BLASTX nr result
ID: Coptis25_contig00015236
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00015236
(1316 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containin... 179 1e-42
emb|CBI17411.3| unnamed protein product [Vitis vinifera] 179 1e-42
emb|CBI37995.3| unnamed protein product [Vitis vinifera] 168 3e-39
ref|XP_002313011.1| predicted protein [Populus trichocarpa] gi|2... 168 3e-39
ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815... 165 2e-38
>ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like [Vitis
vinifera]
Length = 1643
Score = 179 bits (455), Expect = 1e-42
Identities = 122/302 (40%), Positives = 166/302 (54%), Gaps = 60/302 (19%)
Frame = -2
Query: 1282 HTCTYSLCKGCIQEAEF-----TQGFCRRCM------EKNEHGNKEM--------DTGEY 1160
+TCTYSLCKGCI++A+ +GFC CM E NE GNKEM + EY
Sbjct: 176 YTCTYSLCKGCIKDADILCVRGNKGFCTTCMRTVLLVEDNERGNKEMAQVDFDDKSSWEY 235
Query: 1159 FNVIH------------------------------KEEPADRLFEAYADQVSNSRSYSEQ 1070
++ K E +D L++A D+ S+S S S
Sbjct: 236 LFKVYWIYLKGKLSLTLEELTRAKNPWKGAGLMARKGESSDELYDANDDKGSSSDSSSGH 295
Query: 1069 HEVISSATKKARRQ-----EGSSIEAIPRTDEGMP--VSNGTEWASNELLEFVSHMKHGD 911
E +S +K ++Q + +S+ + R+D+ + GTEWAS ELLE V HMK+GD
Sbjct: 296 QEANTSKRRKTKKQPKFLNKDNSLN-VGRSDDSKRTCLPEGTEWASKELLELVGHMKNGD 354
Query: 910 TSVLSYFDVQALLVEYIARNNLFVPHQKSRILCDSRLQRLFGKTCMGQFEMFKLLHSH-L 734
TSVLS FDVQALL+EYI RNNL P +KS+I+CD RL+ LFGK +G FEM KLL SH L
Sbjct: 355 TSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLLESHFL 414
Query: 733 MKKDNHADHI-QGRLFDANRSQIEV--SSEPLRKVIPDKLAKIIKTGGHALPETNYDDCA 563
+K+ + AD I +G + D SQ++ +++ +I DK K K G P+TN D+ A
Sbjct: 415 IKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQTNLDEYA 474
Query: 562 AI 557
AI
Sbjct: 475 AI 476
Score = 90.5 bits (223), Expect = 9e-16
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Frame = -2
Query: 496 ERTDGSSWNREIDDPQINNWDKVRNQVP-----------------------ASETVQASL 386
ER SS N+ D N W+K RNQV ASET +L
Sbjct: 870 EREKESSQNQGGDAYGSNCWEKPRNQVDPIGSVTGGCTNQAVVRSGLSSGVASETSTTTL 929
Query: 385 VS--------TRDRLWCYQDPSGKIQGPFSILQLCKWSTTASFPANLRIWRTMEMQEDSI 230
+ D++W YQDP+GKIQGPF ++QL KWS FP +LRIWR E Q+DSI
Sbjct: 930 STGTVLSANNENDKIWHYQDPAGKIQGPFGMVQLRKWSANGFFPPHLRIWRMNEKQDDSI 989
Query: 229 LLIDALNTTFSRAQKVAAAYEDESVNGCKGIDSSLTRTDNQQIDLTWDSDLKGAIGLASC 50
LL DA+N + +++ + + S R ++ + WD L G++
Sbjct: 990 LLTDAMNLQY---------HKEPPLQNNSLLQSQQVRVVSKDRENNWDGGLNGSMNATWI 1040
Query: 49 NLEAGKSDGLSSE 11
+ + G S++
Sbjct: 1041 GNKLNEGPGNSND 1053
>emb|CBI17411.3| unnamed protein product [Vitis vinifera]
Length = 1362
Score = 179 bits (455), Expect = 1e-42
Identities = 122/302 (40%), Positives = 166/302 (54%), Gaps = 60/302 (19%)
Frame = -2
Query: 1282 HTCTYSLCKGCIQEAEF-----TQGFCRRCM------EKNEHGNKEM--------DTGEY 1160
+TCTYSLCKGCI++A+ +GFC CM E NE GNKEM + EY
Sbjct: 176 YTCTYSLCKGCIKDADILCVRGNKGFCTTCMRTVLLVEDNERGNKEMAQVDFDDKSSWEY 235
Query: 1159 FNVIH------------------------------KEEPADRLFEAYADQVSNSRSYSEQ 1070
++ K E +D L++A D+ S+S S S
Sbjct: 236 LFKVYWIYLKGKLSLTLEELTRAKNPWKGAGLMARKGESSDELYDANDDKGSSSDSSSGH 295
Query: 1069 HEVISSATKKARRQ-----EGSSIEAIPRTDEGMP--VSNGTEWASNELLEFVSHMKHGD 911
E +S +K ++Q + +S+ + R+D+ + GTEWAS ELLE V HMK+GD
Sbjct: 296 QEANTSKRRKTKKQPKFLNKDNSLN-VGRSDDSKRTCLPEGTEWASKELLELVGHMKNGD 354
Query: 910 TSVLSYFDVQALLVEYIARNNLFVPHQKSRILCDSRLQRLFGKTCMGQFEMFKLLHSH-L 734
TSVLS FDVQALL+EYI RNNL P +KS+I+CD RL+ LFGK +G FEM KLL SH L
Sbjct: 355 TSVLSQFDVQALLLEYIKRNNLRDPRRKSQIICDMRLRNLFGKARVGHFEMLKLLESHFL 414
Query: 733 MKKDNHADHI-QGRLFDANRSQIEV--SSEPLRKVIPDKLAKIIKTGGHALPETNYDDCA 563
+K+ + AD I +G + D SQ++ +++ +I DK K K G P+TN D+ A
Sbjct: 415 IKEHSRADDIMRGGVVDTLASQVDADENNDYQLMIIKDKKRKTRKKGDERGPQTNLDEYA 474
Query: 562 AI 557
AI
Sbjct: 475 AI 476
Score = 90.5 bits (223), Expect = 9e-16
Identities = 61/193 (31%), Positives = 88/193 (45%), Gaps = 31/193 (16%)
Frame = -2
Query: 496 ERTDGSSWNREIDDPQINNWDKVRNQVP-----------------------ASETVQASL 386
ER SS N+ D N W+K RNQV ASET +L
Sbjct: 790 EREKESSQNQGGDAYGSNCWEKPRNQVDPIGSVTGGCTNQAVVRSGLSSGVASETSTTTL 849
Query: 385 VS--------TRDRLWCYQDPSGKIQGPFSILQLCKWSTTASFPANLRIWRTMEMQEDSI 230
+ D++W YQDP+GKIQGPF ++QL KWS FP +LRIWR E Q+DSI
Sbjct: 850 STGTVLSANNENDKIWHYQDPAGKIQGPFGMVQLRKWSANGFFPPHLRIWRMNEKQDDSI 909
Query: 229 LLIDALNTTFSRAQKVAAAYEDESVNGCKGIDSSLTRTDNQQIDLTWDSDLKGAIGLASC 50
LL DA+N + +++ + + S R ++ + WD L G++
Sbjct: 910 LLTDAMNLQY---------HKEPPLQNNSLLQSQQVRVVSKDRENNWDGGLNGSMNATWI 960
Query: 49 NLEAGKSDGLSSE 11
+ + G S++
Sbjct: 961 GNKLNEGPGNSND 973
>emb|CBI37995.3| unnamed protein product [Vitis vinifera]
Length = 868
Score = 168 bits (425), Expect = 3e-39
Identities = 117/302 (38%), Positives = 150/302 (49%), Gaps = 59/302 (19%)
Frame = -2
Query: 1279 TCTYSLCKGCIQEAEF-----TQGFCRRCM------EKNEHGNKEMDTGEYFNVIH---- 1145
TC +SLCK CI+++ +GFC CM EKNE GNKEMD ++ +
Sbjct: 182 TCPFSLCKNCIKDSVIFCVRENKGFCEACMKIIMLIEKNEQGNKEMDQVDFDDKSSWEFL 241
Query: 1144 ----------------------------------KEEPADRLFEAYADQVSNSRSYSEQH 1067
K+E D + Y D S S S
Sbjct: 242 FKDYWIDLKGRLSLTSDELAQAKNPWKGSDAPAGKQEAPDEPNDVYNDGGPGSDSSSGNV 301
Query: 1066 EVISSATKKARR-------QEGSSIEAIPRTDEGMPVSNGTEWASNELLEFVSHMKHGDT 908
E +KA++ + S A EG TEWAS ELLEFV HMK+GD
Sbjct: 302 EARKPKRRKAKKRLKSLNKERDSPSVATAIGAEGTSTPANTEWASKELLEFVMHMKNGDK 361
Query: 907 SVLSYFDVQALLVEYIARNNLFVPHQKSRILCDSRLQRLFGKTCMGQFEMFKLLHSH-LM 731
SV S FDVQALL+EYI RN L P +KS+I+CDSRL+ LFGK +G FEM KLL SH L
Sbjct: 362 SVTSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLEYLFGKPRVGHFEMLKLLESHFLN 421
Query: 730 KKDNHADHIQGRLFDANRSQIEV--SSEPLRKVIPDKLAKIIKTGGHALPETNYDDCAAI 557
K+D+ D +QG + D+ SQ+EV +++ L KV D+ K K G ++N DD AAI
Sbjct: 422 KEDSQTDDLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGSQSNLDDYAAI 481
Query: 556 VI 551
I
Sbjct: 482 DI 483
Score = 81.6 bits (200), Expect = 4e-13
Identities = 35/62 (56%), Positives = 47/62 (75%)
Frame = -2
Query: 394 ASLVSTRDRLWCYQDPSGKIQGPFSILQLCKWSTTASFPANLRIWRTMEMQEDSILLIDA 215
A+ +S D++W YQDPSG++QGPFS++QL KWS + FP +LRIWRT E Q+DS LL D
Sbjct: 800 AAKLSETDKMWHYQDPSGRVQGPFSLVQLRKWSNSGFFPKDLRIWRTTEKQDDSALLTDV 859
Query: 214 LN 209
+
Sbjct: 860 FH 861
>ref|XP_002313011.1| predicted protein [Populus trichocarpa] gi|222849419|gb|EEE86966.1|
predicted protein [Populus trichocarpa]
Length = 408
Score = 168 bits (425), Expect = 3e-39
Identities = 113/299 (37%), Positives = 151/299 (50%), Gaps = 57/299 (19%)
Frame = -2
Query: 1282 HTCTYSLCKGCIQEAEF-----TQGFCRRCM------EKNEHGNKEM------------- 1175
+TCT+SLCKGCI++A +GFC CM E+NE GNKE
Sbjct: 3 YTCTFSLCKGCIKDAVILCVRGNKGFCETCMKTVMLIERNEQGNKETGQVDFDDKSSWEF 62
Query: 1174 -------DTGEYFNVIH------------------KEEPADRLFEAYADQVSNSRSYSEQ 1070
D E ++ K+E AD L++ + + SE
Sbjct: 63 LFKDYWTDLKERLSLTPEELAQAKNPWKGSDSHAGKQELADELYDVHNGGSGSGPDSSEN 122
Query: 1069 HEVISSATKKARRQEGSSIEAIPRTDE-----GMPVSNGTEWASNELLEFVSHMKHGDTS 905
EV +S +K +++ S + G EWAS ELLEFV H+K+GD S
Sbjct: 123 AEVTTSKRRKPKKRLRSRAKERDSPGSSSWAGGESADESVEWASKELLEFVMHVKNGDKS 182
Query: 904 VLSYFDVQALLVEYIARNNLFVPHQKSRILCDSRLQRLFGKTCMGQFEMFKLLHSH-LMK 728
S FDVQALL+EYI RN L PH+KS+I+CDSRL+ LFGK +G FEM KLL SH L+K
Sbjct: 183 ACSQFDVQALLLEYIKRNKLRDPHRKSQIICDSRLENLFGKPRVGHFEMLKLLESHYLLK 242
Query: 727 KDNHADHIQGRLFDANRSQIEV--SSEPLRKVIPDKLAKIIKTGGHALPETNYDDCAAI 557
D+ AD +QG + D +Q+E +S+ L K DK + K G ++N DD AAI
Sbjct: 243 DDSQADDLQGSVVDTEANQLEADGNSDALMKASKDKRRRSRKKGEGRGLQSNIDDYAAI 301
>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
Length = 1421
Score = 165 bits (418), Expect = 2e-38
Identities = 116/309 (37%), Positives = 156/309 (50%), Gaps = 61/309 (19%)
Frame = -2
Query: 1300 GWR----CDR------HTCTYSLCKGCIQEAEF-----TQGFCRRCM------EKNEHGN 1184
GW C+R +TCT+SLCKGCI++ +GFC CM E+NE GN
Sbjct: 276 GWHLCSNCERNASYMCYTCTFSLCKGCIKDTVILCVRGNKGFCETCMRTVMLIEQNEQGN 335
Query: 1183 K-------EMDTGEYF-----------------------------NVIH-KEEPADRLFE 1115
+ ++ EY +++H KEE D +F+
Sbjct: 336 NVGQIDFDDRNSWEYLFKDYYIDIKEKLSLTFDELTQAKNPWKGSDMLHSKEESPDEIFD 395
Query: 1114 AYADQVSNSRSYSEQHEVISSATKKARRQEGSSIEAIPRTDEGMPVSNGTEWASNELLEF 935
A D+ S+S S E ++ S KKA+++ S + + +EWAS ELLEF
Sbjct: 396 ATNDRGSDSDSSYENADLSRSKRKKAKKRGKSRSKG----------DDSSEWASTELLEF 445
Query: 934 VSHMKHGDTSVLSYFDVQALLVEYIARNNLFVPHQKSRILCDSRLQRLFGKTCMGQFEMF 755
V HM++GD SVLS FDV LL+EYI RN L P +KS+I+CD+RLQ LFGK +G FE
Sbjct: 446 VMHMRNGDKSVLSQFDVHTLLLEYIKRNKLRDPRRKSQIICDARLQNLFGKPKVGHFETL 505
Query: 754 KLLHSH-LMKKDNHADHIQGRLFDANRSQIEVSSEP--LRKVIPDKLAKIIKTGGHALPE 584
KLL SH L+K D+ A+ +QG + D S +E P K DK K K G +
Sbjct: 506 KLLESHFLLKDDSQAEDLQGSVVDTEMSHLEGDGNPNSHTKAGKDKRRKNRKKGDERGLQ 565
Query: 583 TNYDDCAAI 557
TN DD AAI
Sbjct: 566 TNVDDYAAI 574
Score = 92.0 bits (227), Expect = 3e-16
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = -2
Query: 412 ASETVQASLVSTRDRLWCYQDPSGKIQGPFSILQLCKWSTTASFPANLRIWRTMEMQEDS 233
A T A ++ +++W YQDPSGK+QGPFS++QL KWS T FPA+LRIWRT E Q+DS
Sbjct: 854 AGITPPAVKINETEKMWHYQDPSGKVQGPFSMVQLHKWSNTGYFPADLRIWRTTEKQDDS 913
Query: 232 ILLIDALNTTFSRAQKV 182
ILL DAL FS+ +
Sbjct: 914 ILLTDALAGNFSKEPSI 930