BLASTX nr result

ID: Coptis25_contig00015128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015128
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [S...    77   1e-12
dbj|BAJ86690.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group] gi...    69   4e-10
emb|CAA38906.1| Tam3-transposase [Antirrhinum majus] gi|3219237|...    69   4e-10
gb|ACX85638.1| putative transposase [Cucumis melo]                     69   4e-10

>ref|XP_002455637.1| hypothetical protein SORBIDRAFT_03g015311 [Sorghum bicolor]
           gi|241927612|gb|EES00757.1| hypothetical protein
           SORBIDRAFT_03g015311 [Sorghum bicolor]
          Length = 558

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
 Frame = -1

Query: 376 LIHFSFTQYAARREIMRWIVKKKIPFTTVKGTEFEMMIRKSLCP*FVKFSLNTIR--YCQ 203
           L ++ F Q  +R+ ++ +IV +++PF+ V    FE  I  +L P F   S  T+      
Sbjct: 24  LKNWKFDQEVSRKAMVNFIVLQELPFSLVDHAPFEKFIA-TLNPWFTIVSRTTVAEDIMS 82

Query: 202 NLHKVKR*VKVSLRNWNGRICLASDLWTSNENIAYCAITVQFIDLEWKLIKIIVCFAQID 23
           +    +  ++ +++N N R+CL +DLWTSN+N+ Y  IT  FID +W L K I+ F  + 
Sbjct: 83  SYEDRRLALRETIKNSNSRVCLTADLWTSNQNLGYLCITCHFIDNDWMLQKRIIGFGLVA 142

Query: 22  YPHMG 8
            PH G
Sbjct: 143 SPHDG 147


>dbj|BAJ86690.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 331

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
 Frame = -1

Query: 367 FSFTQYAARREIMRWIVKKKIPFTTVKGTEFEMMIRKSLCP*FVKFSLNTIRY-CQNLHK 191
           ++F Q  ARRE+MR IV  ++ F+ V+   F   +  SL P F      T++  C    K
Sbjct: 204 WTFNQALARRELMRMIVLHELAFSLVEYDGFRRFV-SSLNPNFKMICRKTVKDDCMKAFK 262

Query: 190 V-KR*VKVSLRNWNGRICLASDLWTSNENIAYCAITVQFIDLEWKLIKIIVCFA 32
             KR ++   +N   +I L +DLWTSN+ I Y  IT  FID EWK  K IV FA
Sbjct: 263 EEKRILQGMFKNSKSKISLTTDLWTSNQTIGYICITAHFIDEEWKPQKRIVKFA 316


>emb|CAE05040.1| OSJNBa0049H08.1 [Oryza sativa Japonica Group]
           gi|38346748|emb|CAD40758.2| OSJNBa0081G05.11 [Oryza
           sativa Japonica Group] gi|116309610|emb|CAH66665.1|
           OSIGBa0110B10.2 [Oryza sativa Indica Group]
          Length = 557

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = -1

Query: 367 FSFTQYAARREIMRWIVKKKIPFTTVKGTEFEMMIRKSLCP*FVKFSLNTIRY-CQNLH- 194
           F F    +R  ++R+ +  ++PF  ++   F   + +S+ P F      T+R    NL+ 
Sbjct: 139 FVFVPKRSRELMVRFFIHAEVPFKKIEDPYFLEWV-ESMQPTFKVVGRQTLRDDAFNLYE 197

Query: 193 KVKR*VKVSLRNWNGRICLASDLWTSNENIAYCAITVQFIDLEWKLIKIIVCFAQIDYPH 14
           +++  +   L N +  ICL SD+WTS +NI Y  +T  +ID E+ + K I+ F ++ YPH
Sbjct: 198 RMREDLHAELHNLDLHICLTSDMWTSIQNIGYMVVTAHYIDREFNIKKKIISFKELKYPH 257

Query: 13  MG 8
           MG
Sbjct: 258 MG 259


>emb|CAA38906.1| Tam3-transposase [Antirrhinum majus] gi|3219237|dbj|BAA28817.1|
           transposase [Antirrhinum majus]
           gi|3219239|dbj|BAA28818.1| transposase [Antirrhinum
           majus] gi|3219241|dbj|BAA28819.1| transposase
           [Antirrhinum majus] gi|3219244|dbj|BAA28820.1|
           transposase [Antirrhinum majus]
           gi|3219249|dbj|BAA28821.1| transposase [Antirrhinum
           majus] gi|3219251|dbj|BAA28822.1| transposase
           [Antirrhinum majus] gi|3219256|dbj|BAA28823.1|
           transposase [Antirrhinum majus]
           gi|3219259|dbj|BAA28824.1| transposase [Antirrhinum
           majus] gi|12060255|dbj|BAB20481.1| Tam3 transposase
           [Antirrhinum majus]
          Length = 749

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/132 (31%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
 Frame = -1

Query: 391 RPNG*LIHFSFTQYAARREIMRWIVKKKIPFTTVKGTEFEMMIRKSLCP*FVKFSLNTIR 212
           +P+G +  + + Q   R  + ++IV+ ++PF+  +   FE  ++K++   F K S  T  
Sbjct: 185 QPDGTMAPWRYDQNYMRICLAQFIVQNELPFSFAQNELFENFLQKAVQCKFKKISRATC- 243

Query: 211 YCQNLHKVKR*VKV---SLRNWNGRICLASDLWTSNENIAYCAITVQFIDLEWKLIKIIV 41
           +   + + ++ + V     +N+NGRI L SDLW  + +  +  IT  +ID +W + K I+
Sbjct: 244 FRDGVKQYEKEIIVLRNEFKNFNGRISLTSDLWQGSGSYHFSCITAHWIDKDWIMRKRII 303

Query: 40  CFAQIDYPHMGD 5
            FAQ+D PH GD
Sbjct: 304 EFAQLDSPHNGD 315


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
 Frame = -1

Query: 376 LIHFSFTQYAARREIMRWIVKKKIPFTTVKGTEFEMMIRKSLCP*FVKFSLNTI-RYCQN 200
           L+  SFTQ   R+ + R ++  ++PF  V+   F    R +L P FV  S  T+ + C  
Sbjct: 97  LMTASFTQENCRKMLARMVILDELPFKFVESEGFHQFCR-ALNPKFVIPSRVTVAKDCFQ 155

Query: 199 LH-KVKR*VKVSLRNWNGRICLASDLWTSNENIAYCAITVQFIDLEWKLIKIIVCFAQID 23
           ++ K K+ +K +L     R+CL +D WTS +NI Y  IT  FID +W L K I+ F Q+ 
Sbjct: 156 MYMKEKKKLKNALTRSGQRVCLTTDTWTSVQNINYMVITAHFIDDDWNLHKRILNFCQV- 214

Query: 22  YPHMGD 5
             H GD
Sbjct: 215 ANHKGD 220


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