BLASTX nr result

ID: Coptis25_contig00015209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015209
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH37038.1| FRUITFULL-like MADS-box [Ranunculus sceleratus]        93   4e-17
gb|AAP83403.1| FRUITFULL-like MADS-box [Ranunculus bulbosus]           80   3e-13
gb|AAP83404.1| FRUITFULL-like MADS-box [Ranunculus bulbosus]           77   2e-12
gb|AEX60789.1| FUL-like protein [Dysosma pleiantha]                    72   7e-11
gb|ADC79705.1| FRUITFULL-like protein [Akebia trifoliata]              69   8e-10

>dbj|BAH37038.1| FRUITFULL-like MADS-box [Ranunculus sceleratus]
          Length = 204

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/90 (53%), Positives = 62/90 (68%)
 Frame = +1

Query: 1   ITDHQRKEKALQEENNNLKKQIKEKELTLSLCEQHDHVKNSASLPPTEAPPIPNSSGTQQ 180
           IT+ QR ++AL EEN+NLKKQ+KE ELTL+L EQ  HV++S  +   E  P  N+SGT Q
Sbjct: 110 ITELQRNDRALVEENSNLKKQVKEMELTLTLSEQQIHVESSPFVHVPEPLPAINTSGTSQ 169

Query: 181 PNGTEGEEGAAVCPQPKTMIPPWMRRFINE 270
            +GTEG E      Q K+++PPWM R INE
Sbjct: 170 SSGTEGGEVVVQPSQAKSLMPPWMLRHINE 199


>gb|AAP83403.1| FRUITFULL-like MADS-box [Ranunculus bulbosus]
          Length = 209

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 45/86 (52%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +1

Query: 1   ITDHQRKEKALQEENNNLKKQIKEKELTLSLCEQHDHVKNSASLP-PTEAPPIPNSSGTQ 177
           IT+ Q+ EKAL EEN  LKKQ KEKEL LSLCEQ + V+ S  +P P   P +  S  T 
Sbjct: 120 ITELQKNEKALLEENIXLKKQAKEKELALSLCEQLNPVERSPYVPLPDAVPALNTSEPTN 179

Query: 178 QPNGTEGEEGAAVCP-QPKTMIPPWM 252
           Q +G+ GEE     P Q KT++PPWM
Sbjct: 180 QSSGSXGEEEVXAQPSQTKTLMPPWM 205


>gb|AAP83404.1| FRUITFULL-like MADS-box [Ranunculus bulbosus]
          Length = 214

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
 Frame = +1

Query: 1   ITDHQRKEKALQEENNNLKKQIKEKELTLSLCEQHDHVKNSASLPPTEAPPIPNSSG-TQ 177
           I + Q+ EKAL EEN NLKKQ KEKEL LSLCEQ + V+ S  +P  +  P  N++G T 
Sbjct: 121 IIELQKNEKALLEENINLKKQAKEKELALSLCEQLNPVERSPYVPLPDXVPALNTNGPTN 180

Query: 178 QPNGT-----EGEEGAAVCPQPKTMIPPWM 252
           Q +G+      GEE  A  PQ KT +PPWM
Sbjct: 181 QSSGSGGXGGGGEEVVAQPPQTKTPMPPWM 210


>gb|AEX60789.1| FUL-like protein [Dysosma pleiantha]
          Length = 210

 Score = 72.0 bits (175), Expect = 7e-11
 Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
 Frame = +1

Query: 1   ITDHQRKEKALQEENNNLKKQIKEKELTLS-------LCEQHDHVK--NSASLPPTEAPP 153
           I++ QRKEKALQE+NN L K++KEKE  L+         EQ    K  NSAS   +++ P
Sbjct: 110 ISELQRKEKALQEQNNQLGKKLKEKEKALAQNAAQQGQWEQQSQSKSQNSASFLLSQSLP 169

Query: 154 IPNSSGTQQPNGTEG--EEGAAVCPQPKTMIPPWMRRFINE 270
             N  G  Q  GT G  EEGA +  +P T++PPWM R + E
Sbjct: 170 SLNIGGAYQARGTSGAAEEGARLQNRPNTLMPPWMLRHVKE 210


>gb|ADC79705.1| FRUITFULL-like protein [Akebia trifoliata]
          Length = 241

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1   ITDHQRKEKALQEENNNLKKQIKEKELTLSLCEQHDHVKNSASLPP---TEAPPIPNSSG 171
           I++ QRKEKALQE+NN L K++KEKE  L      +H     + PP   ++  P  N  G
Sbjct: 149 ISELQRKEKALQEQNNQLGKKLKEKEKALEQMGNLEHPNQGQNGPPFLLSQTLPSLNIGG 208

Query: 172 TQQPNGTEGEEGAAVCPQPK-TMIPPWMRRFINE 270
              P G  GE+ +A  P+P+ T++PPWM R +N+
Sbjct: 209 PHLPRGNGGEDESA-RPEPRHTLMPPWMLRHVNK 241


Top