BLASTX nr result

ID: Coptis25_contig00015181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015181
         (1335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE43836.1| tobamovirus multiplication 1 [Nicotiana tabacum]      427   e-117
ref|XP_004145105.1| PREDICTED: uncharacterized protein LOC101212...   423   e-116
ref|XP_002304922.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_002271487.1| PREDICTED: uncharacterized protein LOC100250...   418   e-114
ref|NP_001234306.1| tobamovirus multiplication 1 homolog 3 [Sola...   414   e-113

>dbj|BAE43836.1| tobamovirus multiplication 1 [Nicotiana tabacum]
          Length = 288

 Score =  427 bits (1099), Expect = e-117
 Identities = 209/287 (72%), Positives = 231/287 (80%)
 Frame = +1

Query: 22  MTRLTLNVSLAELGSFSNDWWNEINESTHWQDGIFYFLCAAYALVSIIALIQLIRIEVRV 201
           MTRL L  S  ++   + +WW++INES  WQDGIFY LCA+YALVS +ALIQLIRIE+RV
Sbjct: 1   MTRLPLGSSSIDIAGPTTNWWDQINESVQWQDGIFYSLCASYALVSAVALIQLIRIELRV 60

Query: 202 PEFGWTTQKVFHLMNFIVNGVRAVLFGFHMHVFLFKPKVXXXXXXXXXXXXFFSTYTLLV 381
           PE+GWTTQKVFHLMNF+VNGVRA++FGFH  VFLF PKV            FFST+TLLV
Sbjct: 61  PEYGWTTQKVFHLMNFVVNGVRAIVFGFHKQVFLFHPKVLSLAILDLPGLLFFSTFTLLV 120

Query: 382 LFWAEIYRQARSLPTDKLKIMYISVNGGVYFIQVCLWIYLWINDNSVLETIGKIFIAVVS 561
           LFWAEIY QARSLPTDKL+I YIS+NG +YFIQ C+W+YLW NDNS +E IGKIFIAVVS
Sbjct: 121 LFWAEIYHQARSLPTDKLRISYISINGAIYFIQACIWVYLWSNDNSTVEFIGKIFIAVVS 180

Query: 562 FIAAXXXXXXXXXXXXXXXXXPIESKGRRKKLHEVGSVTAICFTCFVIRCFVVALSAFDM 741
           FIAA                 PIESKGRRKKLHEVGSVTAICFTCF+I CFVV LSAFD 
Sbjct: 181 FIAALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGSVTAICFTCFLISCFVVVLSAFDP 240

Query: 742 DASLDVLDHPVLNLIYYMLAEILPSALVLYILRKLPPKRVSAQYHPI 882
           DASLDVLDHPVLNLIYY+L EILPSALVLYILRKLPPKRVSAQYHPI
Sbjct: 241 DASLDVLDHPVLNLIYYLLVEILPSALVLYILRKLPPKRVSAQYHPI 287


>ref|XP_004145105.1| PREDICTED: uncharacterized protein LOC101212327 [Cucumis sativus]
           gi|449471719|ref|XP_004153389.1| PREDICTED:
           uncharacterized protein LOC101221964 [Cucumis sativus]
          Length = 289

 Score =  423 bits (1088), Expect = e-116
 Identities = 210/289 (72%), Positives = 234/289 (80%), Gaps = 1/289 (0%)
 Frame = +1

Query: 22  MTRLTLNVSLA-ELGSFSNDWWNEINESTHWQDGIFYFLCAAYALVSIIALIQLIRIEVR 198
           MTRL LN++   E+G  ++ WWN+INEST WQD IFY LCA YALVS +ALIQLIRIE+R
Sbjct: 1   MTRLQLNLTTTMEMGVTASSWWNDINESTFWQDRIFYSLCAVYALVSAVALIQLIRIELR 60

Query: 199 VPEFGWTTQKVFHLMNFIVNGVRAVLFGFHMHVFLFKPKVXXXXXXXXXXXXFFSTYTLL 378
           VPE+GWTTQKVFHLMNFIVNGVRA++FG H  VFL +PKV            FFSTYTLL
Sbjct: 61  VPEYGWTTQKVFHLMNFIVNGVRAIVFGLHKQVFLLQPKVLLLLLLELPGLLFFSTYTLL 120

Query: 379 VLFWAEIYRQARSLPTDKLKIMYISVNGGVYFIQVCLWIYLWINDNSVLETIGKIFIAVV 558
           VLFWAEIY QARSLPTDKL+ +YIS+N  +Y IQVC+WIY+ +NDNSV+E IGKIFIAVV
Sbjct: 121 VLFWAEIYHQARSLPTDKLRTVYISINSVIYLIQVCIWIYIGVNDNSVVEFIGKIFIAVV 180

Query: 559 SFIAAXXXXXXXXXXXXXXXXXPIESKGRRKKLHEVGSVTAICFTCFVIRCFVVALSAFD 738
           SFIAA                 PIESKGRRKKLHEVGSVTAICFTCF+IRCFVVALSAFD
Sbjct: 181 SFIAALGFLIYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVALSAFD 240

Query: 739 MDASLDVLDHPVLNLIYYMLAEILPSALVLYILRKLPPKRVSAQYHPIR 885
            DASLDVLDHP+LN IYY+L EILPSALVLYILRKLPPKR+SAQYHPIR
Sbjct: 241 ADASLDVLDHPLLNFIYYLLVEILPSALVLYILRKLPPKRISAQYHPIR 289


>ref|XP_002304922.1| predicted protein [Populus trichocarpa] gi|222847886|gb|EEE85433.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  423 bits (1087), Expect = e-116
 Identities = 203/286 (70%), Positives = 230/286 (80%)
 Frame = +1

Query: 28  RLTLNVSLAELGSFSNDWWNEINESTHWQDGIFYFLCAAYALVSIIALIQLIRIEVRVPE 207
           ++ + +   E+G+   DWW EINEST WQDGIFY LC AYALVS +ALIQLIRIE+RVPE
Sbjct: 6   KMPVELPAMEIGAMVGDWWEEINESTQWQDGIFYALCGAYALVSAVALIQLIRIELRVPE 65

Query: 208 FGWTTQKVFHLMNFIVNGVRAVLFGFHMHVFLFKPKVXXXXXXXXXXXXFFSTYTLLVLF 387
           +GWTTQKVFHLMNFIVNGVRA++FGFH  VF   P+             FFSTYTLLVLF
Sbjct: 66  YGWTTQKVFHLMNFIVNGVRAIVFGFHKQVFTMNPQALVLVLLDLPGLLFFSTYTLLVLF 125

Query: 388 WAEIYRQARSLPTDKLKIMYISVNGGVYFIQVCLWIYLWINDNSVLETIGKIFIAVVSFI 567
           WAEIY QARSLPTDKL+++YISVN  +YF+QVC+W+YLW++DNS++E IGKIFIAVVS +
Sbjct: 126 WAEIYHQARSLPTDKLRVVYISVNVAMYFVQVCIWVYLWVDDNSIVELIGKIFIAVVSIL 185

Query: 568 AAXXXXXXXXXXXXXXXXXPIESKGRRKKLHEVGSVTAICFTCFVIRCFVVALSAFDMDA 747
           AA                 PIESKGRRKKLHEVGSVTAICFTCF+IRCFVV LSAFD DA
Sbjct: 186 AALGFLVYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVFLSAFDADA 245

Query: 748 SLDVLDHPVLNLIYYMLAEILPSALVLYILRKLPPKRVSAQYHPIR 885
           SLDVLDHPVLNLIYYML EILPSALVL+ILRKLPPKR+SAQYHPIR
Sbjct: 246 SLDVLDHPVLNLIYYMLVEILPSALVLFILRKLPPKRISAQYHPIR 291


>ref|XP_002271487.1| PREDICTED: uncharacterized protein LOC100250291 [Vitis vinifera]
          Length = 289

 Score =  418 bits (1074), Expect = e-114
 Identities = 203/280 (72%), Positives = 226/280 (80%)
 Frame = +1

Query: 46  SLAELGSFSNDWWNEINESTHWQDGIFYFLCAAYALVSIIALIQLIRIEVRVPEFGWTTQ 225
           SL    + ++ WW++IN+S  WQDGIFY LC AYALVS +ALIQLIRIE+RVPE+GWTTQ
Sbjct: 10  SLTRFIALASSWWDKINDSATWQDGIFYALCGAYALVSSVALIQLIRIELRVPEYGWTTQ 69

Query: 226 KVFHLMNFIVNGVRAVLFGFHMHVFLFKPKVXXXXXXXXXXXXFFSTYTLLVLFWAEIYR 405
           KVFHLMNFIVNGVRA++FGFH  VF+  PKV            FFSTYTLLVLFWAEIY 
Sbjct: 70  KVFHLMNFIVNGVRAIVFGFHKQVFVLHPKVLILVLLDLPGLLFFSTYTLLVLFWAEIYH 129

Query: 406 QARSLPTDKLKIMYISVNGGVYFIQVCLWIYLWINDNSVLETIGKIFIAVVSFIAAXXXX 585
           QARSLPTDKL+I YIS+N  +YFIQVC+WIYLWI+DNSV+E IG IF+AV+SFIAA    
Sbjct: 130 QARSLPTDKLRIFYISINAAIYFIQVCIWIYLWIDDNSVVEFIGSIFMAVISFIAALGFL 189

Query: 586 XXXXXXXXXXXXXPIESKGRRKKLHEVGSVTAICFTCFVIRCFVVALSAFDMDASLDVLD 765
                        PIESKGRRKKLHEVGSVTAICFTCF+IRCFVV LSAFD DASLDVL 
Sbjct: 190 LYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVVLSAFDSDASLDVLS 249

Query: 766 HPVLNLIYYMLAEILPSALVLYILRKLPPKRVSAQYHPIR 885
           HP+LNLIYYML EILPSALVLYILRKLPPKR+SAQYHPIR
Sbjct: 250 HPILNLIYYMLVEILPSALVLYILRKLPPKRISAQYHPIR 289


>ref|NP_001234306.1| tobamovirus multiplication 1 homolog 3 [Solanum lycopersicum]
           gi|74038613|dbj|BAE43840.1| tobamovirus multiplication 1
           homolog 3 [Solanum lycopersicum]
          Length = 288

 Score =  414 bits (1065), Expect = e-113
 Identities = 202/287 (70%), Positives = 226/287 (78%)
 Frame = +1

Query: 22  MTRLTLNVSLAELGSFSNDWWNEINESTHWQDGIFYFLCAAYALVSIIALIQLIRIEVRV 201
           M RL L  S  ++     +WW+ +NES  WQDGIFY LCA+Y LVS +ALIQLIRI++RV
Sbjct: 1   MARLPLGSSPIDIAGPVTNWWDHVNESVQWQDGIFYSLCASYGLVSAVALIQLIRIDLRV 60

Query: 202 PEFGWTTQKVFHLMNFIVNGVRAVLFGFHMHVFLFKPKVXXXXXXXXXXXXFFSTYTLLV 381
           PE+GWTTQKVFHLMNF+VNGVRA++FGFH HVFL   KV            FFST+TLLV
Sbjct: 61  PEYGWTTQKVFHLMNFVVNGVRAIVFGFHKHVFLLHYKVLTLAILDLPGLLFFSTFTLLV 120

Query: 382 LFWAEIYRQARSLPTDKLKIMYISVNGGVYFIQVCLWIYLWINDNSVLETIGKIFIAVVS 561
           LFWAEIY QARSLPTDKL+I YI++N  +YFIQ C+W+YLWINDNS +E IGKIF+AVVS
Sbjct: 121 LFWAEIYHQARSLPTDKLRISYIAINDAIYFIQACIWVYLWINDNSTVEFIGKIFMAVVS 180

Query: 562 FIAAXXXXXXXXXXXXXXXXXPIESKGRRKKLHEVGSVTAICFTCFVIRCFVVALSAFDM 741
            IAA                 PIESKGRRKKLHEVGSVTAICFTCF+IRCFVV LSAFD 
Sbjct: 181 VIAALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCFVVVLSAFDS 240

Query: 742 DASLDVLDHPVLNLIYYMLAEILPSALVLYILRKLPPKRVSAQYHPI 882
           DASLDVLDHPVLNLIYY+L EILPSALVLYILRKLPPKRVSAQYHPI
Sbjct: 241 DASLDVLDHPVLNLIYYLLVEILPSALVLYILRKLPPKRVSAQYHPI 287


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