BLASTX nr result

ID: Coptis25_contig00015142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015142
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540900.1| PREDICTED: auxin-induced protein X10A-like [...    81   2e-13
ref|XP_003604019.1| Auxin-induced protein 6B [Medicago truncatul...    80   4e-13
ref|XP_002272387.1| PREDICTED: indole-3-acetic acid-induced prot...    77   2e-12
emb|CAN62606.1| hypothetical protein VITISV_016867 [Vitis vinifera]    77   2e-12
ref|XP_004147010.1| PREDICTED: auxin-induced protein X10A-like [...    77   3e-12

>ref|XP_003540900.1| PREDICTED: auxin-induced protein X10A-like [Glycine max]
          Length = 92

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = -3

Query: 130 VPKGHIGIYVGVSQQKRFVVPISYLNHPLFLDLLNQAEEEFGF 2
           VPKGH+ +YVG  Q+KRFVVPISYLNHPLFLDLLN+AEEEFGF
Sbjct: 24  VPKGHVAVYVGELQKKRFVVPISYLNHPLFLDLLNRAEEEFGF 66


>ref|XP_003604019.1| Auxin-induced protein 6B [Medicago truncatula]
           gi|355493067|gb|AES74270.1| Auxin-induced protein 6B
           [Medicago truncatula]
          Length = 104

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = -3

Query: 130 VPKGHIGIYVGVSQQKRFVVPISYLNHPLFLDLLNQAEEEFGF 2
           VPKGH+ +YVG +Q+KRFVVPISYLNHP FLDLLN+AEEEFGF
Sbjct: 34  VPKGHVAVYVGEAQKKRFVVPISYLNHPSFLDLLNRAEEEFGF 76


>ref|XP_002272387.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like isoform 1
           [Vitis vinifera]
          Length = 100

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 130 VPKGHIGIYVGVSQQKRFVVPISYLNHPLFLDLLNQAEEEFGF 2
           VPKGH  +YVG SQ+KRFV+PISYLNHPLF DLL++AEEEFGF
Sbjct: 32  VPKGHFAVYVGESQKKRFVIPISYLNHPLFQDLLHRAEEEFGF 74


>emb|CAN62606.1| hypothetical protein VITISV_016867 [Vitis vinifera]
          Length = 75

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = -3

Query: 130 VPKGHIGIYVGVSQQKRFVVPISYLNHPLFLDLLNQAEEEFGF 2
           VPKGH  +YVG SQ+KRFV+PISYLNHPLF DLL++AEEEFGF
Sbjct: 7   VPKGHFAVYVGESQKKRFVIPISYLNHPLFQDLLHRAEEEFGF 49


>ref|XP_004147010.1| PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]
           gi|449516379|ref|XP_004165224.1| PREDICTED:
           auxin-induced protein X10A-like [Cucumis sativus]
          Length = 97

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
 Frame = -3

Query: 211 MAFGLPAII-SRPKXXXXXXXXXXXXLIVPKGHIGIYVGVSQQKRFVVPISYLNHPLFLD 35
           M F LP+I+ S  +              VPKGHI +YVG  Q+KRF+VPISYLNHP FLD
Sbjct: 1   MGFRLPSILFSAKQILKAQSISGRCQSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLD 60

Query: 34  LLNQAEEEFGF 2
           LL +AEEEFGF
Sbjct: 61  LLRRAEEEFGF 71


Top