BLASTX nr result

ID: Coptis25_contig00015277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015277
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523830.1| 40S ribosomal protein S14, putative [Ricinus...   119   9e-50
ref|XP_004147408.1| PREDICTED: 40S ribosomal protein S14-2-like ...   118   2e-49
ref|XP_004147409.1| PREDICTED: 40S ribosomal protein S14-2-like ...   118   2e-49
gb|ACF06620.1| ribosomal protein S14 [Elaeis guineensis]              120   2e-49
gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]     119   2e-49

>ref|XP_002523830.1| 40S ribosomal protein S14, putative [Ricinus communis]
           gi|223536918|gb|EEF38556.1| 40S ribosomal protein S14,
           putative [Ricinus communis]
          Length = 150

 Score =  119 bits (298), Expect(2) = 9e-50
 Identities = 70/107 (65%), Positives = 70/107 (65%)
 Frame = +3

Query: 228 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 407
           GGMKVKADRDESSPYAAMLAAQDV QRCKELGITALHIKLRA            AQSALR
Sbjct: 57  GGMKVKADRDESSPYAAMLAAQDVTQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 116

Query: 408 ALARSGMKIGRXXXXXXXXXXXXXXXXXXXXXIGRIEDVTPIPTDST 548
           ALARSGMK                        IGRIEDVTPIPTDST
Sbjct: 117 ALARSGMK------------------------IGRIEDVTPIPTDST 139



 Score =  104 bits (260), Expect(2) = 9e-50
 Identities = 50/56 (89%), Positives = 52/56 (92%)
 Frame = +2

Query: 2   SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITG 169
           SK+K REPKEE VTLGPA+ EGE VFGVAHIYASFNDTFIHVTDLSGRETMVRITG
Sbjct: 2   SKKKTREPKEENVTLGPAIREGEHVFGVAHIYASFNDTFIHVTDLSGRETMVRITG 57


>ref|XP_004147408.1| PREDICTED: 40S ribosomal protein S14-2-like isoform 1 [Cucumis
           sativus]
          Length = 173

 Score =  118 bits (296), Expect(2) = 2e-49
 Identities = 69/107 (64%), Positives = 71/107 (66%)
 Frame = +3

Query: 228 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 407
           GGMKVKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA            AQSALR
Sbjct: 80  GGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 139

Query: 408 ALARSGMKIGRXXXXXXXXXXXXXXXXXXXXXIGRIEDVTPIPTDST 548
           ALARSGM+                        IGRIEDVTPIPTDST
Sbjct: 140 ALARSGMR------------------------IGRIEDVTPIPTDST 162



 Score =  104 bits (259), Expect(2) = 2e-49
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +2

Query: 2   SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITG 169
           S+RK REPKEETVTLGPAV EGE VFGVAHI+ASFNDTFIHVTDLSGRET+VRITG
Sbjct: 25  SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITG 80


>ref|XP_004147409.1| PREDICTED: 40S ribosomal protein S14-2-like isoform 2 [Cucumis
           sativus]
          Length = 152

 Score =  118 bits (296), Expect(2) = 2e-49
 Identities = 69/107 (64%), Positives = 71/107 (66%)
 Frame = +3

Query: 228 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 407
           GGMKVKADRDESSPYAAMLAAQDV+QRCKELGITALHIKLRA            AQSALR
Sbjct: 59  GGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 118

Query: 408 ALARSGMKIGRXXXXXXXXXXXXXXXXXXXXXIGRIEDVTPIPTDST 548
           ALARSGM+                        IGRIEDVTPIPTDST
Sbjct: 119 ALARSGMR------------------------IGRIEDVTPIPTDST 141



 Score =  104 bits (259), Expect(2) = 2e-49
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +2

Query: 2   SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITG 169
           S+RK REPKEETVTLGPAV EGE VFGVAHI+ASFNDTFIHVTDLSGRET+VRITG
Sbjct: 4   SRRKTREPKEETVTLGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITG 59


>gb|ACF06620.1| ribosomal protein S14 [Elaeis guineensis]
          Length = 150

 Score =  120 bits (302), Expect(2) = 2e-49
 Identities = 71/107 (66%), Positives = 71/107 (66%)
 Frame = +3

Query: 228 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 407
           GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA            AQSALR
Sbjct: 57  GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALR 116

Query: 408 ALARSGMKIGRXXXXXXXXXXXXXXXXXXXXXIGRIEDVTPIPTDST 548
           ALARSGMK                        IGRIEDVTPIPTDST
Sbjct: 117 ALARSGMK------------------------IGRIEDVTPIPTDST 139



 Score =  102 bits (253), Expect(2) = 2e-49
 Identities = 49/56 (87%), Positives = 51/56 (91%)
 Frame = +2

Query: 2   SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITG 169
           S+RK REPKEE VTLGP V EGE VFGVAHI+ASFNDTFIHVTDLSGRETMVRITG
Sbjct: 2   SRRKTREPKEENVTLGPTVREGEHVFGVAHIFASFNDTFIHVTDLSGRETMVRITG 57


>gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]
          Length = 150

 Score =  119 bits (298), Expect(2) = 2e-49
 Identities = 68/107 (63%), Positives = 71/107 (66%)
 Frame = +3

Query: 228 GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRAXXXXXXXXXXXXAQSALR 407
           GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITA+H+KLRA            AQSALR
Sbjct: 57  GGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALR 116

Query: 408 ALARSGMKIGRXXXXXXXXXXXXXXXXXXXXXIGRIEDVTPIPTDST 548
           ALARSGMK                        IGRIEDVTP+PTDST
Sbjct: 117 ALARSGMK------------------------IGRIEDVTPVPTDST 139



 Score =  103 bits (257), Expect(2) = 2e-49
 Identities = 49/56 (87%), Positives = 53/56 (94%)
 Frame = +2

Query: 2   SKRKVREPKEETVTLGPAVGEGEQVFGVAHIYASFNDTFIHVTDLSGRETMVRITG 169
           S+RK REPKEETVTLGPAV +GEQVFGV HI+ASFNDTFIHVTDLSGRET+VRITG
Sbjct: 2   SRRKTREPKEETVTLGPAVRDGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITG 57


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