BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015227
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...    68   9e-10
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...    67   1e-09
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...    67   1e-09
ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein...    67   1e-09
ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein...    67   2e-09

>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
           gi|222833309|gb|EEE71786.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 1056

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -2

Query: 120 MIGALELKNDDWLKAKETLHAARETTDGKDFYSALSLGNW 1
           M+G LELKNDDW+KAKET  AA E TDGKD Y+ LSLGNW
Sbjct: 595 MLGDLELKNDDWVKAKETFRAASEATDGKDSYATLSLGNW 634


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1086

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -2

Query: 120 MIGALELKNDDWLKAKETLHAARETTDGKDFYSALSLGNW 1
           M+G LELKNDDW+KAKETL AA + T+GKD Y++LSLGNW
Sbjct: 594 MLGELELKNDDWVKAKETLRAASDATEGKDSYASLSLGNW 633


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
           gi|223544778|gb|EEF46294.1| tpr repeat nuclear
           phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -2

Query: 120 MIGALELKNDDWLKAKETLHAARETTDGKDFYSALSLGNW 1
           M+G LELKNDDW+KAKET  AA E TDGKD Y+ LSLGNW
Sbjct: 571 MLGDLELKNDDWVKAKETFRAASEATDGKDSYAILSLGNW 610


>ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1088

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = -2

Query: 120 MIGALELKNDDWLKAKETLHAARETTDGKDFYSALSLGNW 1
           M+G LELKNDDW+KAKETL  A + TDGKD Y+ LSLGNW
Sbjct: 597 MLGELELKNDDWVKAKETLRTASDATDGKDSYATLSLGNW 636


>ref|XP_004144025.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Cucumis
           sativus]
          Length = 1074

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = -2

Query: 120 MIGALELKNDDWLKAKETLHAARETTDGKDFYSALSLGNW 1
           M+G LELKNDDW++AKET  AA E TDGKD Y+ LSLGNW
Sbjct: 595 MLGELELKNDDWVRAKETFRAAGEATDGKDSYATLSLGNW 634