BLASTX nr result
ID: Coptis25_contig00015204
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00015204 (224 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi... 69 2e-14 ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261... 66 4e-13 emb|CBI28799.3| unnamed protein product [Vitis vinifera] 66 4e-13 ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791... 64 6e-12 ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 62 2e-11 >ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis] gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative [Ricinus communis] Length = 977 Score = 68.9 bits (167), Expect(2) = 2e-14 Identities = 29/34 (85%), Positives = 33/34 (97%) Frame = -3 Query: 222 LLKKYGDDGIRVFCQRWRQVFVEALHPRFLPSGF 121 LLK+YGDDGIR FCQRWRQVFVEA+HPRFLP+G+ Sbjct: 895 LLKEYGDDGIREFCQRWRQVFVEAVHPRFLPAGW 928 Score = 35.0 bits (79), Expect(2) = 2e-14 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 128 LVSGDCFARGRRDLGEYSVYNPIKKST 48 L+ FA GRR+ GE+SVYNP K+++ Sbjct: 947 LIVSAVFASGRREFGEFSVYNPTKRAS 973 >ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera] Length = 936 Score = 66.2 bits (160), Expect(2) = 4e-13 Identities = 27/34 (79%), Positives = 32/34 (94%) Frame = -3 Query: 222 LLKKYGDDGIRVFCQRWRQVFVEALHPRFLPSGF 121 LLK+YG+DGIR FCQRWRQ FVEA+HPRFLP+G+ Sbjct: 825 LLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGW 858 Score = 33.1 bits (74), Expect(2) = 4e-13 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -1 Query: 116 DCFARGRRDLGEYSVYNPIKKS 51 D GRRD GE+SVYNP KK+ Sbjct: 859 DVMHSGRRDFGEFSVYNPDKKA 880 >emb|CBI28799.3| unnamed protein product [Vitis vinifera] Length = 935 Score = 66.2 bits (160), Expect(2) = 4e-13 Identities = 27/34 (79%), Positives = 32/34 (94%) Frame = -3 Query: 222 LLKKYGDDGIRVFCQRWRQVFVEALHPRFLPSGF 121 LLK+YG+DGIR FCQRWRQ FVEA+HPRFLP+G+ Sbjct: 874 LLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGW 907 Score = 33.1 bits (74), Expect(2) = 4e-13 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = -1 Query: 116 DCFARGRRDLGEYSVYNPIKKS 51 D GRRD GE+SVYNP KK+ Sbjct: 908 DVMHSGRRDFGEFSVYNPDKKA 929 >ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max] Length = 873 Score = 63.9 bits (154), Expect(2) = 6e-12 Identities = 26/34 (76%), Positives = 32/34 (94%) Frame = -3 Query: 222 LLKKYGDDGIRVFCQRWRQVFVEALHPRFLPSGF 121 LLK+YG+DGIR FCQRWRQVFV+A++PRFLP G+ Sbjct: 813 LLKEYGEDGIRAFCQRWRQVFVDAVNPRFLPGGW 846 Score = 31.2 bits (69), Expect(2) = 6e-12 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = -1 Query: 101 GRRDLGEYSVYNPIKKSTLTAT 36 GRRD G++SVYNP K+ +T Sbjct: 852 GRRDFGKFSVYNPDKRGAAAST 873 >ref|XP_004159228.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101225221 [Cucumis sativus] Length = 877 Score = 62.4 bits (150), Expect(2) = 2e-11 Identities = 26/34 (76%), Positives = 31/34 (91%) Frame = -3 Query: 222 LLKKYGDDGIRVFCQRWRQVFVEALHPRFLPSGF 121 LLK+YG+DGIR FCQRWRQVFV A+ PRFLP+G+ Sbjct: 814 LLKEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGW 847 Score = 31.2 bits (69), Expect(2) = 2e-11 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = -1 Query: 101 GRRDLGEYSVYNPIKKS 51 GRRD GE+S+YNP KK+ Sbjct: 853 GRRDFGEFSLYNPKKKA 869