BLASTX nr result
ID: Coptis25_contig00015278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015278
(2612 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_717161.1| hypothetical protein BrnapMp064 [Brassica napus... 112 5e-33
ref|YP_004927571.1| orf448 (mitochondrion) [Brassica carinata] g... 112 7e-33
ref|XP_003530699.1| PREDICTED: uncharacterized mitochondrial pro... 88 2e-31
ref|NP_085564.1| hypothetical protein ArthMp097 [Arabidopsis tha... 94 2e-27
gb|ABK28172.1| unknown [Arabidopsis thaliana] 94 2e-27
>ref|YP_717161.1| hypothetical protein BrnapMp064 [Brassica napus]
gi|353526385|ref|YP_004927457.1| orf448 (mitochondrion)
[Brassica oleracea] gi|353526703|ref|YP_004927873.1|
orf448 (mitochondrion) [Brassica rapa subsp. campestris]
gi|353531385|ref|YP_004927776.1| orf448 (mitochondrion)
[Brassica juncea] gi|37591108|dbj|BAC98910.1|
hypothetical protein [Brassica napus]
gi|335354891|gb|AEH43447.1| orf448 [Brassica rapa subsp.
campestris] gi|335354930|gb|AEH43485.1| orf448 [Brassica
oleracea] gi|335355118|gb|AEH43671.1| orf448 [Brassica
juncea] gi|339511319|emb|CBX48374.1| unnamed protein
product [Brassica napus]
Length = 448
Score = 112 bits (280), Expect(2) = 5e-33
Identities = 80/226 (35%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Frame = -1
Query: 2366 LASLLYHITLWCGGEKVYPGVR--FTSYGILGDDVVIADRKVAAIYVQTLERLHVGISYG 2193
L +L +H +W + YP F Y +LGDD+VIADR VA Y L+ L V IS
Sbjct: 213 LFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDA 272
Query: 2192 KSLISNTGSAEFAKRLWIRGMSKDVSPCSARAFLNFYNPFGLVALGLKYHCQRFSTLVRI 2013
KS++S TG EFAKR W++ MSKD+SP SA+A L Y G L KY + L
Sbjct: 273 KSIVSETGCLEFAKRFWVKIMSKDLSPVSAKAVLESYFLVGTQQLAYKYKLSPKTCLRLN 332
Query: 2012 XXXXXXXXXXXXKPRSRKIQRLWSMQMKXXXXXXXXXXXXXXGR--PLNPYIYWKLKEMV 1839
K SR+ R+ ++ K GR PL+PY+ L +
Sbjct: 333 KAGYRVLGQMDTKALSRRFSRIQALSSKLLVGPDRLPLEWWIGRGLPLSPYLRGVLIARI 392
Query: 1838 LDQLKPKDLRVPPDELFVT-EKVQILQEYTQLRGWMKEWLAYLRWY 1704
D +K K L PP E+F+ E + E T R WM ++ WY
Sbjct: 393 RDGMKLKQLTPPPLEMFLCGEPEAHIAENTAYRHWMNNGVS--TWY 436
Score = 57.8 bits (138), Expect(2) = 5e-33
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = -2
Query: 2560 TSATDRWRLQVMFEIMQSLFDRSFASS-VRSALALNIFEVPFVRKKKGIFRTVSFVSGQP 2384
++ATDRW + V++E+M LF ++ AS V ALALN + V G V FV+GQP
Sbjct: 148 SAATDRWPVPVIYELMACLFGQTMASCIVNGALALNSCSLKSVT---GRHDEVVFVAGQP 204
Query: 2383 LGYYSSWPLCSIT 2345
LGYY SW L +++
Sbjct: 205 LGYYGSWALFALS 217
>ref|YP_004927571.1| orf448 (mitochondrion) [Brassica carinata]
gi|335355032|gb|AEH43586.1| orf448 [Brassica carinata]
Length = 448
Score = 112 bits (280), Expect(2) = 7e-33
Identities = 80/226 (35%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Frame = -1
Query: 2366 LASLLYHITLWCGGEKVYPGVR--FTSYGILGDDVVIADRKVAAIYVQTLERLHVGISYG 2193
L +L +H +W + YP F Y +LGDD+VIADR VA Y L+ L V IS
Sbjct: 213 LFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDA 272
Query: 2192 KSLISNTGSAEFAKRLWIRGMSKDVSPCSARAFLNFYNPFGLVALGLKYHCQRFSTLVRI 2013
KS++S TG EFAKR W++ MSKD+SP SA+A L Y G L KY + L
Sbjct: 273 KSIVSETGCLEFAKRFWVKIMSKDLSPVSAKAVLESYFLVGTQQLAYKYKLSPKTCLRLN 332
Query: 2012 XXXXXXXXXXXXKPRSRKIQRLWSMQMKXXXXXXXXXXXXXXGR--PLNPYIYWKLKEMV 1839
K SR+ R+ ++ K GR PL+PY+ L +
Sbjct: 333 KAGYRVLGQMDTKALSRRFSRIQALSSKLLVGPDRLPLEWWIGRGLPLSPYLRGVLIARI 392
Query: 1838 LDQLKPKDLRVPPDELFVT-EKVQILQEYTQLRGWMKEWLAYLRWY 1704
D +K K L PP E+F+ E + E T R WM ++ WY
Sbjct: 393 RDGMKLKQLTPPPLEMFLCGEPEAHIAENTAYRHWMNNGVS--TWY 436
Score = 57.4 bits (137), Expect(2) = 7e-33
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = -2
Query: 2560 TSATDRWRLQVMFEIMQSLFDRSFASS-VRSALALNIFEVPFVRKKKGIFRTVSFVSGQP 2384
++ATDRW + V++E+M LF ++ AS V ALALN + V G V F++GQP
Sbjct: 148 SAATDRWPVPVIYELMACLFGQTMASCIVNGALALNSCSLKSVT---GRHDEVVFIAGQP 204
Query: 2383 LGYYSSWPLCSIT 2345
LGYY SW L +++
Sbjct: 205 LGYYGSWALFALS 217
>ref|XP_003530699.1| PREDICTED: uncharacterized mitochondrial protein AtMg01410-like
[Glycine max] gi|403311600|gb|AFR34348.1| hypothetical
protein GlmaxMp34 (mitochondrion) [Glycine max]
Length = 189
Score = 88.2 bits (217), Expect(2) = 2e-31
Identities = 45/99 (45%), Positives = 63/99 (63%)
Frame = -1
Query: 2366 LASLLYHITLWCGGEKVYPGVRFTSYGILGDDVVIADRKVAAIYVQTLERLHVGISYGKS 2187
L + +H+ +W E+V PG+ F Y ILGDDV+I D VA Y L+RL V IS KS
Sbjct: 88 LFAFTHHVLVWWAAEQVRPGILFDRYAILGDDVLITDPLVAEQYRLGLQRLGVKISTHKS 147
Query: 2186 LISNTGSAEFAKRLWIRGMSKDVSPCSARAFLNFYNPFG 2070
LIS+TG+ EFAK+ ++ M ++SP S +A F++P G
Sbjct: 148 LISSTGAVEFAKQFLVKDMRVNLSPVSMKALCGFHHPHG 186
Score = 76.6 bits (187), Expect(2) = 2e-31
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = -2
Query: 2557 SATDRWRLQVMFEIMQSLFDRSFASSV-RSALALNIFEVPFVRKKKGIFRTVSFVSGQPL 2381
SATD W L +FE + LFDRSFASSV + L N+FEVPFV++ VSFV+GQPL
Sbjct: 24 SATDWWPLVFLFERLALLFDRSFASSVVNTTLGTNVFEVPFVKRA---LSQVSFVTGQPL 80
Query: 2380 GYYSSWPLCSIT 2345
GYY WPL + T
Sbjct: 81 GYYGYWPLFAFT 92
>ref|NP_085564.1| hypothetical protein ArthMp097 [Arabidopsis thaliana]
gi|45477062|sp|P92543.1|M1110_ARATH RecName:
Full=Uncharacterized mitochondrial protein AtMg01110;
AltName: Full=ORF251 gi|1785766|emb|CAA69796.1| unnamed
protein product [Arabidopsis thaliana]
Length = 251
Score = 94.0 bits (232), Expect(2) = 2e-27
Identities = 51/109 (46%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = -1
Query: 2366 LASLLYHITLWCGGEKVYPGVR--FTSYGILGDDVVIADRKVAAIYVQTLERLHVGISYG 2193
L +L +H +W + YP F Y +LGDD+VIADR VA Y L+ L V IS
Sbjct: 101 LFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDA 160
Query: 2192 KSLISNTGSAEFAKRLWIRGMSKDVSPCSARAFLNFYNPFGLVALGLKY 2046
KS++S TG EFAKR W++ MSKD+SP SA+A L Y G L KY
Sbjct: 161 KSIVSETGCLEFAKRFWVKIMSKDLSPVSAKAVLESYFLVGTQQLAYKY 209
Score = 57.8 bits (138), Expect(2) = 2e-27
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = -2
Query: 2560 TSATDRWRLQVMFEIMQSLFDRSFASS-VRSALALNIFEVPFVRKKKGIFRTVSFVSGQP 2384
++ATDRW + V++E+M LF ++ AS V ALALN + V G V FV+GQP
Sbjct: 36 SAATDRWPVPVIYELMACLFGQTMASCIVNGALALNSCSLKSVT---GRHDEVVFVAGQP 92
Query: 2383 LGYYSSWPLCSIT 2345
LGYY SW L +++
Sbjct: 93 LGYYGSWALFALS 105
>gb|ABK28172.1| unknown [Arabidopsis thaliana]
Length = 247
Score = 94.0 bits (232), Expect(2) = 2e-27
Identities = 51/109 (46%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Frame = -1
Query: 2366 LASLLYHITLWCGGEKVYPGVR--FTSYGILGDDVVIADRKVAAIYVQTLERLHVGISYG 2193
L +L +H +W + YP F Y +LGDD+VIADR VA Y L+ L V IS
Sbjct: 96 LFALSHHAIVWLAALRAYPHQTRPFLDYALLGDDIVIADRSVAKEYRSLLDALQVDISDA 155
Query: 2192 KSLISNTGSAEFAKRLWIRGMSKDVSPCSARAFLNFYNPFGLVALGLKY 2046
KS++S TG EFAKR W++ MSKD+SP SA+A L Y G L KY
Sbjct: 156 KSIVSETGCLEFAKRFWVKIMSKDLSPVSAKAVLESYFLVGTQQLAYKY 204
Score = 57.8 bits (138), Expect(2) = 2e-27
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = -2
Query: 2560 TSATDRWRLQVMFEIMQSLFDRSFASS-VRSALALNIFEVPFVRKKKGIFRTVSFVSGQP 2384
++ATDRW + V++E+M LF ++ AS V ALALN + V G V FV+GQP
Sbjct: 31 SAATDRWPVPVIYELMACLFGQTMASCIVNGALALNSCSLKSVT---GRHDEVVFVAGQP 87
Query: 2383 LGYYSSWPLCSIT 2345
LGYY SW L +++
Sbjct: 88 LGYYGSWALFALS 100