BLASTX nr result

ID: Coptis25_contig00015127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015127
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30819.3| unnamed protein product [Vitis vinifera]               70   3e-10
ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245...    67   4e-09
ref|XP_003532782.1| PREDICTED: uncharacterized protein LOC100803...    62   7e-08
ref|XP_004162612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    62   1e-07
ref|XP_004134562.1| PREDICTED: uncharacterized protein LOC101211...    62   1e-07

>emb|CBI30819.3| unnamed protein product [Vitis vinifera]
          Length = 799

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 60/219 (27%), Positives = 89/219 (40%), Gaps = 28/219 (12%)
 Frame = -2

Query: 574  SGLQQAYANXXXXXXXXXXXXXLRDSE--YSSVNMVPTRDRIPRNAIPSINSPAISMQER 401
            S + QAY N              R+S+  YS   +  +      NA+ SI+   IS+ E 
Sbjct: 490  SSVMQAYTNSLPSNLLASTVPPARESDLPYSPFPITQSMSTKYSNAVSSISGSTISVTEA 549

Query: 400  VHPGVFAQSELNPQ-------------------------PNLSSGKLAEMVDNPFSPQRN 296
            +  G F+  +  PQ                         P L  G  A M+  PF PQ  
Sbjct: 550  LKTGSFSTPQPTPQTLPSTSVATGPALPQHLPPVHPYSQPGLPLGHFANMIGYPFLPQSY 609

Query: 295  SYMSSAFQKRSMGNSHTYQSPTVAHDTGIEHLLSQLRNSGSTXXXXXXXXXXXXXXXXXX 116
            +YM SA+Q+   GNS  +QS        +  +L Q +NS S                   
Sbjct: 610  TYMPSAYQQAFAGNSTYHQS--------LAAVLPQYKNSVSVSSLPQSAAIASGYGAFGS 661

Query: 115  SADVPGSFRQYLPSSPASSTIDHYDLI-SQYRDNNNFVS 2
            S  +PG+F    P++ A +TI + D+I SQY+D N+ +S
Sbjct: 662  STSIPGNFSLNPPTAAAGTTIGYDDVINSQYKDGNHLIS 700


>ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245196 [Vitis vinifera]
          Length = 866

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 54/193 (27%), Positives = 80/193 (41%), Gaps = 26/193 (13%)
 Frame = -2

Query: 502  DSEYSSVNMVPTRDRIPRNAIPSINSPAISMQERVHPGVFAQSELNPQ------------ 359
            D  YS   +  +      NA+ SI+   IS+ E +  G F+  +  PQ            
Sbjct: 583  DLPYSPFPITQSMSTKYSNAVSSISGSTISVTEALKTGSFSTPQPTPQTLPSTSVATGPA 642

Query: 358  -------------PNLSSGKLAEMVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHD 218
                         P L  G  A M+  PF PQ  +YM SA+Q+   GNS  +QS      
Sbjct: 643  LPQHLPPVHPYSQPGLPLGHFANMIGYPFLPQSYTYMPSAYQQAFAGNSTYHQS------ 696

Query: 217  TGIEHLLSQLRNSGSTXXXXXXXXXXXXXXXXXXSADVPGSFRQYLPSSPASSTIDHYDL 38
              +  +L Q +NS S                   S  +PG+F    P++ A +TI + D+
Sbjct: 697  --LAAVLPQYKNSVSVSSLPQSAAIASGYGAFGSSTSIPGNFSLNPPTAAAGTTIGYDDV 754

Query: 37   I-SQYRDNNNFVS 2
            I SQY+D N+ +S
Sbjct: 755  INSQYKDGNHLIS 767


>ref|XP_003532782.1| PREDICTED: uncharacterized protein LOC100803908 [Glycine max]
          Length = 837

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 4/170 (2%)
 Frame = -2

Query: 499  SEYSSVNMVPTRDRIPRNAIPSIN---SPAISMQERVHPGVFAQSELNPQPNLSSGKLAE 329
            SE    N + T    P+ A+P  N    PA+     VHP          QP L  G  A 
Sbjct: 586  SEALRANNISTPQPNPQ-ALPGANVATGPALPQHLAVHP--------YSQPTLPLGHFAN 636

Query: 328  MVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHDTGIEHLLSQLRNSGSTXXXXXXX 149
            M+   F PQ  +YM SAFQ+   GNS  +QS        +  +L Q +NS S        
Sbjct: 637  MIGYQFLPQSYTYMPSAFQQAFPGNSTYHQS--------LAAMLPQYKNSISVSSLPQSA 688

Query: 148  XXXXXXXXXXXSADVPGSFRQYLPSSPASSTIDHYDLI-SQYRDNNNFVS 2
                       ++   G++    P++P S+TI + D+I SQY+DNN+ +S
Sbjct: 689  AVASGYGFGSSTSIPGGNYPLNPPAAPTSTTIGYDDVINSQYKDNNHMIS 738


>ref|XP_004162612.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101224560
            [Cucumis sativus]
          Length = 844

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
 Frame = -2

Query: 502  DSEYSSVNMVPTRDRIPR--NAIPSINSPAISMQERVHPGVFAQSELNPQPNLSSGK--- 338
            D +YS     P    +P+  NA  SI  P++SM E +       S+  PQ N+++G    
Sbjct: 568  DPQYSPF---PDTQSVPKYSNAASSITGPSMSMPEVLRTSSITTSQPTPQSNVAAGPAVP 624

Query: 337  -----------------LAEMVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHDTGI 209
                              A M+  PF PQ  +YM S FQ+   GNS  +Q+        +
Sbjct: 625  QHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQA--------L 676

Query: 208  EHLLSQLRNSGSTXXXXXXXXXXXXXXXXXXSADVPGSFRQYLPSSPASSTIDHYDLI-S 32
              +L Q +NS S                   ++   G+F    P++PA S+I + D I S
Sbjct: 677  AAVLPQYKNSISVSSLPQSAAIASGYGFGSSTSIPGGNFPLNPPTAPAGSSIGYEDAISS 736

Query: 31   QYRDNNNFVS 2
            QY+D+N+ +S
Sbjct: 737  QYKDSNHLLS 746


>ref|XP_004134562.1| PREDICTED: uncharacterized protein LOC101211388 [Cucumis sativus]
          Length = 845

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 23/190 (12%)
 Frame = -2

Query: 502  DSEYSSVNMVPTRDRIPR--NAIPSINSPAISMQERVHPGVFAQSELNPQPNLSSGK--- 338
            D +YS     P    +P+  NA  SI  P++SM E +       S+  PQ N+++G    
Sbjct: 569  DPQYSPF---PDTQSVPKYSNAASSITGPSMSMPEVLRTSSITTSQPTPQSNVAAGPAVP 625

Query: 337  -----------------LAEMVDNPFSPQRNSYMSSAFQKRSMGNSHTYQSPTVAHDTGI 209
                              A M+  PF PQ  +YM S FQ+   GNS  +Q+        +
Sbjct: 626  QHLAVHPYSQPTLPLGHFANMIGYPFLPQSYTYMPSGFQQAFAGNSTYHQA--------L 677

Query: 208  EHLLSQLRNSGSTXXXXXXXXXXXXXXXXXXSADVPGSFRQYLPSSPASSTIDHYDLI-S 32
              +L Q +NS S                   ++   G+F    P++PA S+I + D I S
Sbjct: 678  AAVLPQYKNSISVSSLPQSAAIASGYGFGSSTSIPGGNFPLNPPTAPAGSSIGYEDAISS 737

Query: 31   QYRDNNNFVS 2
            QY+D+N+ +S
Sbjct: 738  QYKDSNHLLS 747


Top