BLASTX nr result

ID: Coptis25_contig00015248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015248
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]    67   3e-13
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]    69   6e-13
emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]    69   6e-13
gb|AAM18172.1|AC092172_32 Putative activator-like transposable e...    65   6e-13

>ref|XP_002331299.1| predicted protein [Populus trichocarpa] gi|222873882|gb|EEF11013.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 33/59 (55%), Positives = 46/59 (77%)
 Frame = -2

Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1
           FSG + PTAN YFPE+ D+H++LI W ++ +  +S+MA KMK KFD+YWS C+L LA+A
Sbjct: 423 FSGDKCPTANIYFPEICDVHIQLIEWCKNPDDFLSSMASKMKAKFDRYWSKCSLALAVA 481


>emb|CAN79118.1| hypothetical protein VITISV_005773 [Vitis vinifera]
          Length = 1368

 Score = 67.0 bits (162), Expect(2) = 3e-13
 Identities = 31/59 (52%), Positives = 38/59 (64%)
 Frame = -2

Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1
           FSG  YPTAN +F +V +I   L  W    N +V TMA  M  KFDKYWS C++V+AIA
Sbjct: 409 FSGRNYPTANTFFIKVCEIKEALYDWLICSNDVVKTMASSMLQKFDKYWSGCHIVMAIA 467



 Score = 32.7 bits (73), Expect(2) = 3e-13
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 253 PSKEDWVMAKVICDILKNFCDTSNLF 176
           PSKE+W MAK IC  LK F + + LF
Sbjct: 384 PSKEEWNMAKEICGRLKLFYNITELF 409


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score = 68.6 bits (166), Expect(2) = 6e-13
 Identities = 32/59 (54%), Positives = 39/59 (66%)
 Frame = -2

Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1
           FSG  YPTAN +F +V +I   L  W    N +VSTMA  M  KFDKYWS C++V+AIA
Sbjct: 487 FSGRNYPTANTFFIKVCEIKEALYDWLICSNEVVSTMASSMLEKFDKYWSGCHIVMAIA 545



 Score = 30.0 bits (66), Expect(2) = 6e-13
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 253 PSKEDWVMAKVICDILKNFCDTSNLF 176
           PS+E+W +A+ IC+ LK F + + LF
Sbjct: 462 PSEEEWNLAREICERLKLFYNITKLF 487


>emb|CAN68697.1| hypothetical protein VITISV_042570 [Vitis vinifera]
          Length = 1068

 Score = 68.6 bits (166), Expect(2) = 6e-13
 Identities = 32/59 (54%), Positives = 39/59 (66%)
 Frame = -2

Query: 177 FSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAIA 1
           FSG  YPTAN +F +V +I   L  W    N +VSTMA  M  KFDKYWS C++V+AIA
Sbjct: 459 FSGXNYPTANTFFIKVCEIKEALYDWLICSNEVVSTMASSMLEKFDKYWSGCHIVMAIA 517



 Score = 30.0 bits (66), Expect(2) = 6e-13
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 253 PSKEDWVMAKVICDILKNFCDTSNLF 176
           PS+E+W +A+ IC+ LK F + + LF
Sbjct: 434 PSEEEWNLAREICERLKLFYNITKLF 459


>gb|AAM18172.1|AC092172_32 Putative activator-like transposable element [Oryza sativa Japonica
           Group] gi|31430915|gb|AAP52767.1| hAT family
           dimerisation domain containing protein, expressed [Oryza
           sativa Japonica Group]
          Length = 737

 Score = 64.7 bits (156), Expect(2) = 6e-13
 Identities = 25/61 (40%), Positives = 40/61 (65%)
 Frame = -2

Query: 183 IYFSGTQYPTANQYFPEVADIHLKLIGWSESDNSIVSTMAEKMKTKFDKYWSVCNLVLAI 4
           + FSG+ YPTAN +F +   I + +  W  S N++++TM + MK K+DKYW   N+ L++
Sbjct: 445 LIFSGSSYPTANLFFTKFCQIKMAVEDWCHSSNTVIATMGKSMKPKYDKYWEKSNMALSV 504

Query: 3   A 1
           A
Sbjct: 505 A 505



 Score = 33.9 bits (76), Expect(2) = 6e-13
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 256 APSKEDWVMAKVICDILKNFCDTSNLF 176
           AP+ +DW MAK +C  LK F D + +F
Sbjct: 421 APTDDDWTMAKSLCTCLKRFYDATLIF 447


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