BLASTX nr result
ID: Coptis25_contig00015125
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00015125 (653 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001144370.1| uncharacterized protein LOC100277288 [Zea ma... 61 2e-07 gb|ACN33586.1| unknown [Zea mays] gi|413938189|gb|AFW72740.1| hy... 60 4e-07 gb|AFW90627.1| hypothetical protein [Solanum tuberosum] 60 5e-07 emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 57 4e-06 >ref|NP_001144370.1| uncharacterized protein LOC100277288 [Zea mays] gi|195641072|gb|ACG40004.1| hypothetical protein [Zea mays] Length = 352 Score = 60.8 bits (146), Expect = 2e-07 Identities = 29/60 (48%), Positives = 37/60 (61%) Frame = +2 Query: 425 MSSLNWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLP 604 M+++ WS+LP ELL +IA RIN + D RF VC SWRS + P PPWL+LP Sbjct: 1 MAAMGWSDLPSELLTDIAGRINELADIARFRSVCSSWRSAARDAAAAP--PPQPPWLLLP 58 >gb|ACN33586.1| unknown [Zea mays] gi|413938189|gb|AFW72740.1| hypothetical protein ZEAMMB73_143172 [Zea mays] Length = 352 Score = 60.1 bits (144), Expect = 4e-07 Identities = 29/60 (48%), Positives = 37/60 (61%) Frame = +2 Query: 425 MSSLNWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLP 604 M+++ WS+LP ELL +IA RIN + D RF VC SWRS + P PPWL+LP Sbjct: 1 MAAMGWSDLPSELLTDIAGRINELADIARFRSVCSSWRSAARDAVAAP--PPQPPWLLLP 58 >gb|AFW90627.1| hypothetical protein [Solanum tuberosum] Length = 248 Score = 59.7 bits (143), Expect = 5e-07 Identities = 31/70 (44%), Positives = 44/70 (62%) Frame = +2 Query: 437 NWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLPEKKI 616 +WSEL +LLV I + +N IED++ FG VC SW SV K ++ L PWLML E++ Sbjct: 3 DWSELQLDLLVSIGRCLNLIEDYLNFGRVCKSWHSVA-TKANFNNDLCRAPWLMLAEEED 61 Query: 617 GKDRSFCNLF 646 + R F +L+ Sbjct: 62 NEVRKFFSLY 71 >emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] Length = 1290 Score = 56.6 bits (135), Expect = 4e-06 Identities = 27/66 (40%), Positives = 43/66 (65%) Frame = +2 Query: 437 NWSELPEELLVEIAKRINSIEDFVRFGVVCHSWRSVTLNKRHYPLILNTPPWLMLPEKKI 616 +WS++P++ L IA++++S+ED+VRFG VC SW S+ + + PWLML EK+ Sbjct: 921 DWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSI-FEDKECCCPSSKSPWLMLAEKEN 979 Query: 617 GKDRSF 634 + R F Sbjct: 980 SEIRGF 985