BLASTX nr result

ID: Coptis25_contig00015259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015259
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305735.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-30
ref|XP_003633015.1| PREDICTED: probable LRR receptor-like serine...    89   2e-22
emb|CBI30706.3| unnamed protein product [Vitis vinifera]               89   2e-22
gb|ACD56664.1| putative leucine-rich repeat transmembrane protei...    84   8e-22
gb|AAT64032.1| putative leucine-rich repeat transmembrane protei...    84   8e-22

>ref|XP_002305735.1| predicted protein [Populus trichocarpa] gi|222848699|gb|EEE86246.1|
           predicted protein [Populus trichocarpa]
          Length = 616

 Score =  110 bits (274), Expect(2) = 3e-30
 Identities = 56/80 (70%), Positives = 60/80 (75%)
 Frame = -1

Query: 241 TLHEEKRLEVLVDRGLNGCFEVEELEKTVELALQCTQSHPNQRPKMSEVVNVLEGIVXXX 62
           TLHEEKRLEVLVDR L GCF+V ELEK V+LALQCTQSHPN RPKMSEV+ VLEGIV   
Sbjct: 514 TLHEEKRLEVLVDRDLKGCFDVSELEKAVDLALQCTQSHPNLRPKMSEVLKVLEGIVGQP 573

Query: 61  XXXXXXXXGSIGEGRACSFS 2
                    SIGE RAC+ S
Sbjct: 574 AIEESQGATSIGEARACNCS 593



 Score = 46.6 bits (109), Expect(2) = 3e-30
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = -3

Query: 302 GQKALDAGNGQIQKGMILDWNIT*GEE 222
           GQKALDAGNGQ+QKGMILDW  T  EE
Sbjct: 492 GQKALDAGNGQVQKGMILDWVRTLHEE 518


>ref|XP_003633015.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At5g45780-like [Vitis vinifera]
          Length = 620

 Score = 89.4 bits (220), Expect(2) = 2e-22
 Identities = 50/84 (59%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
 Frame = -1

Query: 241 TLHEEKRLEVLVDRGLNGCFEVEELEKTVELALQCTQSHPNQRPKMSEVVNVLEGIVXXX 62
           TL EEKRLEVL+DR L GCF+ EELEK V LA  CTQ HPN RPKMSEV+ VLE +V   
Sbjct: 514 TLQEEKRLEVLIDRDLKGCFDTEELEKAVGLAQLCTQPHPNLRPKMSEVLKVLESMVGQS 573

Query: 61  XXXXXXXXGS----IGEGRACSFS 2
                   G      GEGRACS S
Sbjct: 574 GHAEEESQGGGGTLNGEGRACSLS 597



 Score = 41.2 bits (95), Expect(2) = 2e-22
 Identities = 20/27 (74%), Positives = 21/27 (77%)
 Frame = -3

Query: 302 GQKALDAGNGQIQKGMILDWNIT*GEE 222
           G KALDA NGQ+QKGMILDW  T  EE
Sbjct: 492 GPKALDARNGQVQKGMILDWVRTLQEE 518


>emb|CBI30706.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score = 89.4 bits (220), Expect(2) = 2e-22
 Identities = 50/84 (59%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
 Frame = -1

Query: 241 TLHEEKRLEVLVDRGLNGCFEVEELEKTVELALQCTQSHPNQRPKMSEVVNVLEGIVXXX 62
           TL EEKRLEVL+DR L GCF+ EELEK V LA  CTQ HPN RPKMSEV+ VLE +V   
Sbjct: 498 TLQEEKRLEVLIDRDLKGCFDTEELEKAVGLAQLCTQPHPNLRPKMSEVLKVLESMVGQS 557

Query: 61  XXXXXXXXGS----IGEGRACSFS 2
                   G      GEGRACS S
Sbjct: 558 GHAEEESQGGGGTLNGEGRACSLS 581



 Score = 41.2 bits (95), Expect(2) = 2e-22
 Identities = 20/27 (74%), Positives = 21/27 (77%)
 Frame = -3

Query: 302 GQKALDAGNGQIQKGMILDWNIT*GEE 222
           G KALDA NGQ+QKGMILDW  T  EE
Sbjct: 476 GPKALDARNGQVQKGMILDWVRTLQEE 502


>gb|ACD56664.1| putative leucine-rich repeat transmembrane protein [Gossypium
           arboreum]
          Length = 618

 Score = 83.6 bits (205), Expect(2) = 8e-22
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -1

Query: 241 TLHEEKRLEVLVDRGLNGCFEVEELEKTVELALQCTQSHPNQRPKMSEVVNVLEGIV 71
           TLHEE+RLEVLVDR L GCF+  ELE   ELALQCT+  P+ RPKMSEV+ VLEG+V
Sbjct: 517 TLHEERRLEVLVDRDLQGCFDTIELETVTELALQCTRPQPHLRPKMSEVLKVLEGLV 573



 Score = 45.1 bits (105), Expect(2) = 8e-22
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = -3

Query: 302 GQKALDAGNGQIQKGMILDWNIT*GEE 222
           GQK LDAGNGQ+QKGMILDW  T  EE
Sbjct: 495 GQKTLDAGNGQVQKGMILDWVRTLHEE 521


>gb|AAT64032.1| putative leucine-rich repeat transmembrane protein [Gossypium
           hirsutum]
          Length = 618

 Score = 83.6 bits (205), Expect(2) = 8e-22
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = -1

Query: 241 TLHEEKRLEVLVDRGLNGCFEVEELEKTVELALQCTQSHPNQRPKMSEVVNVLEGIV 71
           TLHEE+RLEVLVDR L GCF+  ELE   ELALQCT+  P+ RPKMSEV+ VLEG+V
Sbjct: 517 TLHEERRLEVLVDRDLQGCFDTIELETVTELALQCTRPQPHLRPKMSEVLKVLEGLV 573



 Score = 45.1 bits (105), Expect(2) = 8e-22
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = -3

Query: 302 GQKALDAGNGQIQKGMILDWNIT*GEE 222
           GQK LDAGNGQ+QKGMILDW  T  EE
Sbjct: 495 GQKTLDAGNGQVQKGMILDWVRTLHEE 521


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