BLASTX nr result

ID: Coptis25_contig00015156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015156
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   662   0.0  
emb|CBI37089.3| unnamed protein product [Vitis vinifera]              662   0.0  
ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   662   0.0  
ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|2...   655   0.0  
ref|XP_004151977.1| PREDICTED: poly [ADP-ribose] polymerase 1-li...   645   0.0  

>ref|XP_003632422.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 2 [Vitis
            vinifera]
          Length = 992

 Score =  662 bits (1707), Expect = 0.0
 Identities = 325/408 (79%), Positives = 357/408 (87%), Gaps = 1/408 (0%)
 Frame = +3

Query: 3    KSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDIDYGXXXXXXXXXXXXXXXX 182
            KSDAIQEF+RLFLEK+GNPWEAWE+K+NF KQPG+FFPLDIDYG                
Sbjct: 584  KSDAIQEFKRLFLEKTGNPWEAWERKQNFQKQPGRFFPLDIDYGVNKQVSKKNNLSNVNS 643

Query: 183  LLDPQLVELMKMLFDVETYRTAMLEFEINMSEMPLGKLSKSNIQKGFEALTAIQNLLAGN 362
             L PQ+VELMKMLF+VETYR+AM+EFEINMSEMPLGKLSKSNIQKGFEALT IQNLL  N
Sbjct: 644  QLAPQVVELMKMLFNVETYRSAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLNSN 703

Query: 363  -HDHLMKESLLMNASNRFFTLIPSIHPHVIRDENDFKSKVKMLEALQDIEIASRLVGFDA 539
             HD   KESL+++ASNRFFT+IPSIHPHVIRDE+DFKSKVKMLEALQDIEIASRLVGFD 
Sbjct: 704  AHDPSFKESLIVDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDV 763

Query: 540  DSDDSLDENYKKLRCAITPLPHDSEDFQLVKNYLHATHAPTHKDWALELEDVFTLEREGE 719
            DSDDSLD+ YKKL C I PLPHDSE+++L++ YL  THAPTH DW LELE+VF+LEREGE
Sbjct: 764  DSDDSLDDKYKKLCCDIAPLPHDSEEYRLIEKYLLTTHAPTHMDWTLELEEVFSLEREGE 823

Query: 720  FDQFMPYREKLQNKMLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFADMVSK 899
            FD+F  YREKLQN+MLLWHGSRLTNFVGILSQGLRIAPPEAP TGYMFGKGVYFAD+VSK
Sbjct: 824  FDKFASYREKLQNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSK 883

Query: 900  SAQYCYTDKKNPVGLMLLSEVALGNVCELKKASYMDKPPRGKHSTKGLGKTIPQPSEYVK 1079
            SAQYCYTD+KNPVGLMLLSEVALG V EL+KA YMDKPP GKHSTKGLGK  PQ SEYVK
Sbjct: 884  SAQYCYTDRKNPVGLMLLSEVALGEVYELRKAMYMDKPPEGKHSTKGLGKKKPQDSEYVK 943

Query: 1080 WRDDVVVPCGKPVSSGVMASELQYNEFIVYDTAQVKMQFLLKVRFQHK 1223
            WRD+VVVPCGKPV S V ++EL YNE+IVY+TAQVKMQFLLKVRF HK
Sbjct: 944  WRDEVVVPCGKPVPSNVKSTELMYNEYIVYNTAQVKMQFLLKVRFHHK 991


>emb|CBI37089.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  662 bits (1707), Expect = 0.0
 Identities = 325/408 (79%), Positives = 357/408 (87%), Gaps = 1/408 (0%)
 Frame = +3

Query: 3    KSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDIDYGXXXXXXXXXXXXXXXX 182
            KSDAIQEF+RLFLEK+GNPWEAWE+K+NF KQPG+FFPLDIDYG                
Sbjct: 588  KSDAIQEFKRLFLEKTGNPWEAWERKQNFQKQPGRFFPLDIDYGVNKQVSKKNNLSNVNS 647

Query: 183  LLDPQLVELMKMLFDVETYRTAMLEFEINMSEMPLGKLSKSNIQKGFEALTAIQNLLAGN 362
             L PQ+VELMKMLF+VETYR+AM+EFEINMSEMPLGKLSKSNIQKGFEALT IQNLL  N
Sbjct: 648  QLAPQVVELMKMLFNVETYRSAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLNSN 707

Query: 363  -HDHLMKESLLMNASNRFFTLIPSIHPHVIRDENDFKSKVKMLEALQDIEIASRLVGFDA 539
             HD   KESL+++ASNRFFT+IPSIHPHVIRDE+DFKSKVKMLEALQDIEIASRLVGFD 
Sbjct: 708  AHDPSFKESLIVDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDV 767

Query: 540  DSDDSLDENYKKLRCAITPLPHDSEDFQLVKNYLHATHAPTHKDWALELEDVFTLEREGE 719
            DSDDSLD+ YKKL C I PLPHDSE+++L++ YL  THAPTH DW LELE+VF+LEREGE
Sbjct: 768  DSDDSLDDKYKKLCCDIAPLPHDSEEYRLIEKYLLTTHAPTHMDWTLELEEVFSLEREGE 827

Query: 720  FDQFMPYREKLQNKMLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFADMVSK 899
            FD+F  YREKLQN+MLLWHGSRLTNFVGILSQGLRIAPPEAP TGYMFGKGVYFAD+VSK
Sbjct: 828  FDKFASYREKLQNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSK 887

Query: 900  SAQYCYTDKKNPVGLMLLSEVALGNVCELKKASYMDKPPRGKHSTKGLGKTIPQPSEYVK 1079
            SAQYCYTD+KNPVGLMLLSEVALG V EL+KA YMDKPP GKHSTKGLGK  PQ SEYVK
Sbjct: 888  SAQYCYTDRKNPVGLMLLSEVALGEVYELRKAMYMDKPPEGKHSTKGLGKKKPQDSEYVK 947

Query: 1080 WRDDVVVPCGKPVSSGVMASELQYNEFIVYDTAQVKMQFLLKVRFQHK 1223
            WRD+VVVPCGKPV S V ++EL YNE+IVY+TAQVKMQFLLKVRF HK
Sbjct: 948  WRDEVVVPCGKPVPSNVKSTELMYNEYIVYNTAQVKMQFLLKVRFHHK 995


>ref|XP_002263185.1| PREDICTED: poly [ADP-ribose] polymerase 1-like isoform 1 [Vitis
            vinifera]
          Length = 984

 Score =  662 bits (1707), Expect = 0.0
 Identities = 325/408 (79%), Positives = 357/408 (87%), Gaps = 1/408 (0%)
 Frame = +3

Query: 3    KSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDIDYGXXXXXXXXXXXXXXXX 182
            KSDAIQEF+RLFLEK+GNPWEAWE+K+NF KQPG+FFPLDIDYG                
Sbjct: 576  KSDAIQEFKRLFLEKTGNPWEAWERKQNFQKQPGRFFPLDIDYGVNKQVSKKNNLSNVNS 635

Query: 183  LLDPQLVELMKMLFDVETYRTAMLEFEINMSEMPLGKLSKSNIQKGFEALTAIQNLLAGN 362
             L PQ+VELMKMLF+VETYR+AM+EFEINMSEMPLGKLSKSNIQKGFEALT IQNLL  N
Sbjct: 636  QLAPQVVELMKMLFNVETYRSAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLNSN 695

Query: 363  -HDHLMKESLLMNASNRFFTLIPSIHPHVIRDENDFKSKVKMLEALQDIEIASRLVGFDA 539
             HD   KESL+++ASNRFFT+IPSIHPHVIRDE+DFKSKVKMLEALQDIEIASRLVGFD 
Sbjct: 696  AHDPSFKESLIVDASNRFFTVIPSIHPHVIRDEDDFKSKVKMLEALQDIEIASRLVGFDV 755

Query: 540  DSDDSLDENYKKLRCAITPLPHDSEDFQLVKNYLHATHAPTHKDWALELEDVFTLEREGE 719
            DSDDSLD+ YKKL C I PLPHDSE+++L++ YL  THAPTH DW LELE+VF+LEREGE
Sbjct: 756  DSDDSLDDKYKKLCCDIAPLPHDSEEYRLIEKYLLTTHAPTHMDWTLELEEVFSLEREGE 815

Query: 720  FDQFMPYREKLQNKMLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFADMVSK 899
            FD+F  YREKLQN+MLLWHGSRLTNFVGILSQGLRIAPPEAP TGYMFGKGVYFAD+VSK
Sbjct: 816  FDKFASYREKLQNRMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSK 875

Query: 900  SAQYCYTDKKNPVGLMLLSEVALGNVCELKKASYMDKPPRGKHSTKGLGKTIPQPSEYVK 1079
            SAQYCYTD+KNPVGLMLLSEVALG V EL+KA YMDKPP GKHSTKGLGK  PQ SEYVK
Sbjct: 876  SAQYCYTDRKNPVGLMLLSEVALGEVYELRKAMYMDKPPEGKHSTKGLGKKKPQDSEYVK 935

Query: 1080 WRDDVVVPCGKPVSSGVMASELQYNEFIVYDTAQVKMQFLLKVRFQHK 1223
            WRD+VVVPCGKPV S V ++EL YNE+IVY+TAQVKMQFLLKVRF HK
Sbjct: 936  WRDEVVVPCGKPVPSNVKSTELMYNEYIVYNTAQVKMQFLLKVRFHHK 983


>ref|XP_002302058.1| predicted protein [Populus trichocarpa] gi|222843784|gb|EEE81331.1|
            predicted protein [Populus trichocarpa]
          Length = 996

 Score =  655 bits (1690), Expect = 0.0
 Identities = 323/408 (79%), Positives = 356/408 (87%), Gaps = 1/408 (0%)
 Frame = +3

Query: 3    KSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDIDYGXXXXXXXXXXXXXXXX 182
            KSDAI EF+RLFLEK+GNPWEAWEQKK+F K+PG+FFPLDIDYG                
Sbjct: 588  KSDAIHEFKRLFLEKTGNPWEAWEQKKDFQKKPGRFFPLDIDYGVNRQVTKKTRSDADSK 647

Query: 183  LLDPQLVELMKMLFDVETYRTAMLEFEINMSEMPLGKLSKSNIQKGFEALTAIQNLLAGN 362
            L  P LVELMKMLFDVETYR AM+EFEINMSEMPLGKLSK+NIQKGFEALT IQNLL+ N
Sbjct: 648  LAPP-LVELMKMLFDVETYRAAMVEFEINMSEMPLGKLSKNNIQKGFEALTEIQNLLSSN 706

Query: 363  -HDHLMKESLLMNASNRFFTLIPSIHPHVIRDENDFKSKVKMLEALQDIEIASRLVGFDA 539
             HD  +KESL+++ASNRFFT+IPSIHPH IRDE+DFKSKVKMLEALQDIEIASRLVGFD 
Sbjct: 707  AHDPSIKESLIIDASNRFFTVIPSIHPHAIRDEDDFKSKVKMLEALQDIEIASRLVGFDV 766

Query: 540  DSDDSLDENYKKLRCAITPLPHDSEDFQLVKNYLHATHAPTHKDWALELEDVFTLEREGE 719
            DSDDSLD+ YKKL C I PLPHDSED+QL++ YL  THAPTH DW+LELE+VF LER GE
Sbjct: 767  DSDDSLDDKYKKLHCDICPLPHDSEDYQLIEKYLLTTHAPTHTDWSLELEEVFLLERRGE 826

Query: 720  FDQFMPYREKLQNKMLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFADMVSK 899
            FD+F  YRE L+N+MLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFAD+VSK
Sbjct: 827  FDRFARYRETLKNRMLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFADLVSK 886

Query: 900  SAQYCYTDKKNPVGLMLLSEVALGNVCELKKASYMDKPPRGKHSTKGLGKTIPQPSEYVK 1079
            SAQYC+TDKKNPVGLMLLSEVALG V ELKKA+YM+KPP GKHSTKGLGK +P+ S YVK
Sbjct: 887  SAQYCFTDKKNPVGLMLLSEVALGEVYELKKATYMEKPPEGKHSTKGLGKKVPEESGYVK 946

Query: 1080 WRDDVVVPCGKPVSSGVMASELQYNEFIVYDTAQVKMQFLLKVRFQHK 1223
            WR+DV+VPCGKPVSS V ASEL YNE+IVY+TAQVKMQFLLKVRF HK
Sbjct: 947  WRNDVIVPCGKPVSSKVKASELMYNEYIVYNTAQVKMQFLLKVRFHHK 994


>ref|XP_004151977.1| PREDICTED: poly [ADP-ribose] polymerase 1-like [Cucumis sativus]
            gi|449496917|ref|XP_004160262.1| PREDICTED: poly
            [ADP-ribose] polymerase 1-like [Cucumis sativus]
          Length = 980

 Score =  645 bits (1664), Expect = 0.0
 Identities = 313/408 (76%), Positives = 355/408 (87%), Gaps = 1/408 (0%)
 Frame = +3

Query: 3    KSDAIQEFRRLFLEKSGNPWEAWEQKKNFVKQPGKFFPLDIDYGXXXXXXXXXXXXXXXX 182
            KSDAI+EF+RLFLEK+GNPWEAWEQK NF KQPG+FFPLDIDYG                
Sbjct: 573  KSDAIREFKRLFLEKTGNPWEAWEQKLNFEKQPGRFFPLDIDYGVNKDMPKKPKNYPATK 632

Query: 183  LLDPQLVELMKMLFDVETYRTAMLEFEINMSEMPLGKLSKSNIQKGFEALTAIQNLLAGN 362
            L  PQL ELMKMLF+VETYR AM+EFEINMSEMPLGKLS+SNIQKGFEALT IQNLL  +
Sbjct: 633  LA-PQLAELMKMLFNVETYRAAMMEFEINMSEMPLGKLSRSNIQKGFEALTEIQNLLNSS 691

Query: 363  -HDHLMKESLLMNASNRFFTLIPSIHPHVIRDENDFKSKVKMLEALQDIEIASRLVGFDA 539
             HD  MKESL+++ASNRFFT+IPSIHPH+IRDE+DFKSK+KMLEALQDIEIASRLVGFD 
Sbjct: 692  VHDPYMKESLIIDASNRFFTVIPSIHPHIIRDEDDFKSKLKMLEALQDIEIASRLVGFDG 751

Query: 540  DSDDSLDENYKKLRCAITPLPHDSEDFQLVKNYLHATHAPTHKDWALELEDVFTLEREGE 719
            DS +SLD+ YKKL C I P+ H+SED++L++ YL  THAPTH DWALELE+VF+LEREGE
Sbjct: 752  DSHESLDDKYKKLHCDIAPISHESEDYKLIEKYLLNTHAPTHTDWALELEEVFSLEREGE 811

Query: 720  FDQFMPYREKLQNKMLLWHGSRLTNFVGILSQGLRIAPPEAPTTGYMFGKGVYFADMVSK 899
            FD+F+P+R+KL+NKMLLWHGSRLTNFVGILSQGLRIAPPEAP TGYMFGKG+YFAD+VSK
Sbjct: 812  FDKFVPFRQKLKNKMLLWHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSK 871

Query: 900  SAQYCYTDKKNPVGLMLLSEVALGNVCELKKASYMDKPPRGKHSTKGLGKTIPQPSEYVK 1079
            SAQYCYTD+ NP+G M+LSEVALG V ELKKA YM+KPPRGKHSTKGLGK +P   E+VK
Sbjct: 872  SAQYCYTDRNNPIGFMILSEVALGEVYELKKAEYMEKPPRGKHSTKGLGKKVPAALEHVK 931

Query: 1080 WRDDVVVPCGKPVSSGVMASELQYNEFIVYDTAQVKMQFLLKVRFQHK 1223
            W++DVVVPCGKPV+S V ASEL YNE+IVYDTAQVKMQFLLKVRF HK
Sbjct: 932  WKEDVVVPCGKPVASNVKASELMYNEYIVYDTAQVKMQFLLKVRFHHK 979


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