BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00015091
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20322.3| unnamed protein product [Vitis vinifera]              451   e-124
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...   451   e-124
ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   441   e-121
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   437   e-120
ref|XP_002519054.1| pentatricopeptide repeat-containing protein,...   411   e-112

>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  451 bits (1160), Expect = e-124
 Identities = 223/323 (69%), Positives = 264/323 (81%), Gaps = 1/323 (0%)
 Frame = -2

Query: 1389 YINTGEYEKVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISM 1210
            YINT + EK+P +L+EM+ENG+ PDNFSYR+CINSYGARS+++ MEK+L EMES+SHI +
Sbjct: 183  YINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHI 242

Query: 1209 DWSTYATVANFYIKAGLTDKAVATLKKSEENLFKRDGLAYNYLISLYASLGNKAEVTRLW 1030
            DW TY+ VANFYIKAGL +KA+  LKK+E  L K D L YN+LISLYASLG+KAE+ RLW
Sbjct: 243  DWMTYSMVANFYIKAGLNEKALFFLKKAETKLHK-DPLGYNHLISLYASLGSKAEMMRLW 301

Query: 1029 ERKKIACKKYINVDYITMLGSLVKLGELEVAEKLLKEWESSGNSYDFRVPNVILIAYSKS 850
            ER+K A KK IN DYITMLGSLVKLGELE  E LLKEWESSGN YDFRVPN +LI + + 
Sbjct: 302  ERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQK 361

Query: 849  GLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAARCIKMAFSV-NENGGWKP 673
            GL EKAE+ML D+ E+GK P PNSW IVAAGY++K  MEKA  C+K A +V  EN GW+P
Sbjct: 362  GLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRP 421

Query: 672  NPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMNKNMYHALIKAKVRAGKDVDGLLDSM 493
             PKVISSILSWLGD  +VEEVE FV  LK  +PM++ MYHA I+A +RAGK+VDG+LDSM
Sbjct: 422  KPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDGILDSM 481

Query: 492  KTDKIDEDEETKKILSLKEDKAE 424
            K DKIDEDEET+KILSLK DKAE
Sbjct: 482  KADKIDEDEETRKILSLKHDKAE 504


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial [Vitis vinifera]
          Length = 504

 Score =  451 bits (1160), Expect = e-124
 Identities = 223/323 (69%), Positives = 264/323 (81%), Gaps = 1/323 (0%)
 Frame = -2

Query: 1389 YINTGEYEKVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISM 1210
            YINT + EK+P +L+EM+ENG+ PDNFSYR+CINSYGARS+++ MEK+L EMES+SHI +
Sbjct: 183  YINTDQLEKIPDVLSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHI 242

Query: 1209 DWSTYATVANFYIKAGLTDKAVATLKKSEENLFKRDGLAYNYLISLYASLGNKAEVTRLW 1030
            DW TY+ VANFYIKAGL +KA+  LKK+E  L K D L YN+LISLYASLG+KAE+ RLW
Sbjct: 243  DWMTYSMVANFYIKAGLNEKALFFLKKAETKLHK-DPLGYNHLISLYASLGSKAEMMRLW 301

Query: 1029 ERKKIACKKYINVDYITMLGSLVKLGELEVAEKLLKEWESSGNSYDFRVPNVILIAYSKS 850
            ER+K A KK IN DYITMLGSLVKLGELE  E LLKEWESSGN YDFRVPN +LI + + 
Sbjct: 302  ERRKTASKKLINRDYITMLGSLVKLGELEDTEALLKEWESSGNCYDFRVPNTLLIGFCQK 361

Query: 849  GLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAARCIKMAFSV-NENGGWKP 673
            GL EKAE+ML D+ E+GK P PNSW IVAAGY++K  MEKA  C+K A +V  EN GW+P
Sbjct: 362  GLIEKAESMLRDIVEEGKTPTPNSWSIVAAGYIEKQNMEKAFECMKEAIAVLAENKGWRP 421

Query: 672  NPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMNKNMYHALIKAKVRAGKDVDGLLDSM 493
             PKVISSILSWLGD  +VEEVE FV  LK  +PM++ MYHA I+A +RAGK+VDG+LDSM
Sbjct: 422  KPKVISSILSWLGDNRDVEEVETFVSALKAVIPMDREMYHAQIRASIRAGKEVDGILDSM 481

Query: 492  KTDKIDEDEETKKILSLKEDKAE 424
            K DKIDEDEET+KILSLK DKAE
Sbjct: 482  KADKIDEDEETRKILSLKHDKAE 504


>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
            mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  441 bits (1133), Expect = e-121
 Identities = 220/321 (68%), Positives = 257/321 (80%), Gaps = 1/321 (0%)
 Frame = -2

Query: 1389 YINTGEYEKVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISM 1210
            Y N G++EKVP +L EMK++ V PDNFSYRICINSYGA+S+I  ME VL EME Q HI M
Sbjct: 185  YTNVGQHEKVPDVLTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVM 244

Query: 1209 DWSTYATVANFYIKAGLTDKAVATLKKSEENLFKRDGLAYNYLISLYASLGNKAEVTRLW 1030
            DW+TYA  ANFYIKAGL DKA+  LKKSEE L KRDGL YN+LISLYASLGNKAEV RLW
Sbjct: 245  DWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLW 304

Query: 1029 ERKKIACKKYINVDYITMLGSLVKLGELEVAEKLLKEWESSGNSYDFRVPNVILIAYSKS 850
              +K ACK+ IN DYITML SLV+LGELE AEK+L+EWESSGN YDFRVPN+++I YS+ 
Sbjct: 305  SLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEK 364

Query: 849  GLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAARCIKMAFSVN-ENGGWKP 673
            GL EKAEAML++L EKGKI  PNSWG VA+GY+ + EMEKA  C+K A S++  N G KP
Sbjct: 365  GLFEKAEAMLKELMEKGKITTPNSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKP 424

Query: 672  NPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMNKNMYHALIKAKVRAGKDVDGLLDSM 493
            N +VI+ ILSWLGD   VE+VEAFVG L+  +PMN+ MYH LI A +RAGK+VDGLL SM
Sbjct: 425  NSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASM 484

Query: 492  KTDKIDEDEETKKILSLKEDK 430
            K DKI EDEETKKIL  K++K
Sbjct: 485  KADKIVEDEETKKILGTKQNK 505


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  437 bits (1125), Expect = e-120
 Identities = 219/321 (68%), Positives = 257/321 (80%), Gaps = 1/321 (0%)
 Frame = -2

Query: 1389 YINTGEYEKVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISM 1210
            Y N G++EKVP +L EMK++ V PDNFSYRICINSY A+S+I  MEKVL EME Q HI M
Sbjct: 185  YTNVGQHEKVPDVLTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVM 244

Query: 1209 DWSTYATVANFYIKAGLTDKAVATLKKSEENLFKRDGLAYNYLISLYASLGNKAEVTRLW 1030
            DW+TYA  ANFYIKAGL DKA+  LKKSEE L KRDGL YN+LISLYASLGNKAEV RLW
Sbjct: 245  DWNTYAVAANFYIKAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLW 304

Query: 1029 ERKKIACKKYINVDYITMLGSLVKLGELEVAEKLLKEWESSGNSYDFRVPNVILIAYSKS 850
              +K ACK+ IN DYITML SLV+LGELE AEK+L+EWESSGN YDFRVPN+++I YS+ 
Sbjct: 305  SLEKSACKRNINRDYITMLESLVRLGELEEAEKVLREWESSGNCYDFRVPNIVIIGYSEK 364

Query: 849  GLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAARCIKMAFSVN-ENGGWKP 673
            GL EKAEAML++L EKGKI  P+SWG VA+GY+ + EMEKA  C+K A S++  N G KP
Sbjct: 365  GLFEKAEAMLKELMEKGKITTPDSWGTVASGYMDEGEMEKAVECMKAAISLHVNNKGRKP 424

Query: 672  NPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMNKNMYHALIKAKVRAGKDVDGLLDSM 493
            N +VI+ ILSWLGD   VE+VEAFVG L+  +PMN+ MYH LI A +RAGK+VDGLL SM
Sbjct: 425  NSRVIAGILSWLGDKGRVEDVEAFVGSLRIVIPMNRRMYHTLIMANIRAGKEVDGLLASM 484

Query: 492  KTDKIDEDEETKKILSLKEDK 430
            K DKI EDEETKKIL  K++K
Sbjct: 485  KADKIVEDEETKKILGTKQNK 505


>ref|XP_002519054.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541717|gb|EEF43265.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 485

 Score =  411 bits (1057), Expect = e-112
 Identities = 201/319 (63%), Positives = 250/319 (78%), Gaps = 1/319 (0%)
 Frame = -2

Query: 1389 YINTGEYEKVPGLLNEMKENGVVPDNFSYRICINSYGARSNIDEMEKVLVEMESQSHISM 1210
            YIN G YEKV  +L EMKEN + PDNFSYRICINSYGARS+I  MEKVL EME +   +M
Sbjct: 160  YINLGLYEKVLHVLTEMKENKISPDNFSYRICINSYGARSDIQGMEKVLNEMECRLGNAM 219

Query: 1209 DWSTYATVANFYIKAGLTDKAVATLKKSEENLFKRDGLAYNYLISLYASLGNKAEVTRLW 1030
            DW+TYA VANFYIKAGL DKAV  L+KSEE L K+DG+ YN+LISLYA+LG K+EV R+W
Sbjct: 220  DWNTYAVVANFYIKAGLADKAVDALRKSEEKLDKKDGIGYNHLISLYATLGIKSEVLRIW 279

Query: 1029 ERKKIACKKYINVDYITMLGSLVKLGELEVAEKLLKEWESSGNSYDFRVPNVILIAYSKS 850
            + +K  CK+ IN D++TML SLVKLG+LE AEK+LKEWESSGN YD R+PN++++ YSK+
Sbjct: 280  DLQKSVCKRRINRDFVTMLESLVKLGDLEEAEKVLKEWESSGNFYDVRIPNIVVVGYSKN 339

Query: 849  GLTEKAEAMLEDLTEKGKIPIPNSWGIVAAGYVQKNEMEKAARCIKMAFSVN-ENGGWKP 673
            GL EKAEA LE L EKG+   PNSW ++A+GY++K E  KA  C+K AFS+N E  GWKP
Sbjct: 340  GLHEKAEASLEALMEKGRATTPNSWAMIASGYLEKGEKAKAFECMKAAFSLNVEKKGWKP 399

Query: 672  NPKVISSILSWLGDTCEVEEVEAFVGLLKDFVPMNKNMYHALIKAKVRAGKDVDGLLDSM 493
            NP+V+  IL WLGD    E+VEAFV  L   +P+N+ +YHAL+KAK+R+G+D   +LD M
Sbjct: 400  NPRVVMDILIWLGDEGSPEDVEAFVASLSVAIPLNRQIYHALLKAKIRSGRDAHEILDRM 459

Query: 492  KTDKIDEDEETKKILSLKE 436
            KTDKIDEDEETK+IL + +
Sbjct: 460  KTDKIDEDEETKEILGISK 478