: 123 PVTELHSMWS-ELRVANLLQVNAKQWNKSFINYVFDTGTAEQIYKTPLLPSVQQDIATWR 181

Query: 92  CNPKGNYTVRTAYKLLSQNN 33
               GNY++R+AY  +  NN
Sbjct: 182 FEKDGNYSIRSAYCDILNNN 201


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score =  114 bits (285), Expect = 3e-23
 Identities = 74/208 (35%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
 Frame = -1

Query: 659 LERLECT------EESSSVYTLNWKTLCRPKINGGLGFRNTKTMNNALLGKQCWRLLTDQ 498
           +E++ C          S ++  +W+ LCR K NGGLGFR  K  N A+L KQ WRLLT  
Sbjct: 58  IEKMMCNFYWGGDRNGSKMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLP 117

Query: 497 TSLWARTFRAICHKWWPGGGGSVLNPSQHASYFWKGITKTFDLIEPGILWSIKSGNKVSV 318
            SL A   RA   K++P      ++ S ++SY W+ I K   L++ GI W I  GN V  
Sbjct: 118 NSLAATILRA---KYYPRKSPLEISSSPYSSYTWRSILKGSQLLQKGIEWRIGQGNTVRT 174

Query: 317 CNEPWVCLNNQPILLKDHIINPHFNRDTKVTGIINNTRTGWNEYFLEFLFPRPIVEAITA 138
            ++PW+   +   L K H  +P  +  T V+  I N   GWNE  L   F    V  I  
Sbjct: 175 WSDPWI-PGSDTGLPKYH--SPGSDLYTHVSDFIQN--GGWNENLLRLCFEEEDVTRILQ 229

Query: 137 IPIRPSEQQDTLIWRCNPKGNYTVRTAY 54
           I +      D + W+    G YTVR+ Y
Sbjct: 230 IRLSLRRPLDMVRWKFIKDGEYTVRSGY 257


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  110 bits (276), Expect = 4e-22
 Identities = 65/195 (33%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
 Frame = -1

Query: 635  ESSSVYTLNWKTLCRPKINGGLGFRNTKTMNNALLGKQCWRLLTDQTSLWARTFRAICHK 456
            +S  ++ + W  LC  K +GGLGFRN    N+ALL KQ WRL+T   SL+A+ F+    +
Sbjct: 616  DSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKG---R 672

Query: 455  WWPGGGGSVLNPSQHASYFWKGITKTFDLIEPGILWSIKSGNKVSVCNEPWVCLN-NQPI 279
            ++          S   SY W+ +     L+  G++  + SG  +SV N+PW+     +P 
Sbjct: 673  YFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPWIPAQFPRPA 732

Query: 278  LLKDHIINPHFNRDTKVTGIINNTRTGWNEYFLEFLFPRPIVEAITAIPIRPSEQQDTLI 99
                 I++P      KV  +I++    WN   L+ LF    V  I+A+PI     +DTL 
Sbjct: 733  KYGGSIVDP----SLKVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLG 788

Query: 98   WRCNPKGNYTVRTAY 54
            W     GNYTV++ Y
Sbjct: 789  WHFTKAGNYTVKSGY 803


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  110 bits (275), Expect = 5e-22
 Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
 Frame = -1

Query: 638  EESSSVYTLNWKTLCRPKINGGLGFRNTKTMNNALLGKQCWRLLTDQTSLWARTFRAICH 459
            E+ + ++ L+W  L  PK  GGLGFR+    N A+L KQ WRL+ D  SL +R  RA   
Sbjct: 1087 EKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRA--- 1143

Query: 458  KWWPGGGGSVLNPSQHASYFWKGITKTFDLIEPGILWSIKSGNKVSVCNEPWV--CLNNQ 285
            K++P G       + + SY W+ I K   +++ G++W +  G+K+++  +PW+    + +
Sbjct: 1144 KYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRK 1203

Query: 284  PILLKDHIINPHFNRDTKVTGIINNTRTGWNEYFLEFLFPRPIVEAITAIPIRPSEQQDT 105
            P+  +        N  TKV  +I+     W+E  L   F    V AI +IP+   E +D 
Sbjct: 1204 PMTPRG------ANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDV 1256

Query: 104  LIWRCNPKGNYTVRTAYKLLSQ-------------NNWECSSSNF 9
            L W  + +G +TV++AYK+  +             +NWE    +F
Sbjct: 1257 LAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDF 1301


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  110 bits (275), Expect = 5e-22
 Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
 Frame = -1

Query: 638  EESSSVYTLNWKTLCRPKINGGLGFRNTKTMNNALLGKQCWRLLTDQTSLWARTFRAICH 459
            E+ + ++ L+W  L  PK  GGLGFR+    N A+L KQ WRL+ D  SL +R  RA   
Sbjct: 1032 EKDNKMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRA--- 1088

Query: 458  KWWPGGGGSVLNPSQHASYFWKGITKTFDLIEPGILWSIKSGNKVSVCNEPWV--CLNNQ 285
            K++P G       + + SY W+ I K   +++ G++W +  G+K+++  +PW+    + +
Sbjct: 1089 KYFPLGDCFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRK 1148

Query: 284  PILLKDHIINPHFNRDTKVTGIINNTRTGWNEYFLEFLFPRPIVEAITAIPIRPSEQQDT 105
            P+  +        N  TKV  +I+     W+E  L   F    V AI +IP+   E +D 
Sbjct: 1149 PMTPRG------ANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEMEDV 1201

Query: 104  LIWRCNPKGNYTVRTAYKLLSQ-------------NNWECSSSNF 9
            L W  + +G +TV++AYK+  +             +NWE    +F
Sbjct: 1202 LAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDF 1246