BLASTX nr result

ID: Coptis25_contig00015125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015125
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001144370.1| uncharacterized protein LOC100277288 [Zea ma...    61   2e-07
gb|ACN33586.1| unknown [Zea mays] gi|413938189|gb|AFW72740.1| hy...    60   4e-07
gb|AFW90627.1| hypothetical protein [Solanum tuberosum]                60   5e-07
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    57   4e-06

>ref|NP_001144370.1| uncharacterized protein LOC100277288 [Zea mays]
           gi|195641072|gb|ACG40004.1| hypothetical protein [Zea
           mays]
          Length = 352

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +2

Query: 425 MSSLNWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLP 604
           M+++ WS+LP ELL +IA RIN + D  RF  VC SWRS   +    P     PPWL+LP
Sbjct: 1   MAAMGWSDLPSELLTDIAGRINELADIARFRSVCSSWRSAARDAAAAP--PPQPPWLLLP 58


>gb|ACN33586.1| unknown [Zea mays] gi|413938189|gb|AFW72740.1| hypothetical protein
           ZEAMMB73_143172 [Zea mays]
          Length = 352

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +2

Query: 425 MSSLNWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLP 604
           M+++ WS+LP ELL +IA RIN + D  RF  VC SWRS   +    P     PPWL+LP
Sbjct: 1   MAAMGWSDLPSELLTDIAGRINELADIARFRSVCSSWRSAARDAVAAP--PPQPPWLLLP 58


>gb|AFW90627.1| hypothetical protein [Solanum tuberosum]
          Length = 248

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 31/70 (44%), Positives = 44/70 (62%)
 Frame = +2

Query: 437 NWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLPEKKI 616
           +WSEL  +LLV I + +N IED++ FG VC SW SV   K ++   L   PWLML E++ 
Sbjct: 3   DWSELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVA-TKANFNNDLCRAPWLMLAEEED 61

Query: 617 GKDRSFCNLF 646
            + R F +L+
Sbjct: 62  NEVRKFFSLY 71


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 27/66 (40%), Positives = 43/66 (65%)
 Frame = +2

Query: 437  NWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLPEKKI 616
            +WS++P++ L  IA++++S+ED+VRFG VC SW S+    +      +  PWLML EK+ 
Sbjct: 921  DWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSI-FEDKECCCPSSKSPWLMLAEKEN 979

Query: 617  GKDRSF 634
             + R F
Sbjct: 980  SEIRGF 985


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