BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015234
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinif...   231   1e-58
emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]   231   2e-58
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...   223   4e-56
ref|XP_002530951.1| conserved hypothetical protein [Ricinus comm...   214   3e-53
gb|AFK35084.1| unknown [Lotus japonicus]                              206   5e-51

>ref|XP_002273309.1| PREDICTED: F-box protein SKIP24 [Vitis vinifera]
           gi|296085868|emb|CBI31192.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  231 bits (590), Expect = 1e-58
 Identities = 123/245 (50%), Positives = 164/245 (66%), Gaps = 1/245 (0%)
 Frame = -3

Query: 933 LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTPNRXXX 754
           LPDE+W +I+ +GI ++ LTYKDLCC+SIS +RL++LSN   LWS LL+ DFP       
Sbjct: 4   LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPHTEASVS 63

Query: 753 XXXXXXXXXNPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIKVQ 574
                    +P L   IK             K AAHRRAV R+ESQI  H   L+EI+++
Sbjct: 64  NGTVSSSSLSPKLMYRIK------FDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 573 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 394
           L +E EK+K  ++EL NL +VR ASVA+NVWQPE++RG QK++V QCVVPV++R+  +EM
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVALNVWQPEVIRGWQKQMVGQCVVPVDARINALEM 177

Query: 393 EIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRDYGS-AEAVDECKGKTKRKKS 217
           E+++C+QQI   D  YR E RRLD AK +LV M YHPLRDY S +  VDEC   ++RKK 
Sbjct: 178 ELKLCRQQIAGSDNAYRNEKRRLDAAKERLVVMKYHPLRDYKSTSSGVDEC--NSQRKKL 235

Query: 216 KQCSE 202
           K+ S+
Sbjct: 236 KRGSD 240


>emb|CAN62570.1| hypothetical protein VITISV_029090 [Vitis vinifera]
          Length = 256

 Score =  231 bits (588), Expect = 2e-58
 Identities = 123/245 (50%), Positives = 163/245 (66%), Gaps = 1/245 (0%)
 Frame = -3

Query: 933 LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTPNRXXX 754
           LPDE+W +I+ +GI ++ LTYKDLCC+SIS +RL++LSN   LWS LL+ DFP       
Sbjct: 4   LPDEMWRQILEIGIRSSNLTYKDLCCVSISCRRLHRLSNDAVLWSFLLSSDFPHTEASVS 63

Query: 753 XXXXXXXXXNPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIKVQ 574
                    +P L   IK             K AAHRRAV R+ESQI  H   L+EI+++
Sbjct: 64  NGTVSSSSLSPKLMYRIK------FDRERARKAAAHRRAVLRLESQIAGHLRNLQEIQMK 117

Query: 573 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 394
           L +E EK+K  ++EL NL +VR ASVA+NVWQPE++RG QK++V QCVVPV++R+  +EM
Sbjct: 118 LTEETEKMKAAVTELPNLRKVRQASVALNVWQPEVIRGWQKQMVGQCVVPVDARINALEM 177

Query: 393 EIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRDYGS-AEAVDECKGKTKRKKS 217
           E+ +C+QQI   D  YR E RRLD AK +LV M YHPLRDY S +  VDEC   ++RKK 
Sbjct: 178 ELXLCRQQIAGXDNAYRNEKRRLDAAKERLVIMKYHPLRDYKSTSSGVDEC--NSQRKKL 235

Query: 216 KQCSE 202
           K+ S+
Sbjct: 236 KRGSD 240


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score =  223 bits (569), Expect = 4e-56
 Identities = 118/253 (46%), Positives = 166/253 (65%)
 Frame = -3

Query: 933 LPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTPNRXXX 754
           +PDE+W +I+ +GI N+KL YKDLCCISIS +RL++LS +++LW +LL+ DFP+PN+   
Sbjct: 4   VPDELWRQILEMGIQNSKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFPSPNQQNP 63

Query: 753 XXXXXXXXXNPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIKVQ 574
                      +     KS Y          K+AAHRRAV R ES++     K++EI+  
Sbjct: 64  NPNN-------STSASAKSTYKIKFEREKSRKVAAHRRAVLRKESEVLEFERKIREIENG 116

Query: 573 LMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGVEM 394
           L +E EK++   +EL NL +VR ASVA+NVWQPE++RG+QK++VEQ  VPVESRV  +EM
Sbjct: 117 LRQETEKMRATAAELSNLHKVRQASVALNVWQPEVIRGRQKQIVEQSAVPVESRVHSLEM 176

Query: 393 EIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRDYGSAEAVDECKGKTKRKKSK 214
           E+++C+Q+I   DK YR+E RRL+ A  +L SM YHPLRD+    + D+ + K KRKK K
Sbjct: 177 ELKLCRQRISGFDKAYRDEKRRLELATEQLASMKYHPLRDHKLINSGDK-EHKKKRKKLK 235

Query: 213 QCSEKFCSSGDKC 175
             +   C S   C
Sbjct: 236 --TSVICKSLKLC 246


>ref|XP_002530951.1| conserved hypothetical protein [Ricinus communis]
           gi|223529466|gb|EEF31423.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score =  214 bits (544), Expect = 3e-53
 Identities = 115/249 (46%), Positives = 162/249 (65%), Gaps = 2/249 (0%)
 Frame = -3

Query: 939 TALPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFP-TPNR 763
           + LPDE+W +II  GI ++  +YKDLCCISI  +RL++LSN+ + WS  L+ DFP +P +
Sbjct: 2   SGLPDELWRQIIEFGIRSSNFSYKDLCCISICCRRLHRLSNEHSFWSHFLSSDFPPSPQQ 61

Query: 762 XXXXXXXXXXXXNPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEI 583
                         T     KS Y          K+AAHRRAV R ES+I     K+++I
Sbjct: 62  QQHQQNPNPNNYTSTA----KSTYKIRFEKEREKKVAAHRRAVLRKESEIMERERKIRDI 117

Query: 582 KVQLMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKG 403
           + +L +E++K++   +EL NL +VR ASVA+NVWQPE+VRG+QK++VEQCVV  ESRV  
Sbjct: 118 EYRLCQESDKMRDTANELSNLHKVRQASVALNVWQPEVVRGRQKQLVEQCVVSFESRVHS 177

Query: 402 VEMEIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRDYGSAE-AVDECKGKTKR 226
           +EME+++CKQQI   +K +R+E RRL++AK +L SM YHPL+DY S     +E   K K 
Sbjct: 178 LEMELKLCKQQIVGFNKAHRDEKRRLEKAKEELASMKYHPLQDYRSTSCGQNEYNKKKKF 237

Query: 225 KKSKQCSEK 199
           K+S +  EK
Sbjct: 238 KRSVKFPEK 246


>gb|AFK35084.1| unknown [Lotus japonicus]
          Length = 257

 Score =  206 bits (525), Expect = 5e-51
 Identities = 107/245 (43%), Positives = 159/245 (64%)
 Frame = -3

Query: 939 TALPDEIWSEIITLGINNTKLTYKDLCCISISSKRLNKLSNQDTLWSILLTLDFPTPNRX 760
           ++LP+E+W  I+ +G+ ++  TYKDLCCISIS +R ++LS+ D+LW+ LL+ DFP+    
Sbjct: 14  SSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPLLSSDFPS---- 69

Query: 759 XXXXXXXXXXXNPTLQLPIKSVYXXXXXXXXXXKIAAHRRAVYRIESQINVHTAKLKEIK 580
                      + +     KS+Y          +IAAH+R V R ESQ+  H+ KL+ I+
Sbjct: 70  ------LTPPSSSSTSPSAKSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRNIQ 123

Query: 579 VQLMKENEKLKMGLSELGNLERVRSASVAMNVWQPEIVRGKQKRVVEQCVVPVESRVKGV 400
            ++ +E+ K      EL +L R+R ASVA+NVWQPE+VRG+QK++VEQC VP ESR+  +
Sbjct: 124 TRVAEESIKAGETAVELSSLRRIRQASVALNVWQPEVVRGRQKQMVEQCAVPAESRIHAL 183

Query: 399 EMEIRVCKQQIKVLDKGYREELRRLDEAKRKLVSMVYHPLRDYGSAEAVDECKGKTKRKK 220
           EME+R+CKQQI  L+K +++E RRL+ AK +L SM YHPL+++       E +    RKK
Sbjct: 184 EMELRLCKQQIMGLEKYHKDEKRRLNIAKEELESMKYHPLQEHEPVSG-RENEHNVTRKK 242

Query: 219 SKQCS 205
           SK C+
Sbjct: 243 SKSCN 247