BLASTX nr result
ID: Coptis25_contig00015248
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00015248 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-13 emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera] 67 3e-13 emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera] 69 6e-13 emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera] 69 6e-13 gb|AAM18172.1|AC092172_32 Putative activator-like transposable e... 65 6e-13 >ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1| predicted protein [Populus trichocarpa] Length = 662 Score = 80.5 bits (197), Expect = 1e-13 Identities = 33/59 (55%), Positives = 46/59 (77%) Frame = -2 Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1 FSG + PTAN YFPE+ D+H++LI W ++ + +S+MA KMK KFD+YWS C+L LA+A Sbjct: 423 FSGDKCPTANIYFPEICDVHIQLIEWCKNPDDFLSSMASKMKAKFDRYWSKCSLALAVA 481 >emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera] Length = 1368 Score = 67.0 bits (162), Expect(2) = 3e-13 Identities = 31/59 (52%), Positives = 38/59 (64%) Frame = -2 Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1 FSG YPTAN +F +V +I L W N +V TMA M KFDKYWS C++V+AIA Sbjct: 409 FSGRNYPTANTFFIKVCEIKEALYDWLICSNDVVKTMASSMLQKFDKYWSGCHIVMAIA 467 Score = 32.7 bits (73), Expect(2) = 3e-13 Identities = 15/26 (57%), Positives = 18/26 (69%) Frame = -1 Query: 253 PSKEDWVMAKVICDILKNFCDTSNLF 176 PSKE+W MAK IC LK F + + LF Sbjct: 384 PSKEEWNMAKEICGRLKLFYNITELF 409 >emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera] Length = 1266 Score = 68.6 bits (166), Expect(2) = 6e-13 Identities = 32/59 (54%), Positives = 39/59 (66%) Frame = -2 Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1 FSG YPTAN +F +V +I L W N +VSTMA M KFDKYWS C++V+AIA Sbjct: 487 FSGRNYPTANTFFIKVCEIKEALYDWLICSNEVVSTMASSMLEKFDKYWSGCHIVMAIA 545 Score = 30.0 bits (66), Expect(2) = 6e-13 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -1 Query: 253 PSKEDWVMAKVICDILKNFCDTSNLF 176 PS+E+W +A+ IC+ LK F + + LF Sbjct: 462 PSEEEWNLAREICERLKLFYNITKLF 487 >emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera] Length = 1068 Score = 68.6 bits (166), Expect(2) = 6e-13 Identities = 32/59 (54%), Positives = 39/59 (66%) Frame = -2 Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1 FSG YPTAN +F +V +I L W N +VSTMA M KFDKYWS C++V+AIA Sbjct: 459 FSGXNYPTANTFFIKVCEIKEALYDWLICSNEVVSTMASSMLEKFDKYWSGCHIVMAIA 517 Score = 30.0 bits (66), Expect(2) = 6e-13 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -1 Query: 253 PSKEDWVMAKVICDILKNFCDTSNLF 176 PS+E+W +A+ IC+ LK F + + LF Sbjct: 434 PSEEEWNLAREICERLKLFYNITKLF 459 >gb|AAM18172.1|AC092172_32 Putative activator-like transposable element [Oryza sativa Japonica Group] gi|31430915|gb|AAP52767.1| hAT family dimerisation domain containing protein, expressed [Oryza sativa Japonica Group] Length = 737 Score = 64.7 bits (156), Expect(2) = 6e-13 Identities = 25/61 (40%), Positives = 40/61 (65%) Frame = -2 Query: 183 IYFSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAI 4 + FSG+ YPTAN +F + I + + W S N++++TM + MK K+DKYW N+ L++ Sbjct: 445 LIFSGSSYPTANLFFTKFCQIKMAVEDWCHSSNTVIATMGKSMKPKYDKYWEKSNMALSV 504 Query: 3 A 1 A Sbjct: 505 A 505 Score = 33.9 bits (76), Expect(2) = 6e-13 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 256 APSKEDWVMAKVICDILKNFCDTSNLF 176 AP+ +DW MAK +C LK F D + +F Sbjct: 421 APTDDDWTMAKSLCTCLKRFYDATLIF 447