BLASTX nr result

ID: Coptis25_contig00015287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015287
         (675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267265.1| PREDICTED: uncharacterized protein LOC100245...    72   1e-10
ref|XP_002532215.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_003544279.1| PREDICTED: uncharacterized protein LOC100809...    68   2e-09
ref|NP_187423.2| uncharacterized protein [Arabidopsis thaliana] ...    65   2e-08
gb|AAF13084.1|AC009176_11 unknown protein [Arabidopsis thaliana]       65   2e-08

>ref|XP_002267265.1| PREDICTED: uncharacterized protein LOC100245992 [Vitis vinifera]
           gi|296085055|emb|CBI28470.3| unnamed protein product
           [Vitis vinifera]
          Length = 896

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 14/81 (17%)
 Frame = +2

Query: 2   GRNSLVLSTAGSTPLATQASGVMQSSLAVMQQPVHVF*QPSRVHVSYCKPNSFSY----- 166
           G NSLVLSTAG+TPL TQ++GVMQSS+AV QQPV VF QP  VH+ +  PN   Y     
Sbjct: 634 GGNSLVLSTAGATPLVTQSAGVMQSSIAVTQQPVPVFRQPG-VHIPHYPPNYIPYGHYFS 692

Query: 167 ---------DQYLTNPAYPQQ 202
                     Q+L N A+P Q
Sbjct: 693 PFYVPPPAIHQFLANGAFPHQ 713


>ref|XP_002532215.1| conserved hypothetical protein [Ricinus communis]
           gi|223528111|gb|EEF30184.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 633

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 14/81 (17%)
 Frame = +2

Query: 2   GRNSLVLSTAGSTPLATQASGVMQSSLAVMQQPVHVF*QPSRVHVSYCKPNSFSY----- 166
           G NSLVLSTAG TPL TQA+G+MQSS+ V QQ + VF  P+ +H+ +  PN   Y     
Sbjct: 370 GGNSLVLSTAGPTPLVTQAAGLMQSSIPVTQQALPVFRPPTGLHIPHYPPNYIPYGHYFS 429

Query: 167 ---------DQYLTNPAYPQQ 202
                     Q+L+N A+PQQ
Sbjct: 430 PFYVPPPGIHQFLSNGAFPQQ 450


>ref|XP_003544279.1| PREDICTED: uncharacterized protein LOC100809372 [Glycine max]
          Length = 878

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 14/76 (18%)
 Frame = +2

Query: 17  VLSTAGSTPLATQASGVMQSSLAVMQQPVHVF*QPSRVHVSYCKPNSFSYD--------- 169
           VLSTAG TPL TQA+G+MQSS+AV QQPV VF +PS VH+S+  PN   Y          
Sbjct: 620 VLSTAGPTPLVTQAAGLMQSSIAVTQQPVPVF-RPSGVHISHYPPNYIPYSPYFSPFYVS 678

Query: 170 -----QYLTNPAYPQQ 202
                Q++ N A+PQQ
Sbjct: 679 PPAIHQFMGNGAFPQQ 694


>ref|NP_187423.2| uncharacterized protein [Arabidopsis thaliana]
           gi|110742276|dbj|BAE99063.1| hypothetical protein
           [Arabidopsis thaliana] gi|332641063|gb|AEE74584.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 841

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 13/80 (16%)
 Frame = +2

Query: 2   GRNSLVLSTAGSTPLATQASGVMQSSLAVMQQPVHVF*QPSRVHVSYCKPNSFSY----- 166
           G N+LVLSTA   PL TQA+G+MQSS+ V QQPV VF +P  +H+S+  PN   Y     
Sbjct: 582 GGNNLVLSTASPPPLVTQAAGLMQSSIPVTQQPVPVF-RPPGLHMSHYPPNYVPYGYFSP 640

Query: 167 --------DQYLTNPAYPQQ 202
                    QYL+N AY QQ
Sbjct: 641 FYLPPPTMHQYLSNGAYAQQ 660


>gb|AAF13084.1|AC009176_11 unknown protein [Arabidopsis thaliana]
          Length = 782

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 13/80 (16%)
 Frame = +2

Query: 2   GRNSLVLSTAGSTPLATQASGVMQSSLAVMQQPVHVF*QPSRVHVSYCKPNSFSY----- 166
           G N+LVLSTA   PL TQA+G+MQSS+ V QQPV VF +P  +H+S+  PN   Y     
Sbjct: 523 GGNNLVLSTASPPPLVTQAAGLMQSSIPVTQQPVPVF-RPPGLHMSHYPPNYVPYGYFSP 581

Query: 167 --------DQYLTNPAYPQQ 202
                    QYL+N AY QQ
Sbjct: 582 FYLPPPTMHQYLSNGAYAQQ 601


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