BLASTX nr result

ID: Coptis25_contig00015100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015100
         (1328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27664.3| unnamed protein product [Vitis vinifera]              329   9e-88
ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...   329   9e-88
ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...   329   9e-88
ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-bin...   328   2e-87
gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]        318   3e-84

>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  329 bits (844), Expect = 9e-88
 Identities = 164/294 (55%), Positives = 206/294 (70%)
 Frame = +1

Query: 4    RCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLESRFCQQCSRFHDMMEFDEKKR 183
            RCQVEGCN DLS++KDYHR+HRVCE+H+KCP+V+V GLE RFCQQCSRFH + EFDEKKR
Sbjct: 127  RCQVEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKR 186

Query: 184  SCRRRLSDHNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWE 363
            SCRRRLSDHNARRRK QP+GIQ NS RL SSFY  +Q MSL+ + VP+ HTRP  NP+WE
Sbjct: 187  SCRRRLSDHNARRRKPQPEGIQSNSARL-SSFYGGKQQMSLVLSSVPIVHTRPAVNPSWE 245

Query: 364  ATCCIKPEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQ 543
             TC    + K  ++R      I+ +L+L  + L + I  +  DS RLL  KG+  EVL+Q
Sbjct: 246  GTCSKFTQTK-GLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQ 304

Query: 544  GLEAPVTASNLNVAPDFRRALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQ 723
            GL   + +SNL+ + D RRALSLLS N W S   +P   D  M+ N TSM    MHAV Q
Sbjct: 305  GLGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQ 364

Query: 724  GWSLGSAEYWQTEQQPVDTQVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 885
            G    ++E+W+TE    D++VH + SQ     HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 365  GMLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN 418


>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
            vinifera]
          Length = 477

 Score =  329 bits (844), Expect = 9e-88
 Identities = 164/294 (55%), Positives = 206/294 (70%)
 Frame = +1

Query: 4    RCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLESRFCQQCSRFHDMMEFDEKKR 183
            RCQVEGCN DLS++KDYHR+HRVCE+H+KCP+V+V GLE RFCQQCSRFH + EFDEKKR
Sbjct: 186  RCQVEGCNLDLSTAKDYHRKHRVCESHTKCPKVIVGGLERRFCQQCSRFHSLSEFDEKKR 245

Query: 184  SCRRRLSDHNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTWE 363
            SCRRRLSDHNARRRK QP+GIQ NS RL SSFY  +Q MSL+ + VP+ HTRP  NP+WE
Sbjct: 246  SCRRRLSDHNARRRKPQPEGIQSNSARL-SSFYGGKQQMSLVLSSVPIVHTRPAVNPSWE 304

Query: 364  ATCCIKPEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVLSQ 543
             TC    + K  ++R      I+ +L+L  + L + I  +  DS RLL  KG+  EVL+Q
Sbjct: 305  GTCSKFTQTK-GLVRPGNTGGIDRQLHLPGSELQNGISTLCHDSSRLLHSKGAIAEVLNQ 363

Query: 544  GLEAPVTASNLNVAPDFRRALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAVPQ 723
            GL   + +SNL+ + D RRALSLLS N W S   +P   D  M+ N TSM    MHAV Q
Sbjct: 364  GLGDSMISSNLDTSQDLRRALSLLSTNSWGSCETQPIPSDHPMHVNQTSMPQSIMHAVSQ 423

Query: 724  GWSLGSAEYWQTEQQPVDTQVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 885
            G    ++E+W+TE    D++VH + SQ     HFQEF+LFKAP+ESG+ S Q+N
Sbjct: 424  GMLHSTSEHWRTELPSTDSRVHILPSQGDGNTHFQEFKLFKAPYESGFSSGQLN 477


>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
            gi|223545956|gb|EEF47459.1| LIGULELESS1 protein, putative
            [Ricinus communis]
          Length = 483

 Score =  329 bits (844), Expect = 9e-88
 Identities = 165/298 (55%), Positives = 208/298 (69%), Gaps = 3/298 (1%)
 Frame = +1

Query: 1    PRCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLESRFCQQCSRFHDMMEFDEKK 180
            PRCQVEGCN DLSS+KDYHR+HRVCE HSKCP+V+VAGLE RFCQQCSRFH + EFDEKK
Sbjct: 186  PRCQVEGCNLDLSSAKDYHRKHRVCENHSKCPKVIVAGLERRFCQQCSRFHGLSEFDEKK 245

Query: 181  RSCRRRLSDHNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTW 360
            RSCRRRLSDHNARRRK QP+ IQ NS RLSSS YD R  MSL++NR PL H R  AN  W
Sbjct: 246  RSCRRRLSDHNARRRKPQPESIQMNSARLSSSSYDERPHMSLVWNRAPLVHARANANLAW 305

Query: 361  EATCCIK-PEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGST--TE 531
            E T   K    KE V++  K+  I+G+L+L  N L ++IPL   +   LL  K      E
Sbjct: 306  EGTSSSKFTITKEYVLKPAKIGGIDGQLHLPANELTTSIPLHPHNCKSLLPSKAKVPIAE 365

Query: 532  VLSQGLEAPVTASNLNVAPDFRRALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMH 711
            VL+Q LE  + +SN++   D  RALSLLS N W S  P+  S ++    +HT M    +H
Sbjct: 366  VLNQDLEESIISSNVDATQDLHRALSLLSTNSWGSCEPKSFSHERPAQLSHTGMPQSVLH 425

Query: 712  AVPQGWSLGSAEYWQTEQQPVDTQVHSMASQISSGNHFQEFQLFKAPFESGYYSSQMN 885
            AVPQG  L S++YW+ EQ   +++VH++ SQ  S ++FQEFQL +AP+++ +YSSQ+N
Sbjct: 426  AVPQGLPLTSSDYWRAEQHITNSRVHTLTSQNDSSSYFQEFQLLRAPYDNDFYSSQLN 483


>ref|XP_002267224.2| PREDICTED: LOW QUALITY PROTEIN: promoter-binding protein SPL10 [Vitis
            vinifera]
          Length = 506

 Score =  328 bits (841), Expect = 2e-87
 Identities = 161/283 (56%), Positives = 201/283 (71%), Gaps = 1/283 (0%)
 Frame = +1

Query: 1    PRCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLESRFCQQCSRFHDMMEFDEKK 180
            PRCQVEGCN DL S+KDYHRRHR+CE HSK P+V+VAGLE RFCQQCSRFH++ EFD+KK
Sbjct: 179  PRCQVEGCNLDLKSAKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKK 238

Query: 181  RSCRRRLSDHNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTW 360
            RSCRRRL+DHNARRR+  P+ IQF+S RL SS YD RQ ++L  NR+P+    PVA P W
Sbjct: 239  RSCRRRLNDHNARRRRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----PVATPMW 294

Query: 361  EATCCIK-PEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVL 537
            +  C  K  +   S++R VK   I+ +L+L  + +P AI ++H +S+R+LSF GST  VL
Sbjct: 295  QNPCSFKDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHGNSERMLSFDGSTPRVL 354

Query: 538  SQGLEAPVTASNLNVAPDFRRALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAV 717
            +QGLEA   ASN NVAPDFRRALSLLS N W   +P PTSLDQLM+ N TSMA P MHA 
Sbjct: 355  NQGLEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQTSMAQPTMHAE 414

Query: 718  PQGWSLGSAEYWQTEQQPVDTQVHSMASQISSGNHFQEFQLFK 846
            P  W+L S+E    +Q P +T+ HS+    +    F+ F   K
Sbjct: 415  PHNWALASSENMHVQQTPSETRGHSLDLHNNEAACFKSFNYLK 457


>gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]
          Length = 500

 Score =  318 bits (814), Expect = 3e-84
 Identities = 157/283 (55%), Positives = 198/283 (69%), Gaps = 1/283 (0%)
 Frame = +1

Query: 1    PRCQVEGCNFDLSSSKDYHRRHRVCETHSKCPRVVVAGLESRFCQQCSRFHDMMEFDEKK 180
            PRCQVEGCN DL S+KDYHRRHR+CE HSK P+V+VAGLE RFCQQCSRFH++ EFD+KK
Sbjct: 173  PRCQVEGCNLDLKSAKDYHRRHRICENHSKSPKVIVAGLERRFCQQCSRFHELTEFDDKK 232

Query: 181  RSCRRRLSDHNARRRKQQPDGIQFNSDRLSSSFYDTRQPMSLMFNRVPLGHTRPVANPTW 360
            RS RRRL+DHNARRR+  P+ IQF+S RL SS YD RQ ++L  NR+P+    PVA P W
Sbjct: 233  RSRRRRLNDHNARRRRPHPESIQFSSGRLPSSLYDGRQQINLACNRLPI----PVATPMW 288

Query: 361  EATCCIK-PEAKESVMRSVKVERINGKLNLSNNNLPSAIPLMHRDSDRLLSFKGSTTEVL 537
            +  C  K  +   S++R VK   I+ +L+L  + +P AI ++H +S+R+LSF GST  VL
Sbjct: 289  QNPCSFKDTQTGGSLIRPVKAVGIDKQLHLPTDEMPDAISMLHVNSERMLSFDGSTPRVL 348

Query: 538  SQGLEAPVTASNLNVAPDFRRALSLLSNNPWRSGNPEPTSLDQLMNANHTSMAHPAMHAV 717
            +QGLEA   ASN NVAPDFRRALSLLS N W   +P PTSLDQLM+ N +SMA P MH  
Sbjct: 349  NQGLEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQSSMAQPTMHVE 408

Query: 718  PQGWSLGSAEYWQTEQQPVDTQVHSMASQISSGNHFQEFQLFK 846
            P  W+L S+E    +Q P + + HS+    +    F+ F   K
Sbjct: 409  PHNWALASSENMHVQQTPSEIRGHSLDLHNNEAACFKSFNYLK 451


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