BLASTX nr result

ID: Coptis25_contig00015238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015238
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534676.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   129   4e-28
ref|XP_002267170.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   128   6e-28
ref|XP_002869840.1| kinase [Arabidopsis lyrata subsp. lyrata] gi...   127   1e-27
ref|NP_193944.2| STRUBBELIG-receptor family 8 protein [Arabidops...   125   4e-27
ref|XP_003546163.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   124   7e-27

>ref|XP_003534676.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Glycine max]
          Length = 706

 Score =  129 bits (323), Expect = 4e-28
 Identities = 66/127 (51%), Positives = 81/127 (63%)
 Frame = -3

Query: 382 LIFSTTDPADFEALQVVYTSLNSPSQLTGWKSSNNRGGGDPCGENWKGIICEGSSIVSIQ 203
           L  +TTDP+D +AL+V+Y  LNSP+QLTGWK     GGGDPCGE+WKG+ CEGS++VSI+
Sbjct: 21  LSLATTDPSDVQALEVMYNVLNSPTQLTGWKI----GGGDPCGESWKGVTCEGSAVVSIK 76

Query: 202 VSGLGLSGTMGYTXXXXXXXXXXXXXDNEIHDTIPYQXXXXXXXXXXXXXXXXXXXPYSL 23
           +SGLGL GT+GY              DN+IHDTIPYQ                   PYS+
Sbjct: 77  LSGLGLDGTLGYLLSDLMSLRDLDLSDNKIHDTIPYQLPPNLTSLNFARNNLSGNLPYSI 136

Query: 22  SVMGSLN 2
           S MGSLN
Sbjct: 137 SAMGSLN 143


>ref|XP_002267170.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Vitis
           vinifera] gi|297741762|emb|CBI32991.3| unnamed protein
           product [Vitis vinifera]
          Length = 729

 Score =  128 bits (321), Expect = 6e-28
 Identities = 65/129 (50%), Positives = 79/129 (61%)
 Frame = -3

Query: 388 PCLIFSTTDPADFEALQVVYTSLNSPSQLTGWKSSNNRGGGDPCGENWKGIICEGSSIVS 209
           P  ++  TDP+D + LQV+Y SLN PSQLTGW +S+    GDPCGE+WKG+ CEGS++VS
Sbjct: 34  PLSVYGATDPSDVQGLQVIYNSLNGPSQLTGWTNSS----GDPCGESWKGVTCEGSAVVS 89

Query: 208 IQVSGLGLSGTMGYTXXXXXXXXXXXXXDNEIHDTIPYQXXXXXXXXXXXXXXXXXXXPY 29
           IQ+SGLGL+GTMGY              DN IHDTIPYQ                   PY
Sbjct: 90  IQISGLGLNGTMGYLLSNFLSLRTLDMSDNNIHDTIPYQLPPNLTNLNLASNNLTGSFPY 149

Query: 28  SLSVMGSLN 2
           S+S M SLN
Sbjct: 150 SISTMVSLN 158


>ref|XP_002869840.1| kinase [Arabidopsis lyrata subsp. lyrata]
           gi|297315676|gb|EFH46099.1| kinase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 703

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/127 (50%), Positives = 79/127 (62%)
 Frame = -3

Query: 382 LIFSTTDPADFEALQVVYTSLNSPSQLTGWKSSNNRGGGDPCGENWKGIICEGSSIVSIQ 203
           ++   TDP+D +ALQV+YTSLNSPSQLT WK+    GGGDPCGE+WKGI CEGS++VSI 
Sbjct: 24  IVSCVTDPSDVQALQVLYTSLNSPSQLTNWKN----GGGDPCGESWKGITCEGSAVVSID 79

Query: 202 VSGLGLSGTMGYTXXXXXXXXXXXXXDNEIHDTIPYQXXXXXXXXXXXXXXXXXXXPYSL 23
           +S LG+SGT+GY               N IHDT+PYQ                   PYS+
Sbjct: 80  ISDLGVSGTLGYLLSDLMSLRKLDVSGNSIHDTLPYQLPPNLTSLNLARNNLSGNLPYSI 139

Query: 22  SVMGSLN 2
           S MGSL+
Sbjct: 140 SAMGSLS 146


>ref|NP_193944.2| STRUBBELIG-receptor family 8 protein [Arabidopsis thaliana]
           gi|75127758|sp|Q6R2J8.1|SRF8_ARATH RecName: Full=Protein
           STRUBBELIG-RECEPTOR FAMILY 8; AltName: Full=Leucine-rich
           repeat receptor kinase-like protein SRF8; Flags:
           Precursor gi|41323415|gb|AAR99876.1| strubbelig receptor
           family 8 [Arabidopsis thaliana]
           gi|224589624|gb|ACN59345.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332659160|gb|AEE84560.1| STRUBBELIG-receptor family 8
           protein [Arabidopsis thaliana]
          Length = 703

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/122 (51%), Positives = 77/122 (63%)
 Frame = -3

Query: 367 TDPADFEALQVVYTSLNSPSQLTGWKSSNNRGGGDPCGENWKGIICEGSSIVSIQVSGLG 188
           TDP+D +ALQV+YTSLNSPSQLT WK+    GGGDPCGE+WKGI CEGS++V+I +S LG
Sbjct: 29  TDPSDVQALQVLYTSLNSPSQLTNWKN----GGGDPCGESWKGITCEGSAVVTIDISDLG 84

Query: 187 LSGTMGYTXXXXXXXXXXXXXDNEIHDTIPYQXXXXXXXXXXXXXXXXXXXPYSLSVMGS 8
           +SGT+GY               N IHDT+PYQ                   PYS+S MGS
Sbjct: 85  VSGTLGYLLSDLKSLRKLDVSGNSIHDTLPYQLPPNLTSLNLARNNLSGNLPYSISAMGS 144

Query: 7   LN 2
           L+
Sbjct: 145 LS 146


>ref|XP_003546163.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Glycine max]
          Length = 705

 Score =  124 bits (312), Expect = 7e-27
 Identities = 64/127 (50%), Positives = 80/127 (62%)
 Frame = -3

Query: 382 LIFSTTDPADFEALQVVYTSLNSPSQLTGWKSSNNRGGGDPCGENWKGIICEGSSIVSIQ 203
           L  + TDP+D +AL+V+Y +LNSP+QLTGWK     GGGDPCGE+WKG+ CEGS++VSI+
Sbjct: 21  LSLANTDPSDVQALEVMYNALNSPTQLTGWKI----GGGDPCGESWKGVTCEGSAVVSIK 76

Query: 202 VSGLGLSGTMGYTXXXXXXXXXXXXXDNEIHDTIPYQXXXXXXXXXXXXXXXXXXXPYSL 23
           +SGLGL GT+GY              DN+IHDTIPYQ                   PYS+
Sbjct: 77  LSGLGLDGTLGYLLSDLMSLRELDLSDNKIHDTIPYQLPPNLTSLNFARNNLSGNLPYSI 136

Query: 22  SVMGSLN 2
           S M SLN
Sbjct: 137 SAMVSLN 143


Top